RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 PPP1R15AO75807 674 aaPredicted RBP25.34■■□□□ 1.65
RAB11FIP3-204ENST00000449879 TMEM94Q12767 1356 aa25.33■■□□□ 1.65
RAB11FIP3-204ENST00000449879 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.65
RAB11FIP3-204ENST00000449879 UNC13BO14795 1591 aa25.33■■□□□ 1.65
RAB11FIP3-204ENST00000449879 NUP155O75694 1391 aa25.32■■□□□ 1.64
RAB11FIP3-204ENST00000449879 GCC2Q8IWJ2 1684 aa25.32■■□□□ 1.64
RAB11FIP3-204ENST00000449879 MED1Q15648 1581 aaPredicted RBP25.31■■□□□ 1.64
RAB11FIP3-204ENST00000449879 MYO5BQ9ULV0 1848 aa25.3■■□□□ 1.64
RAB11FIP3-204ENST00000449879 RIMS2Q9UQ26 1411 aa25.3■■□□□ 1.64
RAB11FIP3-204ENST00000449879 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
RAB11FIP3-204ENST00000449879 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
RAB11FIP3-204ENST00000449879 TMEM131LA2VDJ0 1609 aa25.27■■□□□ 1.64
RAB11FIP3-204ENST00000449879 E9PCH4 1651 aa25.27■■□□□ 1.64
RAB11FIP3-204ENST00000449879 PHF23Q9BUL5 403 aaPredicted RBP25.27■■□□□ 1.64
RAB11FIP3-204ENST00000449879 PLEKHG1Q9ULL1 1385 aa25.27■■□□□ 1.64
RAB11FIP3-204ENST00000449879 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.26■■□□□ 1.63
RAB11FIP3-204ENST00000449879 IQGAP3Q86VI3 1631 aa25.25■■□□□ 1.63
RAB11FIP3-204ENST00000449879 FAM135BQ49AJ0 1406 aa25.22■■□□□ 1.63
RAB11FIP3-204ENST00000449879 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
RAB11FIP3-204ENST00000449879 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
RAB11FIP3-204ENST00000449879 MSH6P52701 1360 aa25.18■■□□□ 1.62
RAB11FIP3-204ENST00000449879 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
RAB11FIP3-204ENST00000449879 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
RAB11FIP3-204ENST00000449879 SLAIN2Q9P270 581 aa25.15■■□□□ 1.62
RAB11FIP3-204ENST00000449879 ADAMTS13Q76LX8 1427 aa25.13■■□□□ 1.61
RAB11FIP3-204ENST00000449879 C14orf37Q86TY3 774 aa25.13■■□□□ 1.61
RAB11FIP3-204ENST00000449879 RRBP1Q9P2E9 1410 aaKnown RBP25.12■■□□□ 1.61
RAB11FIP3-204ENST00000449879 ROBO1Q9Y6N7 1651 aa25.11■■□□□ 1.61
RAB11FIP3-204ENST00000449879 ZNF326Q5BKZ1 582 aaKnown RBP25.11■■□□□ 1.61
RAB11FIP3-204ENST00000449879 AMOTL2Q9Y2J4 779 aa25.08■■□□□ 1.61
RAB11FIP3-204ENST00000449879 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
RAB11FIP3-204ENST00000449879 NAIPQ13075 1403 aa25.06■■□□□ 1.6
RAB11FIP3-204ENST00000449879 SPHKAPQ2M3C7 1700 aa25.06■■□□□ 1.6
RAB11FIP3-204ENST00000449879 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
RAB11FIP3-204ENST00000449879 TRIM52Q96A61 297 aa25.05■■□□□ 1.6
RAB11FIP3-204ENST00000449879 RGS17Q9UGC6 210 aaPredicted RBP25.05■■□□□ 1.6
RAB11FIP3-204ENST00000449879 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
RAB11FIP3-204ENST00000449879 C19orf44Q9H6X5 657 aa25.04■■□□□ 1.6
RAB11FIP3-204ENST00000449879 ATF3P18847 181 aa25.02■■□□□ 1.6
RAB11FIP3-204ENST00000449879 TRPM2O94759 1503 aa25.02■■□□□ 1.6
RAB11FIP3-204ENST00000449879 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
RAB11FIP3-204ENST00000449879 PTPRUQ92729 1446 aa25.01■■□□□ 1.59
RAB11FIP3-204ENST00000449879 PHLPP1O60346 1717 aa24.97■■□□□ 1.59
RAB11FIP3-204ENST00000449879 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.96■■□□□ 1.59
RAB11FIP3-204ENST00000449879 CLTCL1P53675 1640 aa24.96■■□□□ 1.59
RAB11FIP3-204ENST00000449879 SLC4A1APQ9BWU0 796 aaKnown RBP24.95■■□□□ 1.58
RAB11FIP3-204ENST00000449879 HFM1A2PYH4 1435 aa24.95■■□□□ 1.58
RAB11FIP3-204ENST00000449879 METP08581 1390 aa24.94■■□□□ 1.58
RAB11FIP3-204ENST00000449879 JCADQ9P266 1359 aa24.94■■□□□ 1.58
RAB11FIP3-204ENST00000449879 NRXN3Q9Y4C0 1643 aa24.94■■□□□ 1.58
RAB11FIP3-204ENST00000449879 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
RAB11FIP3-204ENST00000449879 POTEAQ6S8J7 498 aa24.92■■□□□ 1.58
RAB11FIP3-204ENST00000449879 KIF1BO60333 1816 aa24.9■■□□□ 1.58
RAB11FIP3-204ENST00000449879 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
RAB11FIP3-204ENST00000449879 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
RAB11FIP3-204ENST00000449879 BRINP3Q76B58 766 aa24.88■■□□□ 1.57
RAB11FIP3-204ENST00000449879 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
RAB11FIP3-204ENST00000449879 XRN1Q8IZH2 1706 aaKnown RBP24.86■■□□□ 1.57
RAB11FIP3-204ENST00000449879 FOXD1Q16676 465 aa24.85■■□□□ 1.57
RAB11FIP3-204ENST00000449879 DCCP43146 1447 aa24.84■■□□□ 1.57
RAB11FIP3-204ENST00000449879 RPGRIP1LQ68CZ1 1315 aa24.83■■□□□ 1.56
RAB11FIP3-204ENST00000449879 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
RAB11FIP3-204ENST00000449879 MEX3CQ5U5Q3 659 aaKnown RBP24.81■■□□□ 1.56
RAB11FIP3-204ENST00000449879 AHDC1Q5TGY3 1603 aaPredicted RBP24.81■■□□□ 1.56
RAB11FIP3-204ENST00000449879 MST1RQ04912 1400 aa24.79■■□□□ 1.56
RAB11FIP3-204ENST00000449879 ADGRL3Q9HAR2 1447 aa24.78■■□□□ 1.56
RAB11FIP3-204ENST00000449879 NUTM2BA6NNL0 878 aaPredicted RBP24.76■■□□□ 1.55
RAB11FIP3-204ENST00000449879 NUTM2EB1AL46 878 aaPredicted RBP24.76■■□□□ 1.55
RAB11FIP3-204ENST00000449879 NUTM2AQ8IVF1 878 aaPredicted RBP24.76■■□□□ 1.55
RAB11FIP3-204ENST00000449879 ASXL1Q8IXJ9 1541 aa24.76■■□□□ 1.55
RAB11FIP3-204ENST00000449879 LRP6O75581 1613 aa24.75■■□□□ 1.55
RAB11FIP3-204ENST00000449879 RGL3Q3MIN7 710 aa24.75■■□□□ 1.55
RAB11FIP3-204ENST00000449879 DDX17Q92841 729 aaKnown RBP24.75■■□□□ 1.55
RAB11FIP3-204ENST00000449879 MPHOSPH9Q99550 1183 aa24.75■■□□□ 1.55
RAB11FIP3-204ENST00000449879 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
RAB11FIP3-204ENST00000449879 LRRC59Q96AG4 307 aaKnown RBP24.72■■□□□ 1.55
RAB11FIP3-204ENST00000449879 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
RAB11FIP3-204ENST00000449879 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
RAB11FIP3-204ENST00000449879 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
RAB11FIP3-204ENST00000449879 NALCNQ8IZF0 1738 aa24.71■■□□□ 1.55
RAB11FIP3-204ENST00000449879 PPLO60437 1756 aa24.7■■□□□ 1.54
RAB11FIP3-204ENST00000449879 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
RAB11FIP3-204ENST00000449879 ADGRF5Q8IZF2 1346 aa24.69■■□□□ 1.54
RAB11FIP3-204ENST00000449879 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
RAB11FIP3-204ENST00000449879 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
RAB11FIP3-204ENST00000449879 C1orf167Q5SNV9 1468 aa24.67■■□□□ 1.54
RAB11FIP3-204ENST00000449879 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
RAB11FIP3-204ENST00000449879 NHSL1Q5SYE7 1610 aa24.65■■□□□ 1.54
RAB11FIP3-204ENST00000449879 STK26Q9P289 416 aa24.64■■□□□ 1.54
RAB11FIP3-204ENST00000449879 SPATA31E1Q6ZUB1 1445 aa24.62■■□□□ 1.53
RAB11FIP3-204ENST00000449879 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
RAB11FIP3-204ENST00000449879 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
RAB11FIP3-204ENST00000449879 AFF2P51816 1311 aa24.61■■□□□ 1.53
RAB11FIP3-204ENST00000449879 PNPLA6Q8IY17 1366 aa24.6■■□□□ 1.53
RAB11FIP3-204ENST00000449879 TMEM132EQ6IEE7 984 aa24.6■■□□□ 1.53
RAB11FIP3-204ENST00000449879 RXRBP28702 533 aa24.59■■□□□ 1.53
RAB11FIP3-204ENST00000449879 WAPLQ7Z5K2 1190 aa24.59■■□□□ 1.53
RAB11FIP3-204ENST00000449879 C8orf37Q96NL8 207 aa24.59■■□□□ 1.53
RAB11FIP3-204ENST00000449879 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
RAB11FIP3-204ENST00000449879 SOS2Q07890 1332 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms