RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 DSG2Q14126 1118 aa13.94□□□□□ -0.18
RFC3P1-201ENST00000454568 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
RFC3P1-201ENST00000454568 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
RFC3P1-201ENST00000454568 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
RFC3P1-201ENST00000454568 PHLDB1Q86UU1 1377 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 HRO43593 1189 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 PSEN2P49810 448 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
RFC3P1-201ENST00000454568 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
RFC3P1-201ENST00000454568 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 NEO1Q92859 1461 aa13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
RFC3P1-201ENST00000454568 OXER1Q8TDS5 423 aa13.84□□□□□ -0.19
RFC3P1-201ENST00000454568 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
RFC3P1-201ENST00000454568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
RFC3P1-201ENST00000454568 KCTD12Q96CX2 325 aaKnown RBP13.81□□□□□ -0.2
RFC3P1-201ENST00000454568 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
RFC3P1-201ENST00000454568 FANCAO15360 1455 aa13.8□□□□□ -0.2
RFC3P1-201ENST00000454568 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
RFC3P1-201ENST00000454568 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 ZNF454Q8N9F8 522 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
RFC3P1-201ENST00000454568 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
RFC3P1-201ENST00000454568 PDE4AP27815 886 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 CLIP1P30622 1438 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
RFC3P1-201ENST00000454568 EFCAB2Q5VUJ9 269 aa13.76□□□□□ -0.21
RFC3P1-201ENST00000454568 PLCH2O75038 1416 aa13.75□□□□□ -0.21
RFC3P1-201ENST00000454568 KIF14Q15058 1648 aa13.75□□□□□ -0.21
RFC3P1-201ENST00000454568 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 MYO5CQ9NQX4 1742 aa13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 PTPREP23469 700 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
RFC3P1-201ENST00000454568 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
RFC3P1-201ENST00000454568 FOSBP53539 338 aa13.7□□□□□ -0.22
RFC3P1-201ENST00000454568 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
RFC3P1-201ENST00000454568 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
RFC3P1-201ENST00000454568 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 MLECQ14165 292 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 PTPN5P54829 565 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 PTPRMP28827 1452 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 EVI5O60447 810 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 MADDQ8WXG6 1647 aa13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 ATP10AO60312 1499 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 RIMS1Q86UR5 1692 aaKnown RBP13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 RGS20O76081 388 aa13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
RFC3P1-201ENST00000454568 WNT2BQ93097 391 aa13.59□□□□□ -0.23
RFC3P1-201ENST00000454568 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 CCNB3Q8WWL7 1395 aa13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
RFC3P1-201ENST00000454568 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 ABCC1P33527 1531 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms