RNA–Protein interactions for RNA: ENST00000453208.5

GGA1-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 5

Gene GGA1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-215	ENST00000453208	KDM5A	P29375	1690 aa	Known RBP	28.51	■■■□□ 2.16
GGA1-215	ENST00000453208	ZFYVE9	O95405	1425 aa		28.51	■■■□□ 2.15
GGA1-215	ENST00000453208	SETD1A	O15047	1707 aa	Known RBP	28.5	■■■□□ 2.15
GGA1-215	ENST00000453208	NKTR	P30414	1462 aa	Known RBP	28.5	■■■□□ 2.15
GGA1-215	ENST00000453208	SLAIN2	Q9P270	581 aa		28.48	■■■□□ 2.15
GGA1-215	ENST00000453208	RRBP1	Q9P2E9	1410 aa	Known RBP	28.45	■■■□□ 2.15
GGA1-215	ENST00000453208	BCAN	Q96GW7	911 aa		28.45	■■■□□ 2.14
GGA1-215	ENST00000453208	LRP6	O75581	1613 aa		28.44	■■■□□ 2.14
GGA1-215	ENST00000453208	MSH6	P52701	1360 aa		28.44	■■■□□ 2.14
GGA1-215	ENST00000453208	PLEKHG1	Q9ULL1	1385 aa		28.42	■■■□□ 2.14
GGA1-215	ENST00000453208	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.42	■■■□□ 2.14
GGA1-215	ENST00000453208	SLC52A1	Q9NWF4	448 aa		28.42	■■■□□ 2.14
GGA1-215	ENST00000453208	RIMS2	Q9UQ26	1411 aa		28.42	■■■□□ 2.14
GGA1-215	ENST00000453208	ROCK1	Q13464	1354 aa		28.4	■■■□□ 2.14
GGA1-215	ENST00000453208	PHLPP1	O60346	1717 aa		28.4	■■■□□ 2.14
GGA1-215	ENST00000453208	COL16A1	Q07092	1604 aa	Predicted RBP	28.4	■■■□□ 2.14
GGA1-215	ENST00000453208	JCAD	Q9P266	1359 aa		28.39	■■■□□ 2.14
GGA1-215	ENST00000453208	MYO5B	Q9ULV0	1848 aa		28.39	■■■□□ 2.13
GGA1-215	ENST00000453208	ADAMTS13	Q76LX8	1427 aa		28.37	■■■□□ 2.13
GGA1-215	ENST00000453208	ANKRD50	Q9ULJ7	1429 aa		28.36	■■■□□ 2.13
GGA1-215	ENST00000453208	TMEM131L	A2VDJ0	1609 aa		28.36	■■■□□ 2.13
GGA1-215	ENST00000453208	CHD2	O14647	1828 aa	Known RBP	28.34	■■■□□ 2.13
GGA1-215	ENST00000453208	GCC2	Q8IWJ2	1684 aa		28.33	■■■□□ 2.13
GGA1-215	ENST00000453208	RPRD2	Q5VT52	1461 aa	Known RBP	28.33	■■■□□ 2.13
GGA1-215	ENST00000453208	PPP1R15A	O75807	674 aa	Predicted RBP	28.31	■■■□□ 2.12
GGA1-215	ENST00000453208	ITGAE	P38570	1179 aa		28.31	■■■□□ 2.12
GGA1-215	ENST00000453208	TBX22	Q9Y458	520 aa		28.31	■■■□□ 2.12
GGA1-215	ENST00000453208	PTPRU	Q92729	1446 aa		28.29	■■■□□ 2.12
GGA1-215	ENST00000453208	CHGA	P10645	457 aa	Known RBP	28.29	■■■□□ 2.12
GGA1-215	ENST00000453208	TRIM52	Q96A61	297 aa		28.25	■■■□□ 2.11
GGA1-215	ENST00000453208	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.24	■■■□□ 2.11
GGA1-215	ENST00000453208	C14orf37	Q86TY3	774 aa		28.23	■■■□□ 2.11
GGA1-215	ENST00000453208	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.23	■■■□□ 2.11
GGA1-215	ENST00000453208	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.22	■■■□□ 2.11
GGA1-215	ENST00000453208	UNC13B	O14795	1591 aa		28.22	■■■□□ 2.11
GGA1-215	ENST00000453208	NCOA3	Q9Y6Q9	1424 aa		28.21	■■■□□ 2.11
GGA1-215	ENST00000453208	BRINP3	Q76B58	766 aa		28.21	■■■□□ 2.11
GGA1-215	ENST00000453208	SPATA31A6	Q5VVP1	1343 aa		28.2	■■■□□ 2.11
GGA1-215	ENST00000453208		E9PCH4	1651 aa		28.2	■■■□□ 2.11
GGA1-215	ENST00000453208	C19orf44	Q9H6X5	657 aa		28.2	■■■□□ 2.1
GGA1-215	ENST00000453208	DIP2A	Q14689	1571 aa		28.2	■■■□□ 2.1
GGA1-215	ENST00000453208	MEX3C	Q5U5Q3	659 aa	Known RBP	28.18	■■■□□ 2.1
GGA1-215	ENST00000453208	AMOTL2	Q9Y2J4	779 aa		28.18	■■■□□ 2.1
GGA1-215	ENST00000453208	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.16	■■■□□ 2.1
GGA1-215	ENST00000453208	NUTM2E	B1AL46	878 aa	Predicted RBP	28.16	■■■□□ 2.1
GGA1-215	ENST00000453208	CADPS2	Q86UW7	1296 aa		28.16	■■■□□ 2.1
GGA1-215	ENST00000453208	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.16	■■■□□ 2.1
GGA1-215	ENST00000453208	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.16	■■■□□ 2.1
GGA1-215	ENST00000453208	ATF3	P18847	181 aa		28.15	■■■□□ 2.1
GGA1-215	ENST00000453208	HDGF	P51858	240 aa	Known RBP	28.14	■■■□□ 2.1
GGA1-215	ENST00000453208	DDX17	Q92841	729 aa	Known RBP	28.14	■■■□□ 2.1
GGA1-215	ENST00000453208	SHPRH	Q149N8	1683 aa		28.13	■■■□□ 2.09
GGA1-215	ENST00000453208	SRCAP	Q6ZRS2	3230 aa		28.13	■■■□□ 2.09
GGA1-215	ENST00000453208	PIK3R4	Q99570	1358 aa		28.12	■■■□□ 2.09
GGA1-215	ENST00000453208	ZNF772	Q68DY9	489 aa	Predicted RBP	28.12	■■■□□ 2.09
GGA1-215	ENST00000453208	NRXN3	Q9Y4C0	1643 aa		28.11	■■■□□ 2.09
GGA1-215	ENST00000453208	NAIP	Q13075	1403 aa		28.11	■■■□□ 2.09
GGA1-215	ENST00000453208	IQGAP3	Q86VI3	1631 aa		28.1	■■■□□ 2.09
GGA1-215	ENST00000453208	ASXL1	Q8IXJ9	1541 aa		28.09	■■■□□ 2.09
GGA1-215	ENST00000453208	HFM1	A2PYH4	1435 aa		28.09	■■■□□ 2.09
GGA1-215	ENST00000453208	MST1R	Q04912	1400 aa		28.09	■■■□□ 2.09
GGA1-215	ENST00000453208	MET	P08581	1390 aa		28.08	■■■□□ 2.09
GGA1-215	ENST00000453208	TRPM2	O94759	1503 aa		28.08	■■■□□ 2.08
GGA1-215	ENST00000453208	RXRB	P28702	533 aa		28.06	■■■□□ 2.08
GGA1-215	ENST00000453208	AFF2	P51816	1311 aa		28.06	■■■□□ 2.08
GGA1-215	ENST00000453208	NUP155	O75694	1391 aa		28.06	■■■□□ 2.08
GGA1-215	ENST00000453208	XRN1	Q8IZH2	1706 aa	Known RBP	28.05	■■■□□ 2.08
GGA1-215	ENST00000453208	SETD5	Q9C0A6	1442 aa		28.03	■■■□□ 2.08
GGA1-215	ENST00000453208	DCC	P43146	1447 aa		28.01	■■■□□ 2.07
GGA1-215	ENST00000453208	RGS12	O14924	1447 aa		28	■■■□□ 2.07
GGA1-215	ENST00000453208	SETBP1	Q9Y6X0	1596 aa		27.99	■■■□□ 2.07
GGA1-215	ENST00000453208	PNPLA6	Q8IY17	1366 aa		27.98	■■■□□ 2.07
GGA1-215	ENST00000453208	NHSL1	Q5SYE7	1610 aa		27.97	■■■□□ 2.07
GGA1-215	ENST00000453208	CDK12	Q9NYV4	1490 aa	Predicted RBP	27.96	■■■□□ 2.07
GGA1-215	ENST00000453208	C8orf37	Q96NL8	207 aa		27.96	■■■□□ 2.07
GGA1-215	ENST00000453208	ADGRL3	Q9HAR2	1447 aa		27.92	■■■□□ 2.06
GGA1-215	ENST00000453208	ZNF326	Q5BKZ1	582 aa	Known RBP	27.9	■■■□□ 2.06
GGA1-215	ENST00000453208	QTRT2	Q9H974	415 aa	Known RBP	27.9	■■■□□ 2.06
GGA1-215	ENST00000453208	NALCN	Q8IZF0	1738 aa		27.89	■■■□□ 2.06
GGA1-215	ENST00000453208	LRRC59	Q96AG4	307 aa	Known RBP	27.89	■■■□□ 2.06
GGA1-215	ENST00000453208	NEXMIF	Q5QGS0	1516 aa		27.88	■■■□□ 2.05
GGA1-215	ENST00000453208	ADAMTS2	O95450	1211 aa		27.88	■■■□□ 2.05
GGA1-215	ENST00000453208	ORAI2	Q96SN7	254 aa		27.86	■■■□□ 2.05
GGA1-215	ENST00000453208	C1orf167	Q5SNV9	1468 aa		27.86	■■■□□ 2.05
GGA1-215	ENST00000453208	CLTCL1	P53675	1640 aa		27.85	■■■□□ 2.05
GGA1-215	ENST00000453208	SPHKAP	Q2M3C7	1700 aa		27.85	■■■□□ 2.05
GGA1-215	ENST00000453208	RBM6	P78332	1123 aa	Known RBP	27.84	■■■□□ 2.05
GGA1-215	ENST00000453208	ROBO2	Q9HCK4	1378 aa		27.84	■■■□□ 2.05
GGA1-215	ENST00000453208	NGLY1	Q96IV0	654 aa		27.79	■■■□□ 2.04
GGA1-215	ENST00000453208	SOS2	Q07890	1332 aa	Predicted RBP	27.78	■■■□□ 2.04
GGA1-215	ENST00000453208	EP400	Q96L91	3159 aa		27.76	■■■□□ 2.03
GGA1-215	ENST00000453208	LAMC1	P11047	1609 aa		27.74	■■■□□ 2.03
GGA1-215	ENST00000453208	ACIN1	Q9UKV3	1341 aa	Known RBP	27.73	■■■□□ 2.03
GGA1-215	ENST00000453208	SLC4A1AP	Q9BWU0	796 aa	Known RBP	27.73	■■■□□ 2.03
GGA1-215	ENST00000453208	PTCH1	Q13635	1447 aa		27.73	■■■□□ 2.03
GGA1-215	ENST00000453208	USP21	Q9UK80	565 aa		27.72	■■■□□ 2.03
GGA1-215	ENST00000453208	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.69	■■■□□ 2.02
GGA1-215	ENST00000453208	ATRN	O75882	1429 aa		27.67	■■■□□ 2.02
GGA1-215	ENST00000453208	RAB3GAP2	Q9H2M9	1393 aa		27.67	■■■□□ 2.02
GGA1-215	ENST00000453208	XPC	Q01831	940 aa	Predicted RBP	27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms