RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 PLCH2O75038 1416 aa10.12□□□□□ -0.79
KARSP1-201ENST00000451871 SRCAPQ6ZRS2 3230 aa10.12□□□□□ -0.79
KARSP1-201ENST00000451871 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
KARSP1-201ENST00000451871 TOM1O60784 492 aa10.11□□□□□ -0.79
KARSP1-201ENST00000451871 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
KARSP1-201ENST00000451871 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
KARSP1-201ENST00000451871 PDE4AP27815 886 aa10.11□□□□□ -0.79
KARSP1-201ENST00000451871 MFSD10Q14728 455 aa10.11□□□□□ -0.79
KARSP1-201ENST00000451871 EFCAB2Q5VUJ9 269 aa10.1□□□□□ -0.79
KARSP1-201ENST00000451871 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
KARSP1-201ENST00000451871 AFAP1Q8N556 730 aa10.09□□□□□ -0.79
KARSP1-201ENST00000451871 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
KARSP1-201ENST00000451871 ATN1P54259 1190 aaPredicted RBP10.09□□□□□ -0.79
KARSP1-201ENST00000451871 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
KARSP1-201ENST00000451871 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
KARSP1-201ENST00000451871 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
KARSP1-201ENST00000451871 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
KARSP1-201ENST00000451871 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
KARSP1-201ENST00000451871 REREQ9P2R6 1566 aa10.07□□□□□ -0.8
KARSP1-201ENST00000451871 KDM5CP41229 1560 aa10.06□□□□□ -0.8
KARSP1-201ENST00000451871 DIP2CQ9Y2E4 1556 aa10.06□□□□□ -0.8
KARSP1-201ENST00000451871 SEMA3EO15041 775 aa10.06□□□□□ -0.8
KARSP1-201ENST00000451871 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
KARSP1-201ENST00000451871 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
KARSP1-201ENST00000451871 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
KARSP1-201ENST00000451871 AGLP35573 1532 aa10.05□□□□□ -0.8
KARSP1-201ENST00000451871 CPS1P31327 1500 aa10.05□□□□□ -0.8
KARSP1-201ENST00000451871 NPATQ14207 1427 aa10.05□□□□□ -0.8
KARSP1-201ENST00000451871 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
KARSP1-201ENST00000451871 ATMINO43313 823 aaPredicted RBP10.04□□□□□ -0.8
KARSP1-201ENST00000451871 CLCN6P51797 869 aa10.04□□□□□ -0.8
KARSP1-201ENST00000451871 ASTLQ6HA08 431 aaPredicted RBP10.03□□□□□ -0.8
KARSP1-201ENST00000451871 UPF1Q92900 1129 aaKnown RBP eCLIP10.03□□□□□ -0.8
KARSP1-201ENST00000451871 PTPRKQ15262 1439 aa10.03□□□□□ -0.8
KARSP1-201ENST00000451871 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
KARSP1-201ENST00000451871 CDK13Q14004 1512 aaKnown RBP10.03□□□□□ -0.8
KARSP1-201ENST00000451871 ZNF142P52746 1687 aaPredicted RBP10.03□□□□□ -0.8
KARSP1-201ENST00000451871 PLA2R1Q13018 1463 aa10.03□□□□□ -0.8
KARSP1-201ENST00000451871 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
KARSP1-201ENST00000451871 ZMYM3Q14202 1370 aa10.02□□□□□ -0.8
KARSP1-201ENST00000451871 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.81
KARSP1-201ENST00000451871 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.81
KARSP1-201ENST00000451871 IRX5P78411 483 aaPredicted RBP10.02□□□□□ -0.81
KARSP1-201ENST00000451871 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
KARSP1-201ENST00000451871 MICALL2Q8IY33 904 aa10.01□□□□□ -0.81
KARSP1-201ENST00000451871 GPHNQ9NQX3 736 aaPredicted RBP10.01□□□□□ -0.81
KARSP1-201ENST00000451871 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
KARSP1-201ENST00000451871 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
KARSP1-201ENST00000451871 NEUROD2Q15784 382 aa10.01□□□□□ -0.81
KARSP1-201ENST00000451871 SLC24A3Q9HC58 644 aa10□□□□□ -0.81
KARSP1-201ENST00000451871 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
KARSP1-201ENST00000451871 ARHGAP5Q13017 1502 aa9.99□□□□□ -0.81
KARSP1-201ENST00000451871 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
KARSP1-201ENST00000451871 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
KARSP1-201ENST00000451871 MYO3AQ8NEV4 1616 aa9.98□□□□□ -0.81
KARSP1-201ENST00000451871 CEP170BQ9Y4F5 1589 aaPredicted RBP9.98□□□□□ -0.81
KARSP1-201ENST00000451871 KIDINS220Q9ULH0 1771 aa9.97□□□□□ -0.81
KARSP1-201ENST00000451871 GABBR2O75899 941 aa9.97□□□□□ -0.81
KARSP1-201ENST00000451871 OCEL1Q9H607 264 aa9.97□□□□□ -0.81
KARSP1-201ENST00000451871 SHANK2Q9UPX8 1470 aa9.97□□□□□ -0.81
KARSP1-201ENST00000451871 KIF14Q15058 1648 aa9.96□□□□□ -0.81
KARSP1-201ENST00000451871 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
KARSP1-201ENST00000451871 DSG2Q14126 1118 aa9.96□□□□□ -0.81
KARSP1-201ENST00000451871 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.81
KARSP1-201ENST00000451871 CDC42BPBQ9Y5S2 1711 aa9.96□□□□□ -0.81
KARSP1-201ENST00000451871 IER5LQ5T953 404 aa9.96□□□□□ -0.82
KARSP1-201ENST00000451871 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
KARSP1-201ENST00000451871 ATP1B4Q9UN42 357 aaPredicted RBP9.96□□□□□ -0.82
KARSP1-201ENST00000451871 CLTCQ00610 1675 aaKnown RBP9.95□□□□□ -0.82
KARSP1-201ENST00000451871 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
KARSP1-201ENST00000451871 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
KARSP1-201ENST00000451871 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
KARSP1-201ENST00000451871 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
KARSP1-201ENST00000451871 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
KARSP1-201ENST00000451871 ITSN2Q9NZM3 1697 aa9.92□□□□□ -0.82
KARSP1-201ENST00000451871 TROQ12816 1431 aaPredicted RBP9.92□□□□□ -0.82
KARSP1-201ENST00000451871 ABCC1P33527 1531 aa9.92□□□□□ -0.82
KARSP1-201ENST00000451871 NEURL4Q96JN8 1562 aa9.91□□□□□ -0.82
KARSP1-201ENST00000451871 FOXK1P85037 733 aa9.91□□□□□ -0.82
KARSP1-201ENST00000451871 A2ML1A8K2U0 1454 aa9.91□□□□□ -0.82
KARSP1-201ENST00000451871 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
KARSP1-201ENST00000451871 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
KARSP1-201ENST00000451871 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
KARSP1-201ENST00000451871 DPYSL4O14531 572 aa9.9□□□□□ -0.82
KARSP1-201ENST00000451871 KIF3CO14782 793 aa9.9□□□□□ -0.82
KARSP1-201ENST00000451871 GGT6Q6P531 493 aa9.9□□□□□ -0.82
KARSP1-201ENST00000451871 COLQQ9Y215 455 aaPredicted RBP9.9□□□□□ -0.82
KARSP1-201ENST00000451871 CLIP1P30622 1438 aa9.9□□□□□ -0.83
KARSP1-201ENST00000451871 VWDEQ8N2E2 1590 aa9.9□□□□□ -0.83
KARSP1-201ENST00000451871 STRCP1A6NGW2 1772 aa9.89□□□□□ -0.83
KARSP1-201ENST00000451871 PLCG2P16885 1265 aa9.89□□□□□ -0.83
KARSP1-201ENST00000451871 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
KARSP1-201ENST00000451871 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
KARSP1-201ENST00000451871 PREX2Q70Z35 1606 aa9.89□□□□□ -0.83
KARSP1-201ENST00000451871 SYNMO15061 1565 aa9.89□□□□□ -0.83
KARSP1-201ENST00000451871 SAMD9LQ8IVG5 1584 aa9.88□□□□□ -0.83
KARSP1-201ENST00000451871 SPAG9O60271 1321 aaKnown RBP9.87□□□□□ -0.83
KARSP1-201ENST00000451871 TMEM92Q6UXU6 159 aa9.87□□□□□ -0.83
KARSP1-201ENST00000451871 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
KARSP1-201ENST00000451871 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms