RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SAMD7Q7Z3H4 446 aa7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 LRCH3Q96II8 777 aa7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 TSR3Q9UJK0 312 aaKnown RBP7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 HPS5Q9UPZ3 1129 aa7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
HMGB1P15-201ENST00000453854 TTC13Q8NBP0 860 aa7.6□□□□□ -1.19
HMGB1P15-201ENST00000453854 IL27Q8NEV9 243 aa7.6□□□□□ -1.19
HMGB1P15-201ENST00000453854 PNMA3Q9UL41 463 aa7.6□□□□□ -1.19
HMGB1P15-201ENST00000453854 PADI6Q6TGC4 694 aa7.59□□□□□ -1.19
HMGB1P15-201ENST00000453854 NUDT18Q6ZVK8 323 aa7.59□□□□□ -1.19
HMGB1P15-201ENST00000453854 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
HMGB1P15-201ENST00000453854 NBPF26B4DH59 902 aa7.57□□□□□ -1.2
HMGB1P15-201ENST00000453854 PARP9Q8IXQ6 854 aa7.57□□□□□ -1.2
HMGB1P15-201ENST00000453854 FAM117AQ9C073 453 aa7.57□□□□□ -1.2
HMGB1P15-201ENST00000453854 RBM27Q9P2N5 1060 aaKnown RBP7.57□□□□□ -1.2
HMGB1P15-201ENST00000453854 PPP4CP60510 307 aa7.55□□□□□ -1.2
HMGB1P15-201ENST00000453854 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
HMGB1P15-201ENST00000453854 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
HMGB1P15-201ENST00000453854 KCNC4Q03721 635 aa7.53□□□□□ -1.2
HMGB1P15-201ENST00000453854 EYA1Q99502 592 aa7.53□□□□□ -1.2
HMGB1P15-201ENST00000453854 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
HMGB1P15-201ENST00000453854 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.21
HMGB1P15-201ENST00000453854 RGS20O76081 388 aa7.51□□□□□ -1.21
HMGB1P15-201ENST00000453854 APLP1P51693 650 aa7.51□□□□□ -1.21
HMGB1P15-201ENST00000453854 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
HMGB1P15-201ENST00000453854 SWT1Q5T5J6 900 aaKnown RBP7.51□□□□□ -1.21
HMGB1P15-201ENST00000453854 GOPCQ9HD26 462 aa7.51□□□□□ -1.21
HMGB1P15-201ENST00000453854 RNF40O75150 1001 aa7.5□□□□□ -1.21
HMGB1P15-201ENST00000453854 MTRQ99707 1265 aa7.49□□□□□ -1.21
HMGB1P15-201ENST00000453854 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
HMGB1P15-201ENST00000453854 MS4A1P11836 297 aa7.48□□□□□ -1.21
HMGB1P15-201ENST00000453854 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P15-201ENST00000453854 GIGYF2Q6Y7W6 1299 aaKnown RBP7.48□□□□□ -1.21
HMGB1P15-201ENST00000453854 ZNF516Q92618 1163 aa7.48□□□□□ -1.21
HMGB1P15-201ENST00000453854 PHOX2BQ99453 314 aa7.47□□□□□ -1.21
HMGB1P15-201ENST00000453854 ADGRG1Q9Y653 693 aa7.47□□□□□ -1.21
HMGB1P15-201ENST00000453854 CLCN1P35523 988 aa7.46□□□□□ -1.22
HMGB1P15-201ENST00000453854 HDGFP51858 240 aaKnown RBP7.45□□□□□ -1.22
HMGB1P15-201ENST00000453854 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
HMGB1P15-201ENST00000453854 OATP04181 439 aa7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 SLF2Q8IX21 1173 aa7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 NKX2-3Q8TAU0 364 aa7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 ARXQ96QS3 562 aa7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 IRX2Q9BZI1 471 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 IL21Q9HBE4 155 aa7.44□□□□□ -1.22
HMGB1P15-201ENST00000453854 COPS2P61201 443 aa7.43□□□□□ -1.22
HMGB1P15-201ENST00000453854 RCCD1A6NED2 376 aa7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 DNAJB2P25686 324 aa7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 MDM2Q00987 491 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 PPP1R18Q6NYC8 613 aa7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
HMGB1P15-201ENST00000453854 SSTR3P32745 418 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P15-201ENST00000453854 RBM46Q8TBY0 533 aaKnown RBP7.41□□□□□ -1.22
HMGB1P15-201ENST00000453854 ZMYND15Q9H091 742 aa7.41□□□□□ -1.22
HMGB1P15-201ENST00000453854 SH3D19Q5HYK7 790 aa7.4□□□□□ -1.22
HMGB1P15-201ENST00000453854 FAM217BQ9NTX9 383 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P15-201ENST00000453854 SLC10A3P09131 477 aa7.39□□□□□ -1.23
HMGB1P15-201ENST00000453854 BLOC1S3Q6QNY0 202 aa7.38□□□□□ -1.23
HMGB1P15-201ENST00000453854 SUPT5HO00267 1087 aaKnown RBP7.37□□□□□ -1.23
HMGB1P15-201ENST00000453854 FLIIQ13045 1269 aa7.37□□□□□ -1.23
HMGB1P15-201ENST00000453854 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P15-201ENST00000453854 ZPR1O75312 459 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 SKIV2LQ15477 1246 aaKnown RBP7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 BEGAINQ9BUH8 593 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 PRKD2Q9BZL6 878 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 RSPH6AQ9H0K4 717 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 PCDHB3Q9Y5E6 796 aa7.36□□□□□ -1.23
HMGB1P15-201ENST00000453854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.35□□□□□ -1.23
HMGB1P15-201ENST00000453854 TLL1O43897 1013 aa7.35□□□□□ -1.23
HMGB1P15-201ENST00000453854 CFHP08603 1231 aa7.35□□□□□ -1.23
HMGB1P15-201ENST00000453854 NLRP7Q8WX94 980 aa7.35□□□□□ -1.23
HMGB1P15-201ENST00000453854 SLC4A3P48751 1232 aa7.34□□□□□ -1.23
HMGB1P15-201ENST00000453854 LCE2BO14633 110 aa7.33□□□□□ -1.24
HMGB1P15-201ENST00000453854 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
HMGB1P15-201ENST00000453854 EMID1Q96A84 441 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P15-201ENST00000453854 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.32□□□□□ -1.24
HMGB1P15-201ENST00000453854 PRR14Q9BWN1 585 aa7.32□□□□□ -1.24
HMGB1P15-201ENST00000453854 MYSM1Q5VVJ2 828 aa7.31□□□□□ -1.24
HMGB1P15-201ENST00000453854 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 DIXDC1Q155Q3 683 aa7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 Q6ZNB5 142 aa7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 HOMEZQ8IX15 550 aa7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 PROCA1Q8NCQ7 364 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 V9GY48 417 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P15-201ENST00000453854 PPEF1O14829 653 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P15-201ENST00000453854 GFRA3O60609 400 aa7.29□□□□□ -1.24
HMGB1P15-201ENST00000453854 PUS10Q3MIT2 529 aaKnown RBP7.29□□□□□ -1.24
HMGB1P15-201ENST00000453854 TBC1D2Q9BYX2 928 aa7.29□□□□□ -1.24
HMGB1P15-201ENST00000453854 A6NJR5 290 aa7.28□□□□□ -1.24
HMGB1P15-201ENST00000453854 CD46P15529 392 aa7.28□□□□□ -1.24
HMGB1P15-201ENST00000453854 MCM6Q14566 821 aa7.28□□□□□ -1.24
HMGB1P15-201ENST00000453854 POLR3EQ9NVU0 708 aa7.28□□□□□ -1.24
HMGB1P15-201ENST00000453854 S1PR4O95977 384 aa7.27□□□□□ -1.25
HMGB1P15-201ENST00000453854 GGCXP38435 758 aa7.26□□□□□ -1.25
HMGB1P15-201ENST00000453854 CLK2P49760 499 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms