RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
TMEM220-202ENST00000455996 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
TMEM220-202ENST00000455996 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
TMEM220-202ENST00000455996 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
TMEM220-202ENST00000455996 ADGRF5Q8IZF2 1346 aa22.71■■□□□ 1.23
TMEM220-202ENST00000455996 PIK3C2GO75747 1445 aa22.68■■□□□ 1.22
TMEM220-202ENST00000455996 TNRQ92752 1358 aa22.67■■□□□ 1.22
TMEM220-202ENST00000455996 WASHC2AQ641Q2 1341 aa22.66■■□□□ 1.22
TMEM220-202ENST00000455996 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
TMEM220-202ENST00000455996 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
TMEM220-202ENST00000455996 A2ML1A8K2U0 1454 aa22.65■■□□□ 1.22
TMEM220-202ENST00000455996 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
TMEM220-202ENST00000455996 KDM5AP29375 1690 aaKnown RBP22.63■■□□□ 1.21
TMEM220-202ENST00000455996 C11orf95C9JLR9 678 aaPredicted RBP22.63■■□□□ 1.21
TMEM220-202ENST00000455996 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
TMEM220-202ENST00000455996 C14orf93Q9H972 538 aaKnown RBP22.62■■□□□ 1.21
TMEM220-202ENST00000455996 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
TMEM220-202ENST00000455996 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
TMEM220-202ENST00000455996 SCAF11Q99590 1463 aaKnown RBP22.61■■□□□ 1.21
TMEM220-202ENST00000455996 C3P01024 1663 aa22.61■■□□□ 1.21
TMEM220-202ENST00000455996 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
TMEM220-202ENST00000455996 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
TMEM220-202ENST00000455996 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
TMEM220-202ENST00000455996 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
TMEM220-202ENST00000455996 CFAP70Q5T0N1 1121 aa22.6■■□□□ 1.21
TMEM220-202ENST00000455996 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.21
TMEM220-202ENST00000455996 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
TMEM220-202ENST00000455996 ADGRB1O14514 1584 aa22.57■■□□□ 1.2
TMEM220-202ENST00000455996 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
TMEM220-202ENST00000455996 TESK2Q96S53 571 aa22.55■■□□□ 1.2
TMEM220-202ENST00000455996 RIMS2Q9UQ26 1411 aa22.54■■□□□ 1.2
TMEM220-202ENST00000455996 CEBPAP49715 358 aaPredicted RBP22.54■■□□□ 1.2
TMEM220-202ENST00000455996 MIER1Q8N108 512 aa22.53■■□□□ 1.2
TMEM220-202ENST00000455996 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
TMEM220-202ENST00000455996 UBR1Q8IWV7 1749 aa22.52■■□□□ 1.2
TMEM220-202ENST00000455996 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.51■■□□□ 1.19
TMEM220-202ENST00000455996 RIMS1Q86UR5 1692 aaKnown RBP22.49■■□□□ 1.19
TMEM220-202ENST00000455996 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
TMEM220-202ENST00000455996 TMEM2Q9UHN6 1383 aa22.48■■□□□ 1.19
TMEM220-202ENST00000455996 MYO3AQ8NEV4 1616 aa22.47■■□□□ 1.19
TMEM220-202ENST00000455996 HDGFP51858 240 aaKnown RBP22.47■■□□□ 1.19
TMEM220-202ENST00000455996 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
TMEM220-202ENST00000455996 SBNO2Q9Y2G9 1366 aa22.45■■□□□ 1.18
TMEM220-202ENST00000455996 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
TMEM220-202ENST00000455996 ALKQ9UM73 1620 aa22.44■■□□□ 1.18
TMEM220-202ENST00000455996 ARHGAP23Q9P227 1491 aa22.44■■□□□ 1.18
TMEM220-202ENST00000455996 SLIT1O75093 1534 aa22.43■■□□□ 1.18
TMEM220-202ENST00000455996 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
TMEM220-202ENST00000455996 DISP3Q9P2K9 1392 aa22.43■■□□□ 1.18
TMEM220-202ENST00000455996 TMF1P82094 1093 aa22.42■■□□□ 1.18
TMEM220-202ENST00000455996 TMEM132EQ6IEE7 984 aa22.41■■□□□ 1.18
TMEM220-202ENST00000455996 NRXN3Q9Y4C0 1643 aa22.4■■□□□ 1.18
TMEM220-202ENST00000455996 PTPRMP28827 1452 aa22.4■■□□□ 1.18
TMEM220-202ENST00000455996 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.18
TMEM220-202ENST00000455996 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
TMEM220-202ENST00000455996 THEMISQ8N1K5 641 aaPredicted RBP22.37■■□□□ 1.17
TMEM220-202ENST00000455996 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
TMEM220-202ENST00000455996 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
TMEM220-202ENST00000455996 CEP170BQ9Y4F5 1589 aaPredicted RBP22.37■■□□□ 1.17
TMEM220-202ENST00000455996 CDCA8Q53HL2 280 aa22.36■■□□□ 1.17
TMEM220-202ENST00000455996 TRAK1Q9UPV9 953 aa22.36■■□□□ 1.17
TMEM220-202ENST00000455996 ARHGEF28Q8N1W1 1705 aaKnown RBP22.35■■□□□ 1.17
TMEM220-202ENST00000455996 ANP32CO43423 234 aa22.35■■□□□ 1.17
TMEM220-202ENST00000455996 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
TMEM220-202ENST00000455996 LRPPRCP42704 1394 aaKnown RBP22.33■■□□□ 1.17
TMEM220-202ENST00000455996 LTKP29376 864 aa22.33■■□□□ 1.17
TMEM220-202ENST00000455996 DLC1Q96QB1 1528 aa22.33■■□□□ 1.17
TMEM220-202ENST00000455996 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 EID1Q9Y6B2 187 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 SETD1BQ9UPS6 1966 aaKnown RBP22.31■■□□□ 1.16
TMEM220-202ENST00000455996 MED14O60244 1454 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 ABCC11Q96J66 1382 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 TXNDC2Q86VQ3 553 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 QRICH2Q9H0J4 1663 aa22.31■■□□□ 1.16
TMEM220-202ENST00000455996 CCER2I3L3R5 266 aa22.29■■□□□ 1.16
TMEM220-202ENST00000455996 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
TMEM220-202ENST00000455996 TECPR2O15040 1411 aa22.27■■□□□ 1.16
TMEM220-202ENST00000455996 METP08581 1390 aa22.27■■□□□ 1.16
TMEM220-202ENST00000455996 SIRT1Q96EB6 747 aa22.26■■□□□ 1.15
TMEM220-202ENST00000455996 STK26Q9P289 416 aa22.25■■□□□ 1.15
TMEM220-202ENST00000455996 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
TMEM220-202ENST00000455996 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
TMEM220-202ENST00000455996 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
TMEM220-202ENST00000455996 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
TMEM220-202ENST00000455996 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
TMEM220-202ENST00000455996 FAM135BQ49AJ0 1406 aa22.22■■□□□ 1.15
TMEM220-202ENST00000455996 TULP4Q9NRJ4 1543 aa22.22■■□□□ 1.15
TMEM220-202ENST00000455996 CPS1P31327 1500 aa22.21■■□□□ 1.15
TMEM220-202ENST00000455996 MYOM1P52179 1685 aa22.21■■□□□ 1.15
TMEM220-202ENST00000455996 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
TMEM220-202ENST00000455996 EVC2Q86UK5 1308 aa22.2■■□□□ 1.14
TMEM220-202ENST00000455996 PANK3Q9H999 370 aa22.18■■□□□ 1.14
TMEM220-202ENST00000455996 KTN1Q86UP2 1357 aaKnown RBP22.18■■□□□ 1.14
TMEM220-202ENST00000455996 ANKLE2Q86XL3 938 aa22.17■■□□□ 1.14
TMEM220-202ENST00000455996 BCANQ96GW7 911 aa22.17■■□□□ 1.14
TMEM220-202ENST00000455996 POGKQ9P215 609 aa22.17■■□□□ 1.14
TMEM220-202ENST00000455996 PIK3R4Q99570 1358 aa22.15■■□□□ 1.14
TMEM220-202ENST00000455996 PTPRUQ92729 1446 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms