RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 TMEM131LA2VDJ0 1609 aa13.75□□□□□ -0.21
ATXN3-205ENST00000454964 SLIT1O75093 1534 aa13.75□□□□□ -0.21
ATXN3-205ENST00000454964 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
ATXN3-205ENST00000454964 TXNDC2Q86VQ3 553 aa13.75□□□□□ -0.21
ATXN3-205ENST00000454964 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
ATXN3-205ENST00000454964 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
ATXN3-205ENST00000454964 PPP1R15AO75807 674 aaPredicted RBP13.73□□□□□ -0.21
ATXN3-205ENST00000454964 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
ATXN3-205ENST00000454964 CLTCL1P53675 1640 aa13.72□□□□□ -0.21
ATXN3-205ENST00000454964 POLR1AO95602 1720 aaPredicted RBP13.72□□□□□ -0.21
ATXN3-205ENST00000454964 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.21
ATXN3-205ENST00000454964 HSPA2P54652 639 aa13.71□□□□□ -0.21
ATXN3-205ENST00000454964 MED14O60244 1454 aa13.71□□□□□ -0.21
ATXN3-205ENST00000454964 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
ATXN3-205ENST00000454964 SCAF11Q99590 1463 aaKnown RBP13.7□□□□□ -0.22
ATXN3-205ENST00000454964 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
ATXN3-205ENST00000454964 RIMS2Q9UQ26 1411 aa13.69□□□□□ -0.22
ATXN3-205ENST00000454964 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
ATXN3-205ENST00000454964 RGL3Q3MIN7 710 aa13.68□□□□□ -0.22
ATXN3-205ENST00000454964 BCANQ96GW7 911 aa13.68□□□□□ -0.22
ATXN3-205ENST00000454964 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
ATXN3-205ENST00000454964 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
ATXN3-205ENST00000454964 PLEKHG1Q9ULL1 1385 aa13.67□□□□□ -0.22
ATXN3-205ENST00000454964 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
ATXN3-205ENST00000454964 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
ATXN3-205ENST00000454964 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
ATXN3-205ENST00000454964 PPLO60437 1756 aa13.65□□□□□ -0.22
ATXN3-205ENST00000454964 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
ATXN3-205ENST00000454964 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
ATXN3-205ENST00000454964 LTKP29376 864 aa13.64□□□□□ -0.23
ATXN3-205ENST00000454964 NEUROD1Q13562 356 aa13.63□□□□□ -0.23
ATXN3-205ENST00000454964 DCAF11Q8TEB1 546 aa13.63□□□□□ -0.23
ATXN3-205ENST00000454964 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
ATXN3-205ENST00000454964 TONSLQ96HA7 1378 aa13.62□□□□□ -0.23
ATXN3-205ENST00000454964 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
ATXN3-205ENST00000454964 MYOM2P54296 1465 aa13.61□□□□□ -0.23
ATXN3-205ENST00000454964 IFT172Q9UG01 1749 aa13.6□□□□□ -0.23
ATXN3-205ENST00000454964 SETBP1Q9Y6X0 1596 aa13.59□□□□□ -0.23
ATXN3-205ENST00000454964 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
ATXN3-205ENST00000454964 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
ATXN3-205ENST00000454964 LAMC1P11047 1609 aa13.58□□□□□ -0.24
ATXN3-205ENST00000454964 KCNA6P17658 529 aa13.58□□□□□ -0.24
ATXN3-205ENST00000454964 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
ATXN3-205ENST00000454964 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
ATXN3-205ENST00000454964 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
ATXN3-205ENST00000454964 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
ATXN3-205ENST00000454964 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
ATXN3-205ENST00000454964 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
ATXN3-205ENST00000454964 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
ATXN3-205ENST00000454964 SLC26A8Q96RN1 970 aa13.55□□□□□ -0.24
ATXN3-205ENST00000454964 KIAA1210Q9ULL0 1709 aa13.55□□□□□ -0.24
ATXN3-205ENST00000454964 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
ATXN3-205ENST00000454964 CPS1P31327 1500 aa13.54□□□□□ -0.24
ATXN3-205ENST00000454964 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
ATXN3-205ENST00000454964 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
ATXN3-205ENST00000454964 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
ATXN3-205ENST00000454964 NCOA3Q9Y6Q9 1424 aa13.54□□□□□ -0.24
ATXN3-205ENST00000454964 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
ATXN3-205ENST00000454964 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
ATXN3-205ENST00000454964 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
ATXN3-205ENST00000454964 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
ATXN3-205ENST00000454964 IQSEC2Q5JU85 1478 aa13.5□□□□□ -0.25
ATXN3-205ENST00000454964 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
ATXN3-205ENST00000454964 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
ATXN3-205ENST00000454964 PRAG1Q86YV5 1406 aa13.48□□□□□ -0.25
ATXN3-205ENST00000454964 ZEB1P37275 1124 aaPredicted RBP13.48□□□□□ -0.25
ATXN3-205ENST00000454964 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
ATXN3-205ENST00000454964 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
ATXN3-205ENST00000454964 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
ATXN3-205ENST00000454964 NWD1Q149M9 1564 aa13.46□□□□□ -0.25
ATXN3-205ENST00000454964 ZNF335Q9H4Z2 1342 aaPredicted RBP13.46□□□□□ -0.25
ATXN3-205ENST00000454964 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
ATXN3-205ENST00000454964 METP08581 1390 aa13.45□□□□□ -0.26
ATXN3-205ENST00000454964 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
ATXN3-205ENST00000454964 FAM135BQ49AJ0 1406 aa13.45□□□□□ -0.26
ATXN3-205ENST00000454964 YTHDC2Q9H6S0 1430 aaKnown RBP13.45□□□□□ -0.26
ATXN3-205ENST00000454964 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
ATXN3-205ENST00000454964 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
ATXN3-205ENST00000454964 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
ATXN3-205ENST00000454964 TECPR2O15040 1411 aa13.44□□□□□ -0.26
ATXN3-205ENST00000454964 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
ATXN3-205ENST00000454964 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
ATXN3-205ENST00000454964 TOM1O60784 492 aa13.43□□□□□ -0.26
ATXN3-205ENST00000454964 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
ATXN3-205ENST00000454964 C14orf37Q86TY3 774 aa13.43□□□□□ -0.26
ATXN3-205ENST00000454964 POGKQ9P215 609 aa13.43□□□□□ -0.26
ATXN3-205ENST00000454964 LTBP4Q8N2S1 1624 aa13.42□□□□□ -0.26
ATXN3-205ENST00000454964 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
ATXN3-205ENST00000454964 DLC1Q96QB1 1528 aa13.42□□□□□ -0.26
ATXN3-205ENST00000454964 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
ATXN3-205ENST00000454964 ATF3P18847 181 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 STK26Q9P289 416 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 MSH6P52701 1360 aa13.41□□□□□ -0.26
ATXN3-205ENST00000454964 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
ATXN3-205ENST00000454964 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 TRAK1Q9UPV9 953 aa13.39□□□□□ -0.27
ATXN3-205ENST00000454964 TMEM94Q12767 1356 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms