RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 AEBP1Q8IUX7 1158 aa10.89□□□□□ -0.67
CSTF1-204ENST00000452950 COL9A1P20849 921 aa10.88□□□□□ -0.67
CSTF1-204ENST00000452950 DDX12PQ92771 950 aa10.88□□□□□ -0.67
CSTF1-204ENST00000452950 EPAS1Q99814 870 aa10.88□□□□□ -0.67
CSTF1-204ENST00000452950 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
CSTF1-204ENST00000452950 FNBP4Q8N3X1 1017 aaPredicted RBP10.86□□□□□ -0.67
CSTF1-204ENST00000452950 OSBPP22059 807 aa10.85□□□□□ -0.67
CSTF1-204ENST00000452950 C6orf132Q5T0Z8 1188 aa10.85□□□□□ -0.67
CSTF1-204ENST00000452950 MRPL50Q8N5N7 158 aaKnown RBP10.85□□□□□ -0.67
CSTF1-204ENST00000452950 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
CSTF1-204ENST00000452950 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
CSTF1-204ENST00000452950 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
CSTF1-204ENST00000452950 CCDC180Q9P1Z9 1646 aa10.83□□□□□ -0.68
CSTF1-204ENST00000452950 GOLGA8CPA6NN73 597 aa10.82□□□□□ -0.68
CSTF1-204ENST00000452950 TMCO4Q5TGY1 634 aa10.82□□□□□ -0.68
CSTF1-204ENST00000452950 PTPN5P54829 565 aa10.81□□□□□ -0.68
CSTF1-204ENST00000452950 SKIV2LQ15477 1246 aaKnown RBP10.81□□□□□ -0.68
CSTF1-204ENST00000452950 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
CSTF1-204ENST00000452950 NBPF3Q9H094 633 aa10.81□□□□□ -0.68
CSTF1-204ENST00000452950 RABGEF1Q9UJ41 708 aa10.81□□□□□ -0.68
CSTF1-204ENST00000452950 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
CSTF1-204ENST00000452950 RGS22Q8NE09 1264 aa10.79□□□□□ -0.68
CSTF1-204ENST00000452950 WNT2BQ93097 391 aa10.79□□□□□ -0.68
CSTF1-204ENST00000452950 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
CSTF1-204ENST00000452950 ATP1B4Q9UN42 357 aaPredicted RBP10.79□□□□□ -0.68
CSTF1-204ENST00000452950 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
CSTF1-204ENST00000452950 CLCN1P35523 988 aa10.77□□□□□ -0.69
CSTF1-204ENST00000452950 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-204ENST00000452950 PTGDRQ13258 359 aa10.77□□□□□ -0.69
CSTF1-204ENST00000452950 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
CSTF1-204ENST00000452950 MAP3K7O43318 606 aa10.76□□□□□ -0.69
CSTF1-204ENST00000452950 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
CSTF1-204ENST00000452950 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
CSTF1-204ENST00000452950 GZF1Q9H116 711 aaPredicted RBP10.75□□□□□ -0.69
CSTF1-204ENST00000452950 MTMR7Q9Y216 660 aa10.75□□□□□ -0.69
CSTF1-204ENST00000452950 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
CSTF1-204ENST00000452950 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
CSTF1-204ENST00000452950 GPCPD1Q9NPB8 672 aa10.74□□□□□ -0.69
CSTF1-204ENST00000452950 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
CSTF1-204ENST00000452950 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
CSTF1-204ENST00000452950 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-204ENST00000452950 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
CSTF1-204ENST00000452950 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-204ENST00000452950 SSTR3P32745 418 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-204ENST00000452950 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-204ENST00000452950 IRF5Q13568 498 aa10.71□□□□□ -0.69
CSTF1-204ENST00000452950 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
CSTF1-204ENST00000452950 PPP1R15AO75807 674 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-204ENST00000452950 SEPT9Q9UHD8 586 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-204ENST00000452950 PDE4CQ08493 712 aa10.69□□□□□ -0.7
CSTF1-204ENST00000452950 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
CSTF1-204ENST00000452950 ZFRQ96KR1 1074 aaKnown RBP10.69□□□□□ -0.7
CSTF1-204ENST00000452950 BEGAINQ9BUH8 593 aa10.69□□□□□ -0.7
CSTF1-204ENST00000452950 POLR3EQ9NVU0 708 aa10.69□□□□□ -0.7
CSTF1-204ENST00000452950 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
CSTF1-204ENST00000452950 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
CSTF1-204ENST00000452950 PACS2Q86VP3 889 aa10.67□□□□□ -0.7
CSTF1-204ENST00000452950 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSTF1-204ENST00000452950 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
CSTF1-204ENST00000452950 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
CSTF1-204ENST00000452950 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
CSTF1-204ENST00000452950 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
CSTF1-204ENST00000452950 BCAMP50895 628 aa10.66□□□□□ -0.7
CSTF1-204ENST00000452950 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
CSTF1-204ENST00000452950 PRSS12P56730 875 aa10.65□□□□□ -0.7
CSTF1-204ENST00000452950 FAM98CQ17RN3 349 aaKnown RBP10.65□□□□□ -0.7
CSTF1-204ENST00000452950 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
CSTF1-204ENST00000452950 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
CSTF1-204ENST00000452950 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
CSTF1-204ENST00000452950 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
CSTF1-204ENST00000452950 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
CSTF1-204ENST00000452950 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
CSTF1-204ENST00000452950 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
CSTF1-204ENST00000452950 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
CSTF1-204ENST00000452950 RFC5P40937 340 aa10.62□□□□□ -0.71
CSTF1-204ENST00000452950 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
CSTF1-204ENST00000452950 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
CSTF1-204ENST00000452950 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
CSTF1-204ENST00000452950 CALR3Q96L12 384 aaKnown RBP10.61□□□□□ -0.71
CSTF1-204ENST00000452950 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
CSTF1-204ENST00000452950 SMAPO00193 183 aa10.6□□□□□ -0.71
CSTF1-204ENST00000452950 TMEM259Q4ZIN3 620 aa10.59□□□□□ -0.71
CSTF1-204ENST00000452950 WBP1LQ9NX94 342 aa10.59□□□□□ -0.71
CSTF1-204ENST00000452950 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
CSTF1-204ENST00000452950 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
CSTF1-204ENST00000452950 C3orf80F5H4A9 247 aa10.58□□□□□ -0.72
CSTF1-204ENST00000452950 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
CSTF1-204ENST00000452950 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-204ENST00000452950 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
CSTF1-204ENST00000452950 TATDN2Q93075 761 aa10.57□□□□□ -0.72
CSTF1-204ENST00000452950 LRCH3Q96II8 777 aa10.57□□□□□ -0.72
CSTF1-204ENST00000452950 GDPD2Q9HCC8 539 aa10.57□□□□□ -0.72
CSTF1-204ENST00000452950 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-204ENST00000452950 KCNA1Q09470 495 aa10.56□□□□□ -0.72
CSTF1-204ENST00000452950 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
CSTF1-204ENST00000452950 E9PSI1 815 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 IGSF3O75054 1194 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 NYAP1Q6ZVC0 841 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 GLMNQ92990 594 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 PRM3Q9NNZ6 103 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms