RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 KCNA6P17658 529 aa25.1■■□□□ 1.61
RPUSD3-209ENST00000451405 ADGRB3O60242 1522 aa25.09■■□□□ 1.61
RPUSD3-209ENST00000451405 RBM33Q96EV2 1170 aaKnown RBP25.09■■□□□ 1.61
RPUSD3-209ENST00000451405 GCC2Q8IWJ2 1684 aa25.08■■□□□ 1.61
RPUSD3-209ENST00000451405 BCANQ96GW7 911 aa25.08■■□□□ 1.61
RPUSD3-209ENST00000451405 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.61
RPUSD3-209ENST00000451405 E9PCH4 1651 aa25.07■■□□□ 1.6
RPUSD3-209ENST00000451405 NUP155O75694 1391 aa25.06■■□□□ 1.6
RPUSD3-209ENST00000451405 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
RPUSD3-209ENST00000451405 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
RPUSD3-209ENST00000451405 RRBP1Q9P2E9 1410 aaKnown RBP25.03■■□□□ 1.6
RPUSD3-209ENST00000451405 TMEM131LA2VDJ0 1609 aa25.01■■□□□ 1.59
RPUSD3-209ENST00000451405 CHGAP10645 457 aaKnown RBP25.01■■□□□ 1.59
RPUSD3-209ENST00000451405 ZFYVE9O95405 1425 aa25.01■■□□□ 1.59
RPUSD3-209ENST00000451405 XIRP1Q702N8 1843 aaKnown RBP25■■□□□ 1.59
RPUSD3-209ENST00000451405 SLAIN2Q9P270 581 aa25■■□□□ 1.59
RPUSD3-209ENST00000451405 RIMS2Q9UQ26 1411 aa24.99■■□□□ 1.59
RPUSD3-209ENST00000451405 MSH6P52701 1360 aa24.98■■□□□ 1.59
RPUSD3-209ENST00000451405 ROBO1Q9Y6N7 1651 aa24.97■■□□□ 1.59
RPUSD3-209ENST00000451405 JCADQ9P266 1359 aa24.96■■□□□ 1.59
RPUSD3-209ENST00000451405 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
RPUSD3-209ENST00000451405 MEX3CQ5U5Q3 659 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-209ENST00000451405 PLEKHG1Q9ULL1 1385 aa24.94■■□□□ 1.58
RPUSD3-209ENST00000451405 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
RPUSD3-209ENST00000451405 PPP1R15AO75807 674 aaPredicted RBP24.93■■□□□ 1.58
RPUSD3-209ENST00000451405 NAIPQ13075 1403 aa24.92■■□□□ 1.58
RPUSD3-209ENST00000451405 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
RPUSD3-209ENST00000451405 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.9■■□□□ 1.58
RPUSD3-209ENST00000451405 ZNF772Q68DY9 489 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-209ENST00000451405 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
RPUSD3-209ENST00000451405 TBX22Q9Y458 520 aa24.88■■□□□ 1.57
RPUSD3-209ENST00000451405 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
RPUSD3-209ENST00000451405 NWD1Q149M9 1564 aa24.87■■□□□ 1.57
RPUSD3-209ENST00000451405 UPF1Q92900 1129 aaKnown RBP eCLIP24.86■■□□□ 1.57
RPUSD3-209ENST00000451405 CHD2O14647 1828 aaKnown RBP24.86■■□□□ 1.57
RPUSD3-209ENST00000451405 ADAMTS13Q76LX8 1427 aa24.85■■□□□ 1.57
RPUSD3-209ENST00000451405 SPATA31A6Q5VVP1 1343 aa24.84■■□□□ 1.57
RPUSD3-209ENST00000451405 PHLPP1O60346 1717 aa24.83■■□□□ 1.57
RPUSD3-209ENST00000451405 SPHKAPQ2M3C7 1700 aa24.83■■□□□ 1.57
RPUSD3-209ENST00000451405 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
RPUSD3-209ENST00000451405 HFM1A2PYH4 1435 aa24.79■■□□□ 1.56
RPUSD3-209ENST00000451405 ATF3P18847 181 aa24.79■■□□□ 1.56
RPUSD3-209ENST00000451405 RXRBP28702 533 aa24.79■■□□□ 1.56
RPUSD3-209ENST00000451405 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
RPUSD3-209ENST00000451405 CADPS2Q86UW7 1296 aa24.77■■□□□ 1.56
RPUSD3-209ENST00000451405 CLTCL1P53675 1640 aa24.75■■□□□ 1.55
RPUSD3-209ENST00000451405 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-209ENST00000451405 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-209ENST00000451405 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-209ENST00000451405 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
RPUSD3-209ENST00000451405 DIP2AQ14689 1571 aa24.73■■□□□ 1.55
RPUSD3-209ENST00000451405 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
RPUSD3-209ENST00000451405 NCOA3Q9Y6Q9 1424 aa24.73■■□□□ 1.55
RPUSD3-209ENST00000451405 AMOTL2Q9Y2J4 779 aa24.73■■□□□ 1.55
RPUSD3-209ENST00000451405 TRPM2O94759 1503 aa24.72■■□□□ 1.55
RPUSD3-209ENST00000451405 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
RPUSD3-209ENST00000451405 LRP6O75581 1613 aa24.72■■□□□ 1.55
RPUSD3-209ENST00000451405 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-209ENST00000451405 NRXN3Q9Y4C0 1643 aa24.7■■□□□ 1.54
RPUSD3-209ENST00000451405 COL16A1Q07092 1604 aaPredicted RBP24.69■■□□□ 1.54
RPUSD3-209ENST00000451405 FOXD1Q16676 465 aa24.67■■□□□ 1.54
RPUSD3-209ENST00000451405 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
RPUSD3-209ENST00000451405 METP08581 1390 aa24.67■■□□□ 1.54
RPUSD3-209ENST00000451405 NEXMIFQ5QGS0 1516 aa24.66■■□□□ 1.54
RPUSD3-209ENST00000451405 KIF1BO60333 1816 aa24.66■■□□□ 1.54
RPUSD3-209ENST00000451405 AFF2P51816 1311 aa24.63■■□□□ 1.53
RPUSD3-209ENST00000451405 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
RPUSD3-209ENST00000451405 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
RPUSD3-209ENST00000451405 AHDC1Q5TGY3 1603 aaPredicted RBP24.6■■□□□ 1.53
RPUSD3-209ENST00000451405 XRN1Q8IZH2 1706 aaKnown RBP24.59■■□□□ 1.53
RPUSD3-209ENST00000451405 QTRT2Q9H974 415 aaKnown RBP24.58■■□□□ 1.53
RPUSD3-209ENST00000451405 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.52
RPUSD3-209ENST00000451405 VGFO15240 615 aaPredicted RBP24.57■■□□□ 1.52
RPUSD3-209ENST00000451405 LRRC59Q96AG4 307 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-209ENST00000451405 C8orf37Q96NL8 207 aa24.57■■□□□ 1.52
RPUSD3-209ENST00000451405 MPHOSPH9Q99550 1183 aa24.57■■□□□ 1.52
RPUSD3-209ENST00000451405 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
RPUSD3-209ENST00000451405 RBM6P78332 1123 aaKnown RBP24.55■■□□□ 1.52
RPUSD3-209ENST00000451405 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
RPUSD3-209ENST00000451405 RGL3Q3MIN7 710 aa24.49■■□□□ 1.51
RPUSD3-209ENST00000451405 NGLY1Q96IV0 654 aa24.49■■□□□ 1.51
RPUSD3-209ENST00000451405 PPLO60437 1756 aa24.49■■□□□ 1.51
RPUSD3-209ENST00000451405 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
RPUSD3-209ENST00000451405 DCCP43146 1447 aa24.47■■□□□ 1.51
RPUSD3-209ENST00000451405 CCDC144AA2RUR9 1427 aa24.46■■□□□ 1.51
RPUSD3-209ENST00000451405 ADGRF5Q8IZF2 1346 aa24.46■■□□□ 1.51
RPUSD3-209ENST00000451405 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
RPUSD3-209ENST00000451405 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.51
RPUSD3-209ENST00000451405 MST1RQ04912 1400 aa24.45■■□□□ 1.51
RPUSD3-209ENST00000451405 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
RPUSD3-209ENST00000451405 RGS12O14924 1447 aa24.44■■□□□ 1.5
RPUSD3-209ENST00000451405 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
RPUSD3-209ENST00000451405 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
RPUSD3-209ENST00000451405 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
RPUSD3-209ENST00000451405 NALCNQ8IZF0 1738 aa24.42■■□□□ 1.5
RPUSD3-209ENST00000451405 SRCAPQ6ZRS2 3230 aa24.42■■□□□ 1.5
RPUSD3-209ENST00000451405 PNPLA6Q8IY17 1366 aa24.41■■□□□ 1.5
RPUSD3-209ENST00000451405 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
RPUSD3-209ENST00000451405 ATAD2Q6PL18 1390 aa24.4■■□□□ 1.5
RPUSD3-209ENST00000451405 PTCH1Q13635 1447 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms