RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 MSH6P52701 1360 aa20.47■□□□□ 0.87
PSMC4-202ENST00000455878 SLAIN2Q9P270 581 aa20.47■□□□□ 0.87
PSMC4-202ENST00000455878 TET3O43151 1660 aa20.47■□□□□ 0.87
PSMC4-202ENST00000455878 RPRD2Q5VT52 1461 aaKnown RBP20.46■□□□□ 0.87
PSMC4-202ENST00000455878 C14orf37Q86TY3 774 aa20.45■□□□□ 0.86
PSMC4-202ENST00000455878 RGS17Q9UGC6 210 aaPredicted RBP20.45■□□□□ 0.86
PSMC4-202ENST00000455878 XIRP1Q702N8 1843 aaKnown RBP20.44■□□□□ 0.86
PSMC4-202ENST00000455878 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
PSMC4-202ENST00000455878 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
PSMC4-202ENST00000455878 PLEKHG1Q9ULL1 1385 aa20.42■□□□□ 0.86
PSMC4-202ENST00000455878 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
PSMC4-202ENST00000455878 ITGAEP38570 1179 aa20.4■□□□□ 0.86
PSMC4-202ENST00000455878 NUTM2DQ5VT03 806 aaPredicted RBP20.4■□□□□ 0.86
PSMC4-202ENST00000455878 NKTRP30414 1462 aaKnown RBP20.4■□□□□ 0.86
PSMC4-202ENST00000455878 ZFYVE9O95405 1425 aa20.37■□□□□ 0.85
PSMC4-202ENST00000455878 ATF3P18847 181 aa20.36■□□□□ 0.85
PSMC4-202ENST00000455878 NUP155O75694 1391 aa20.35■□□□□ 0.85
PSMC4-202ENST00000455878 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
PSMC4-202ENST00000455878 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
PSMC4-202ENST00000455878 ROBO1Q9Y6N7 1651 aa20.35■□□□□ 0.85
PSMC4-202ENST00000455878 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
PSMC4-202ENST00000455878 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
PSMC4-202ENST00000455878 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
PSMC4-202ENST00000455878 NCOA3Q9Y6Q9 1424 aa20.33■□□□□ 0.84
PSMC4-202ENST00000455878 JCADQ9P266 1359 aa20.33■□□□□ 0.84
PSMC4-202ENST00000455878 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
PSMC4-202ENST00000455878 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
PSMC4-202ENST00000455878 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
PSMC4-202ENST00000455878 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
PSMC4-202ENST00000455878 PIK3R4Q99570 1358 aa20.3■□□□□ 0.84
PSMC4-202ENST00000455878 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
PSMC4-202ENST00000455878 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
PSMC4-202ENST00000455878 MYO5BQ9ULV0 1848 aa20.29■□□□□ 0.84
PSMC4-202ENST00000455878 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
PSMC4-202ENST00000455878 UNC13BO14795 1591 aa20.26■□□□□ 0.83
PSMC4-202ENST00000455878 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
PSMC4-202ENST00000455878 PHLPP1O60346 1717 aa20.26■□□□□ 0.83
PSMC4-202ENST00000455878 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
PSMC4-202ENST00000455878 E9PCH4 1651 aa20.24■□□□□ 0.83
PSMC4-202ENST00000455878 ZNF772Q68DY9 489 aaPredicted RBP20.23■□□□□ 0.83
PSMC4-202ENST00000455878 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
PSMC4-202ENST00000455878 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
PSMC4-202ENST00000455878 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
PSMC4-202ENST00000455878 TRPM2O94759 1503 aa20.19■□□□□ 0.82
PSMC4-202ENST00000455878 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
PSMC4-202ENST00000455878 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
PSMC4-202ENST00000455878 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
PSMC4-202ENST00000455878 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
PSMC4-202ENST00000455878 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
PSMC4-202ENST00000455878 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
PSMC4-202ENST00000455878 COL16A1Q07092 1604 aaPredicted RBP20.14■□□□□ 0.81
PSMC4-202ENST00000455878 RXRBP28702 533 aa20.13■□□□□ 0.81
PSMC4-202ENST00000455878 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
PSMC4-202ENST00000455878 METP08581 1390 aa20.11■□□□□ 0.81
PSMC4-202ENST00000455878 DCCP43146 1447 aa20.1■□□□□ 0.81
PSMC4-202ENST00000455878 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
PSMC4-202ENST00000455878 AHDC1Q5TGY3 1603 aaPredicted RBP20.09■□□□□ 0.81
PSMC4-202ENST00000455878 LRP6O75581 1613 aa20.08■□□□□ 0.8
PSMC4-202ENST00000455878 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
PSMC4-202ENST00000455878 SPHKAPQ2M3C7 1700 aa20.06■□□□□ 0.8
PSMC4-202ENST00000455878 UPF1Q92900 1129 aaKnown RBP eCLIP20.04■□□□□ 0.8
PSMC4-202ENST00000455878 MST1RQ04912 1400 aa20.04■□□□□ 0.8
PSMC4-202ENST00000455878 AFF2P51816 1311 aa20.04■□□□□ 0.8
PSMC4-202ENST00000455878 SETD5Q9C0A6 1442 aa20.03■□□□□ 0.8
PSMC4-202ENST00000455878 DDX17Q92841 729 aaKnown RBP20.03■□□□□ 0.8
PSMC4-202ENST00000455878 C8orf37Q96NL8 207 aa20.03■□□□□ 0.8
PSMC4-202ENST00000455878 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
PSMC4-202ENST00000455878 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
PSMC4-202ENST00000455878 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
PSMC4-202ENST00000455878 RRBP1Q9P2E9 1410 aaKnown RBP20.03■□□□□ 0.8
PSMC4-202ENST00000455878 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
PSMC4-202ENST00000455878 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.79
PSMC4-202ENST00000455878 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
PSMC4-202ENST00000455878 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
PSMC4-202ENST00000455878 NGLY1Q96IV0 654 aa20.01■□□□□ 0.79
PSMC4-202ENST00000455878 NAIPQ13075 1403 aa20■□□□□ 0.79
PSMC4-202ENST00000455878 XRN1Q8IZH2 1706 aaKnown RBP20■□□□□ 0.79
PSMC4-202ENST00000455878 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
PSMC4-202ENST00000455878 ADAMTS2O95450 1211 aa19.98■□□□□ 0.79
PSMC4-202ENST00000455878 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
PSMC4-202ENST00000455878 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
PSMC4-202ENST00000455878 KIF1BO60333 1816 aa19.97■□□□□ 0.79
PSMC4-202ENST00000455878 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
PSMC4-202ENST00000455878 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
PSMC4-202ENST00000455878 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
PSMC4-202ENST00000455878 C1orf167Q5SNV9 1468 aa19.95■□□□□ 0.78
PSMC4-202ENST00000455878 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
PSMC4-202ENST00000455878 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
PSMC4-202ENST00000455878 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
PSMC4-202ENST00000455878 SOS2Q07890 1332 aaPredicted RBP19.92■□□□□ 0.78
PSMC4-202ENST00000455878 NHSL1Q5SYE7 1610 aa19.92■□□□□ 0.78
PSMC4-202ENST00000455878 RGL3Q3MIN7 710 aa19.91■□□□□ 0.78
PSMC4-202ENST00000455878 PTCH1Q13635 1447 aa19.91■□□□□ 0.78
PSMC4-202ENST00000455878 FOXD1Q16676 465 aa19.9■□□□□ 0.78
PSMC4-202ENST00000455878 USP21Q9UK80 565 aa19.9■□□□□ 0.78
PSMC4-202ENST00000455878 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
PSMC4-202ENST00000455878 STK26Q9P289 416 aa19.89■□□□□ 0.77
PSMC4-202ENST00000455878 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
PSMC4-202ENST00000455878 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
PSMC4-202ENST00000455878 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms