RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
USP41-202ENST00000454608 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
USP41-202ENST00000454608 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
USP41-202ENST00000454608 ABCC5O15440 1437 aa16.48■□□□□ 0.23
USP41-202ENST00000454608 BCANQ96GW7 911 aa16.48■□□□□ 0.23
USP41-202ENST00000454608 SLC52A1Q9NWF4 448 aa16.48■□□□□ 0.23
USP41-202ENST00000454608 MEX3CQ5U5Q3 659 aaKnown RBP16.47■□□□□ 0.23
USP41-202ENST00000454608 LRP6O75581 1613 aa16.47■□□□□ 0.23
USP41-202ENST00000454608 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
USP41-202ENST00000454608 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
USP41-202ENST00000454608 PTPN23Q9H3S7 1636 aa16.45■□□□□ 0.22
USP41-202ENST00000454608 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
USP41-202ENST00000454608 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
USP41-202ENST00000454608 CDK12Q9NYV4 1490 aaPredicted RBP16.44■□□□□ 0.22
USP41-202ENST00000454608 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
USP41-202ENST00000454608 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
USP41-202ENST00000454608 DAPK1P53355 1430 aa16.44■□□□□ 0.22
USP41-202ENST00000454608 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
USP41-202ENST00000454608 ZFYVE9O95405 1425 aa16.43■□□□□ 0.22
USP41-202ENST00000454608 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.42■□□□□ 0.22
USP41-202ENST00000454608 ANKRD30AQ9BXX3 1397 aa16.42■□□□□ 0.22
USP41-202ENST00000454608 RXRBP28702 533 aa16.42■□□□□ 0.22
USP41-202ENST00000454608 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
USP41-202ENST00000454608 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
USP41-202ENST00000454608 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
USP41-202ENST00000454608 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
USP41-202ENST00000454608 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
USP41-202ENST00000454608 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
USP41-202ENST00000454608 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
USP41-202ENST00000454608 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
USP41-202ENST00000454608 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
USP41-202ENST00000454608 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
USP41-202ENST00000454608 ATF3P18847 181 aa16.38■□□□□ 0.21
USP41-202ENST00000454608 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
USP41-202ENST00000454608 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
USP41-202ENST00000454608 DCCP43146 1447 aa16.33■□□□□ 0.2
USP41-202ENST00000454608 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
USP41-202ENST00000454608 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
USP41-202ENST00000454608 NUTM2BA6NNL0 878 aaPredicted RBP16.32■□□□□ 0.2
USP41-202ENST00000454608 NUTM2EB1AL46 878 aaPredicted RBP16.32■□□□□ 0.2
USP41-202ENST00000454608 TRPM2O94759 1503 aa16.32■□□□□ 0.2
USP41-202ENST00000454608 AFF2P51816 1311 aa16.32■□□□□ 0.2
USP41-202ENST00000454608 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
USP41-202ENST00000454608 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
USP41-202ENST00000454608 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
USP41-202ENST00000454608 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
USP41-202ENST00000454608 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
USP41-202ENST00000454608 RBM6P78332 1123 aaKnown RBP16.29■□□□□ 0.2
USP41-202ENST00000454608 APLP2Q06481 763 aa16.29■□□□□ 0.2
USP41-202ENST00000454608 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
USP41-202ENST00000454608 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
USP41-202ENST00000454608 RGS12O14924 1447 aa16.28■□□□□ 0.2
USP41-202ENST00000454608 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
USP41-202ENST00000454608 FOXD1Q16676 465 aa16.27■□□□□ 0.2
USP41-202ENST00000454608 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
USP41-202ENST00000454608 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
USP41-202ENST00000454608 E9PCH4 1651 aa16.26■□□□□ 0.19
USP41-202ENST00000454608 UNC13BO14795 1591 aa16.26■□□□□ 0.19
USP41-202ENST00000454608 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
USP41-202ENST00000454608 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
USP41-202ENST00000454608 MST1RQ04912 1400 aa16.24■□□□□ 0.19
USP41-202ENST00000454608 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
USP41-202ENST00000454608 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
USP41-202ENST00000454608 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
USP41-202ENST00000454608 ATAD2Q6PL18 1390 aa16.22■□□□□ 0.19
USP41-202ENST00000454608 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
USP41-202ENST00000454608 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
USP41-202ENST00000454608 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
USP41-202ENST00000454608 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
USP41-202ENST00000454608 LAMC1P11047 1609 aa16.18■□□□□ 0.18
USP41-202ENST00000454608 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
USP41-202ENST00000454608 ZRANB1Q9UGI0 708 aa16.17■□□□□ 0.18
USP41-202ENST00000454608 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
USP41-202ENST00000454608 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
USP41-202ENST00000454608 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
USP41-202ENST00000454608 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
USP41-202ENST00000454608 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
USP41-202ENST00000454608 CCDC125Q86Z20 511 aa16.14■□□□□ 0.17
USP41-202ENST00000454608 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
USP41-202ENST00000454608 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
USP41-202ENST00000454608 USP21Q9UK80 565 aa16.13■□□□□ 0.17
USP41-202ENST00000454608 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
USP41-202ENST00000454608 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
USP41-202ENST00000454608 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
USP41-202ENST00000454608 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
USP41-202ENST00000454608 COL22A1Q8NFW1 1626 aaPredicted RBP16.11■□□□□ 0.17
USP41-202ENST00000454608 METP08581 1390 aa16.11■□□□□ 0.17
USP41-202ENST00000454608 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
USP41-202ENST00000454608 ROCK1Q13464 1354 aa16.1■□□□□ 0.17
USP41-202ENST00000454608 ATRNO75882 1429 aa16.1■□□□□ 0.17
USP41-202ENST00000454608 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
USP41-202ENST00000454608 NUP155O75694 1391 aa16.09■□□□□ 0.17
USP41-202ENST00000454608 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
USP41-202ENST00000454608 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
USP41-202ENST00000454608 KIF1BO60333 1816 aa16.05■□□□□ 0.16
USP41-202ENST00000454608 EP400Q96L91 3159 aa16.04■□□□□ 0.16
USP41-202ENST00000454608 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.03■□□□□ 0.16
USP41-202ENST00000454608 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
USP41-202ENST00000454608 MYOM2P54296 1465 aa16.02■□□□□ 0.15
USP41-202ENST00000454608 BCL9LQ86UU0 1499 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms