RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 SLC52A1Q9NWF4 448 aa21.57■■□□□ 1.04
CPSF7-207ENST00000449811 ANKRD30AQ9BXX3 1397 aa21.56■■□□□ 1.04
CPSF7-207ENST00000449811 COL16A1Q07092 1604 aaPredicted RBP21.54■■□□□ 1.04
CPSF7-207ENST00000449811 PLEKHG1Q9ULL1 1385 aa21.53■■□□□ 1.04
CPSF7-207ENST00000449811 CHIC2Q9UKJ5 165 aa21.53■■□□□ 1.04
CPSF7-207ENST00000449811 SPATA31A6Q5VVP1 1343 aa21.53■■□□□ 1.04
CPSF7-207ENST00000449811 LRP6O75581 1613 aa21.52■■□□□ 1.04
CPSF7-207ENST00000449811 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
CPSF7-207ENST00000449811 ZFYVE9O95405 1425 aa21.52■■□□□ 1.04
CPSF7-207ENST00000449811 FGD6Q6ZV73 1430 aa21.52■■□□□ 1.04
CPSF7-207ENST00000449811 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-207ENST00000449811 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-207ENST00000449811 UPF1Q92900 1129 aaKnown RBP eCLIP21.51■■□□□ 1.03
CPSF7-207ENST00000449811 CHD2O14647 1828 aaKnown RBP21.5■■□□□ 1.03
CPSF7-207ENST00000449811 NCOA3Q9Y6Q9 1424 aa21.49■■□□□ 1.03
CPSF7-207ENST00000449811 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
CPSF7-207ENST00000449811 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
CPSF7-207ENST00000449811 TRIM52Q96A61 297 aa21.49■■□□□ 1.03
CPSF7-207ENST00000449811 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
CPSF7-207ENST00000449811 RPRD2Q5VT52 1461 aaKnown RBP21.48■■□□□ 1.03
CPSF7-207ENST00000449811 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
CPSF7-207ENST00000449811 TBX22Q9Y458 520 aa21.46■■□□□ 1.03
CPSF7-207ENST00000449811 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
CPSF7-207ENST00000449811 APLP2Q06481 763 aa21.44■■□□□ 1.02
CPSF7-207ENST00000449811 CADPS2Q86UW7 1296 aa21.44■■□□□ 1.02
CPSF7-207ENST00000449811 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
CPSF7-207ENST00000449811 MYO5BQ9ULV0 1848 aa21.43■■□□□ 1.02
CPSF7-207ENST00000449811 TMEM131LA2VDJ0 1609 aa21.42■■□□□ 1.02
CPSF7-207ENST00000449811 ATF3P18847 181 aa21.42■■□□□ 1.02
CPSF7-207ENST00000449811 SHPRHQ149N8 1683 aa21.42■■□□□ 1.02
CPSF7-207ENST00000449811 C19orf44Q9H6X5 657 aa21.42■■□□□ 1.02
CPSF7-207ENST00000449811 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
CPSF7-207ENST00000449811 RXRBP28702 533 aa21.41■■□□□ 1.02
CPSF7-207ENST00000449811 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.41■■□□□ 1.02
CPSF7-207ENST00000449811 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.41■■□□□ 1.02
CPSF7-207ENST00000449811 ADAMTS13Q76LX8 1427 aa21.39■■□□□ 1.02
CPSF7-207ENST00000449811 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
CPSF7-207ENST00000449811 ANKRD50Q9ULJ7 1429 aa21.38■■□□□ 1.01
CPSF7-207ENST00000449811 PIK3R4Q99570 1358 aa21.37■■□□□ 1.01
CPSF7-207ENST00000449811 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
CPSF7-207ENST00000449811 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-207ENST00000449811 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-207ENST00000449811 NUTM2DQ5VT03 806 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-207ENST00000449811 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-207ENST00000449811 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
CPSF7-207ENST00000449811 CDK12Q9NYV4 1490 aaPredicted RBP21.36■■□□□ 1.01
CPSF7-207ENST00000449811 AFF2P51816 1311 aa21.32■■□□□ 1
CPSF7-207ENST00000449811 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
CPSF7-207ENST00000449811 TRPM2O94759 1503 aa21.31■■□□□ 1
CPSF7-207ENST00000449811 FAM50AQ14320 339 aaKnown RBP21.31■■□□□ 1
CPSF7-207ENST00000449811 DCCP43146 1447 aa21.3■■□□□ 1
CPSF7-207ENST00000449811 PTPRUQ92729 1446 aa21.29■■□□□ 1
CPSF7-207ENST00000449811 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
CPSF7-207ENST00000449811 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
CPSF7-207ENST00000449811 UNC13BO14795 1591 aa21.27■■□□□ 1
CPSF7-207ENST00000449811 E9PCH4 1651 aa21.26■□□□□ 0.99
CPSF7-207ENST00000449811 RGS12O14924 1447 aa21.25■□□□□ 0.99
CPSF7-207ENST00000449811 MST1RQ04912 1400 aa21.25■□□□□ 0.99
CPSF7-207ENST00000449811 SRCAPQ6ZRS2 3230 aa21.25■□□□□ 0.99
CPSF7-207ENST00000449811 LRRC59Q96AG4 307 aaKnown RBP21.25■□□□□ 0.99
CPSF7-207ENST00000449811 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
CPSF7-207ENST00000449811 NHSL1Q5SYE7 1610 aa21.23■□□□□ 0.99
CPSF7-207ENST00000449811 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
CPSF7-207ENST00000449811 QTRT2Q9H974 415 aaKnown RBP21.23■□□□□ 0.99
CPSF7-207ENST00000449811 XRN1Q8IZH2 1706 aaKnown RBP21.21■□□□□ 0.99
CPSF7-207ENST00000449811 PNPLA6Q8IY17 1366 aa21.21■□□□□ 0.99
CPSF7-207ENST00000449811 DDX17Q92841 729 aaKnown RBP21.19■□□□□ 0.98
CPSF7-207ENST00000449811 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
CPSF7-207ENST00000449811 IQGAP3Q86VI3 1631 aa21.18■□□□□ 0.98
CPSF7-207ENST00000449811 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
CPSF7-207ENST00000449811 ADGRL3Q9HAR2 1447 aa21.16■□□□□ 0.98
CPSF7-207ENST00000449811 METP08581 1390 aa21.16■□□□□ 0.98
CPSF7-207ENST00000449811 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
CPSF7-207ENST00000449811 NUP155O75694 1391 aa21.14■□□□□ 0.98
CPSF7-207ENST00000449811 ADAMTS2O95450 1211 aa21.14■□□□□ 0.97
CPSF7-207ENST00000449811 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
CPSF7-207ENST00000449811 ATAD2Q6PL18 1390 aa21.13■□□□□ 0.97
CPSF7-207ENST00000449811 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
CPSF7-207ENST00000449811 NALCNQ8IZF0 1738 aa21.09■□□□□ 0.97
CPSF7-207ENST00000449811 C1orf167Q5SNV9 1468 aa21.09■□□□□ 0.97
CPSF7-207ENST00000449811 USP21Q9UK80 565 aa21.09■□□□□ 0.97
CPSF7-207ENST00000449811 TRPC5Q9UL62 973 aaPredicted RBP21.07■□□□□ 0.96
CPSF7-207ENST00000449811 FOXD1Q16676 465 aa21.06■□□□□ 0.96
CPSF7-207ENST00000449811 SPHKAPQ2M3C7 1700 aa21.05■□□□□ 0.96
CPSF7-207ENST00000449811 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
CPSF7-207ENST00000449811 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-207ENST00000449811 LAMC1P11047 1609 aa21.04■□□□□ 0.96
CPSF7-207ENST00000449811 PTCH1Q13635 1447 aa21.04■□□□□ 0.96
CPSF7-207ENST00000449811 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
CPSF7-207ENST00000449811 ORAI2Q96SN7 254 aa21.02■□□□□ 0.96
CPSF7-207ENST00000449811 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
CPSF7-207ENST00000449811 EP400Q96L91 3159 aa21.02■□□□□ 0.96
CPSF7-207ENST00000449811 ATRNO75882 1429 aa21.01■□□□□ 0.95
CPSF7-207ENST00000449811 ITGAEP38570 1179 aa21■□□□□ 0.95
CPSF7-207ENST00000449811 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
CPSF7-207ENST00000449811 CLTCL1P53675 1640 aa20.97■□□□□ 0.95
CPSF7-207ENST00000449811 CCDC125Q86Z20 511 aa20.97■□□□□ 0.95
CPSF7-207ENST00000449811 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
CPSF7-207ENST00000449811 MYOM2P54296 1465 aa20.94■□□□□ 0.94
CPSF7-207ENST00000449811 BCL9LQ86UU0 1499 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms