RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.15
SCUBE2-202ENST00000450649 RRAGDQ9NQL2 400 aaPredicted RBP22.22■■□□□ 1.15
SCUBE2-202ENST00000450649 PLEKHH1Q9ULM0 1364 aa22.21■■□□□ 1.15
SCUBE2-202ENST00000450649 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
SCUBE2-202ENST00000450649 USP19O94966 1318 aa22.19■■□□□ 1.14
SCUBE2-202ENST00000450649 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
SCUBE2-202ENST00000450649 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
SCUBE2-202ENST00000450649 MAGI2Q86UL8 1455 aa22.18■■□□□ 1.14
SCUBE2-202ENST00000450649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.17■■□□□ 1.14
SCUBE2-202ENST00000450649 DUOX2Q9NRD8 1548 aa22.17■■□□□ 1.14
SCUBE2-202ENST00000450649 GOLGA2Q08379 1002 aa22.17■■□□□ 1.14
SCUBE2-202ENST00000450649 RNF17Q9BXT8 1623 aaKnown RBP22.15■■□□□ 1.14
SCUBE2-202ENST00000450649 L1TD1Q5T7N2 865 aaKnown RBP22.15■■□□□ 1.14
SCUBE2-202ENST00000450649 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
SCUBE2-202ENST00000450649 SLKQ9H2G2 1235 aaPredicted RBP22.13■■□□□ 1.13
SCUBE2-202ENST00000450649 WDR43Q15061 677 aaKnown RBP eCLIP22.13■■□□□ 1.13
SCUBE2-202ENST00000450649 BECN1Q14457 450 aa22.12■■□□□ 1.13
SCUBE2-202ENST00000450649 SEC24BO95487 1268 aa22.11■■□□□ 1.13
SCUBE2-202ENST00000450649 EIF3AQ14152 1382 aaKnown RBP22.11■■□□□ 1.13
SCUBE2-202ENST00000450649 WDR7Q9Y4E6 1490 aa22.1■■□□□ 1.13
SCUBE2-202ENST00000450649 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
SCUBE2-202ENST00000450649 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
SCUBE2-202ENST00000450649 IGHDP01880 384 aa22.1■■□□□ 1.13
SCUBE2-202ENST00000450649 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
SCUBE2-202ENST00000450649 KNSTRNQ9Y448 316 aa22.07■■□□□ 1.12
SCUBE2-202ENST00000450649 BCAR3O75815 825 aa22.06■■□□□ 1.12
SCUBE2-202ENST00000450649 ANTXR1Q9H6X2 564 aa22.06■■□□□ 1.12
SCUBE2-202ENST00000450649 TRMT2AQ8IZ69 625 aaKnown RBP22.04■■□□□ 1.12
SCUBE2-202ENST00000450649 AMER1Q5JTC6 1135 aaPredicted RBP22.04■■□□□ 1.12
SCUBE2-202ENST00000450649 ARXQ96QS3 562 aa22.04■■□□□ 1.12
SCUBE2-202ENST00000450649 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
SCUBE2-202ENST00000450649 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
SCUBE2-202ENST00000450649 CDCA8Q53HL2 280 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 PKNOX2Q96KN3 472 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 IQGAP1P46940 1657 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 STAC3Q96MF2 364 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 SPINK5Q9NQ38 1064 aaPredicted RBP22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 GLIPR1L2Q4G1C9 344 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
SCUBE2-202ENST00000450649 XRCC6P12956 609 aaKnown RBP eCLIP22.02■■□□□ 1.12
SCUBE2-202ENST00000450649 PLCH2O75038 1416 aa22.02■■□□□ 1.12
SCUBE2-202ENST00000450649 NLRP1Q9C000 1473 aa22.02■■□□□ 1.11
SCUBE2-202ENST00000450649 SYNMO15061 1565 aa22.01■■□□□ 1.11
SCUBE2-202ENST00000450649 NAP1L5Q96NT1 182 aaPredicted RBP22.01■■□□□ 1.11
SCUBE2-202ENST00000450649 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
SCUBE2-202ENST00000450649 NKTRP30414 1462 aaKnown RBP22■■□□□ 1.11
SCUBE2-202ENST00000450649 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
SCUBE2-202ENST00000450649 GOLGA6L3A6NEY3 463 aa22■■□□□ 1.11
SCUBE2-202ENST00000450649 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
SCUBE2-202ENST00000450649 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
SCUBE2-202ENST00000450649 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
SCUBE2-202ENST00000450649 EFCAB2Q5VUJ9 269 aa21.99■■□□□ 1.11
SCUBE2-202ENST00000450649 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
SCUBE2-202ENST00000450649 NPC1L1Q9UHC9 1359 aa21.98■■□□□ 1.11
SCUBE2-202ENST00000450649 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
SCUBE2-202ENST00000450649 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
SCUBE2-202ENST00000450649 TRPM2O94759 1503 aa21.97■■□□□ 1.11
SCUBE2-202ENST00000450649 FSD2A1L4K1 749 aa21.97■■□□□ 1.11
SCUBE2-202ENST00000450649 CLCN1P35523 988 aa21.96■■□□□ 1.11
SCUBE2-202ENST00000450649 ABCC1P33527 1531 aa21.96■■□□□ 1.11
SCUBE2-202ENST00000450649 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
SCUBE2-202ENST00000450649 PANK2Q9BZ23 570 aa21.96■■□□□ 1.11
SCUBE2-202ENST00000450649 TBC1D2Q9BYX2 928 aa21.96■■□□□ 1.11
SCUBE2-202ENST00000450649 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
SCUBE2-202ENST00000450649 PTPRTO14522 1441 aa21.95■■□□□ 1.1
SCUBE2-202ENST00000450649 APAF1O14727 1248 aa21.95■■□□□ 1.1
SCUBE2-202ENST00000450649 CHD1O14646 1710 aa21.95■■□□□ 1.1
SCUBE2-202ENST00000450649 TRAPPC8Q9Y2L5 1435 aa21.94■■□□□ 1.1
SCUBE2-202ENST00000450649 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
SCUBE2-202ENST00000450649 UPF2Q9HAU5 1272 aaKnown RBP21.94■■□□□ 1.1
SCUBE2-202ENST00000450649 TBC1D32Q96NH3 1257 aa21.93■■□□□ 1.1
SCUBE2-202ENST00000450649 GZF1Q9H116 711 aaPredicted RBP21.93■■□□□ 1.1
SCUBE2-202ENST00000450649 E9PSI1 815 aa21.93■■□□□ 1.1
SCUBE2-202ENST00000450649 COG6Q9Y2V7 657 aa21.93■■□□□ 1.1
SCUBE2-202ENST00000450649 CEP152O94986 1710 aa21.92■■□□□ 1.1
SCUBE2-202ENST00000450649 MCM4P33991 863 aa21.92■■□□□ 1.1
SCUBE2-202ENST00000450649 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
SCUBE2-202ENST00000450649 PANK1Q8TE04 598 aa21.92■■□□□ 1.1
SCUBE2-202ENST00000450649 RTEL1-TNFRSF6BF6WH68 1400 aa21.91■■□□□ 1.1
SCUBE2-202ENST00000450649 HSP90AA2PQ14568 343 aaPredicted RBP21.91■■□□□ 1.1
SCUBE2-202ENST00000450649 HSP90AA1P07900 732 aaKnown RBP21.9■■□□□ 1.1
SCUBE2-202ENST00000450649 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
SCUBE2-202ENST00000450649 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
SCUBE2-202ENST00000450649 SPRYD3Q8NCJ5 442 aa21.9■■□□□ 1.1
SCUBE2-202ENST00000450649 MYOM1P52179 1685 aa21.89■■□□□ 1.1
SCUBE2-202ENST00000450649 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.09
SCUBE2-202ENST00000450649 SPAG9O60271 1321 aaKnown RBP21.89■■□□□ 1.09
SCUBE2-202ENST00000450649 CLTCL1P53675 1640 aa21.88■■□□□ 1.09
SCUBE2-202ENST00000450649 ZMYND15Q9H091 742 aa21.88■■□□□ 1.09
SCUBE2-202ENST00000450649 RRP9O43818 475 aaKnown RBP21.87■■□□□ 1.09
SCUBE2-202ENST00000450649 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
SCUBE2-202ENST00000450649 CENPJQ9HC77 1338 aaPredicted RBP21.87■■□□□ 1.09
SCUBE2-202ENST00000450649 NINLQ9Y2I6 1382 aa21.86■■□□□ 1.09
SCUBE2-202ENST00000450649 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
SCUBE2-202ENST00000450649 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
SCUBE2-202ENST00000450649 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
SCUBE2-202ENST00000450649 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 TRAK2O60296 914 aa21.84■■□□□ 1.09
SCUBE2-202ENST00000450649 UHRF1BP1LA0JNW5 1464 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms