RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RAPGEF3-205ENST00000449771 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
RAPGEF3-205ENST00000449771 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
RAPGEF3-205ENST00000449771 E9PSI1 815 aa17.21■□□□□ 0.35
RAPGEF3-205ENST00000449771 KLHL34Q8N239 644 aa17.21■□□□□ 0.35
RAPGEF3-205ENST00000449771 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
RAPGEF3-205ENST00000449771 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
RAPGEF3-205ENST00000449771 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
RAPGEF3-205ENST00000449771 ATF3P18847 181 aa17.2■□□□□ 0.34
RAPGEF3-205ENST00000449771 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
RAPGEF3-205ENST00000449771 APPP05067 770 aa17.19■□□□□ 0.34
RAPGEF3-205ENST00000449771 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
RAPGEF3-205ENST00000449771 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
RAPGEF3-205ENST00000449771 MCTP1Q6DN14 999 aa17.18■□□□□ 0.34
RAPGEF3-205ENST00000449771 TPM2P07951 284 aa17.17■□□□□ 0.34
RAPGEF3-205ENST00000449771 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
RAPGEF3-205ENST00000449771 USP47Q96K76 1375 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 PLIN1O60240 522 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 TRIM29Q14134 588 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 RIPK4P57078 832 aa17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF3-205ENST00000449771 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
RAPGEF3-205ENST00000449771 CWC22Q9HCG8 908 aaKnown RBP17.15■□□□□ 0.34
RAPGEF3-205ENST00000449771 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
RAPGEF3-205ENST00000449771 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
RAPGEF3-205ENST00000449771 WWC1Q8IX03 1113 aa17.14■□□□□ 0.34
RAPGEF3-205ENST00000449771 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.34
RAPGEF3-205ENST00000449771 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
RAPGEF3-205ENST00000449771 ATAD2BQ9ULI0 1458 aa17.14■□□□□ 0.33
RAPGEF3-205ENST00000449771 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
RAPGEF3-205ENST00000449771 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 APAF1O14727 1248 aa17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
RAPGEF3-205ENST00000449771 DDX11L8A8MPP1 907 aa17.12■□□□□ 0.33
RAPGEF3-205ENST00000449771 GSE1Q14687 1217 aa17.12■□□□□ 0.33
RAPGEF3-205ENST00000449771 ZKSCAN1P17029 563 aaPredicted RBP17.11■□□□□ 0.33
RAPGEF3-205ENST00000449771 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
RAPGEF3-205ENST00000449771 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
RAPGEF3-205ENST00000449771 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
RAPGEF3-205ENST00000449771 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
RAPGEF3-205ENST00000449771 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 NFXL1Q6ZNB6 911 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 TRDNQ13061 729 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 CPLX1O14810 134 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 ROCK1Q13464 1354 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
RAPGEF3-205ENST00000449771 TPM1P09493 284 aa17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 DHX57Q6P158 1386 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 ERICH2A1L162 156 aa17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 BECN2A8MW95 431 aa17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF3-205ENST00000449771 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.33
RAPGEF3-205ENST00000449771 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
RAPGEF3-205ENST00000449771 CCDC47Q96A33 483 aaKnown RBP17.08■□□□□ 0.32
RAPGEF3-205ENST00000449771 HMOX1P09601 288 aa17.08■□□□□ 0.32
RAPGEF3-205ENST00000449771 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
RAPGEF3-205ENST00000449771 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
RAPGEF3-205ENST00000449771 REC8O95072 547 aa17.07■□□□□ 0.32
RAPGEF3-205ENST00000449771 GAPVD1Q14C86 1478 aa17.06■□□□□ 0.32
RAPGEF3-205ENST00000449771 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
RAPGEF3-205ENST00000449771 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
RAPGEF3-205ENST00000449771 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
RAPGEF3-205ENST00000449771 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
RAPGEF3-205ENST00000449771 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 FYB1O15117 783 aa17.05■□□□□ 0.32
RAPGEF3-205ENST00000449771 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 GNAI1P63096 354 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
RAPGEF3-205ENST00000449771 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
RAPGEF3-205ENST00000449771 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.32
RAPGEF3-205ENST00000449771 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.31
RAPGEF3-205ENST00000449771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 PDE4AP27815 886 aa17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 ERC2O15083 957 aa17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 NLRP6P59044 892 aa17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 ZNF771Q7L3S4 317 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
RAPGEF3-205ENST00000449771 FOSBP53539 338 aa17■□□□□ 0.31
RAPGEF3-205ENST00000449771 WASHC4Q2M389 1173 aa17■□□□□ 0.31
RAPGEF3-205ENST00000449771 HOOK1Q9UJC3 728 aaKnown RBP17■□□□□ 0.31
RAPGEF3-205ENST00000449771 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms