RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
PDXDC1-204ENST00000455313 LAMC1P11047 1609 aa23.62■■□□□ 1.37
PDXDC1-204ENST00000455313 RIMS1Q86UR5 1692 aaKnown RBP23.62■■□□□ 1.37
PDXDC1-204ENST00000455313 ADGRF5Q8IZF2 1346 aa23.62■■□□□ 1.37
PDXDC1-204ENST00000455313 USP47Q96K76 1375 aa23.62■■□□□ 1.37
PDXDC1-204ENST00000455313 CEBPAP49715 358 aaPredicted RBP23.61■■□□□ 1.37
PDXDC1-204ENST00000455313 KIAA1210Q9ULL0 1709 aa23.61■■□□□ 1.37
PDXDC1-204ENST00000455313 NBPF1Q3BBV0 1214 aa23.61■■□□□ 1.37
PDXDC1-204ENST00000455313 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
PDXDC1-204ENST00000455313 PIK3C2GO75747 1445 aa23.58■■□□□ 1.36
PDXDC1-204ENST00000455313 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
PDXDC1-204ENST00000455313 DIEXFQ68CQ4 756 aaKnown RBP23.57■■□□□ 1.36
PDXDC1-204ENST00000455313 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
PDXDC1-204ENST00000455313 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
PDXDC1-204ENST00000455313 UBR1Q8IWV7 1749 aa23.54■■□□□ 1.36
PDXDC1-204ENST00000455313 ZFYVE9O95405 1425 aa23.54■■□□□ 1.36
PDXDC1-204ENST00000455313 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
PDXDC1-204ENST00000455313 NUTM2DQ5VT03 806 aaPredicted RBP23.52■■□□□ 1.36
PDXDC1-204ENST00000455313 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
PDXDC1-204ENST00000455313 IQGAP1P46940 1657 aa23.52■■□□□ 1.36
PDXDC1-204ENST00000455313 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
PDXDC1-204ENST00000455313 MYO3AQ8NEV4 1616 aa23.5■■□□□ 1.35
PDXDC1-204ENST00000455313 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
PDXDC1-204ENST00000455313 RIMS2Q9UQ26 1411 aa23.48■■□□□ 1.35
PDXDC1-204ENST00000455313 SETBP1Q9Y6X0 1596 aa23.48■■□□□ 1.35
PDXDC1-204ENST00000455313 SCAF11Q99590 1463 aaKnown RBP23.46■■□□□ 1.35
PDXDC1-204ENST00000455313 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.35
PDXDC1-204ENST00000455313 C14orf93Q9H972 538 aaKnown RBP23.45■■□□□ 1.35
PDXDC1-204ENST00000455313 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.34
PDXDC1-204ENST00000455313 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
PDXDC1-204ENST00000455313 C11orf95C9JLR9 678 aaPredicted RBP23.42■■□□□ 1.34
PDXDC1-204ENST00000455313 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
PDXDC1-204ENST00000455313 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
PDXDC1-204ENST00000455313 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
PDXDC1-204ENST00000455313 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
PDXDC1-204ENST00000455313 PTPRMP28827 1452 aa23.4■■□□□ 1.34
PDXDC1-204ENST00000455313 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
PDXDC1-204ENST00000455313 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
PDXDC1-204ENST00000455313 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
PDXDC1-204ENST00000455313 KIF7Q2M1P5 1343 aa23.38■■□□□ 1.33
PDXDC1-204ENST00000455313 ALKQ9UM73 1620 aa23.37■■□□□ 1.33
PDXDC1-204ENST00000455313 ZNF142P52746 1687 aaPredicted RBP23.37■■□□□ 1.33
PDXDC1-204ENST00000455313 SETD1BQ9UPS6 1966 aaKnown RBP23.37■■□□□ 1.33
PDXDC1-204ENST00000455313 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
PDXDC1-204ENST00000455313 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
PDXDC1-204ENST00000455313 SLIT1O75093 1534 aa23.36■■□□□ 1.33
PDXDC1-204ENST00000455313 ARHGAP23Q9P227 1491 aa23.35■■□□□ 1.33
PDXDC1-204ENST00000455313 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
PDXDC1-204ENST00000455313 SETD1AO15047 1707 aaKnown RBP23.35■■□□□ 1.33
PDXDC1-204ENST00000455313 TESK2Q96S53 571 aa23.35■■□□□ 1.33
PDXDC1-204ENST00000455313 HDGFP51858 240 aaKnown RBP23.34■■□□□ 1.33
PDXDC1-204ENST00000455313 THEMISQ8N1K5 641 aaPredicted RBP23.31■■□□□ 1.32
PDXDC1-204ENST00000455313 ARHGEF28Q8N1W1 1705 aaKnown RBP23.3■■□□□ 1.32
PDXDC1-204ENST00000455313 LTKP29376 864 aa23.29■■□□□ 1.32
PDXDC1-204ENST00000455313 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
PDXDC1-204ENST00000455313 DISP3Q9P2K9 1392 aa23.29■■□□□ 1.32
PDXDC1-204ENST00000455313 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
PDXDC1-204ENST00000455313 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
PDXDC1-204ENST00000455313 TXNDC2Q86VQ3 553 aa23.26■■□□□ 1.31
PDXDC1-204ENST00000455313 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
PDXDC1-204ENST00000455313 QRICH2Q9H0J4 1663 aa23.26■■□□□ 1.31
PDXDC1-204ENST00000455313 POLR3GLQ9BT43 218 aa23.25■■□□□ 1.31
PDXDC1-204ENST00000455313 TMF1P82094 1093 aa23.24■■□□□ 1.31
PDXDC1-204ENST00000455313 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
PDXDC1-204ENST00000455313 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
PDXDC1-204ENST00000455313 ADAMTS13Q76LX8 1427 aa23.24■■□□□ 1.31
PDXDC1-204ENST00000455313 MIER1Q8N108 512 aa23.23■■□□□ 1.31
PDXDC1-204ENST00000455313 STK26Q9P289 416 aa23.21■■□□□ 1.31
PDXDC1-204ENST00000455313 METP08581 1390 aa23.21■■□□□ 1.31
PDXDC1-204ENST00000455313 BCANQ96GW7 911 aa23.21■■□□□ 1.31
PDXDC1-204ENST00000455313 LRPPRCP42704 1394 aaKnown RBP23.19■■□□□ 1.3
PDXDC1-204ENST00000455313 MED14O60244 1454 aa23.19■■□□□ 1.3
PDXDC1-204ENST00000455313 KDM4FA0A1W2PPD8 638 aa23.18■■□□□ 1.3
PDXDC1-204ENST00000455313 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
PDXDC1-204ENST00000455313 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
PDXDC1-204ENST00000455313 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
PDXDC1-204ENST00000455313 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
PDXDC1-204ENST00000455313 ABCC11Q96J66 1382 aa23.15■■□□□ 1.3
PDXDC1-204ENST00000455313 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
PDXDC1-204ENST00000455313 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
PDXDC1-204ENST00000455313 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
PDXDC1-204ENST00000455313 TECPR2O15040 1411 aa23.13■■□□□ 1.29
PDXDC1-204ENST00000455313 ANKLE2Q86XL3 938 aa23.12■■□□□ 1.29
PDXDC1-204ENST00000455313 CPS1P31327 1500 aa23.12■■□□□ 1.29
PDXDC1-204ENST00000455313 MYOM1P52179 1685 aa23.11■■□□□ 1.29
PDXDC1-204ENST00000455313 TULP4Q9NRJ4 1543 aa23.11■■□□□ 1.29
PDXDC1-204ENST00000455313 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
PDXDC1-204ENST00000455313 POGKQ9P215 609 aa23.09■■□□□ 1.29
PDXDC1-204ENST00000455313 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
PDXDC1-204ENST00000455313 ANP32CO43423 234 aa23.08■■□□□ 1.29
PDXDC1-204ENST00000455313 PTPRUQ92729 1446 aa23.07■■□□□ 1.28
PDXDC1-204ENST00000455313 PLEKHH1Q9ULM0 1364 aa23.06■■□□□ 1.28
PDXDC1-204ENST00000455313 FAM135BQ49AJ0 1406 aa23.06■■□□□ 1.28
PDXDC1-204ENST00000455313 WAPLQ7Z5K2 1190 aa23.05■■□□□ 1.28
PDXDC1-204ENST00000455313 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
PDXDC1-204ENST00000455313 MINK1Q8N4C8 1332 aaPredicted RBP23.04■■□□□ 1.28
PDXDC1-204ENST00000455313 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
PDXDC1-204ENST00000455313 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
PDXDC1-204ENST00000455313 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
PDXDC1-204ENST00000455313 SIRT1Q96EB6 747 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms