RNA–Protein interactions for RNA: ENST00000448465.1

LINC00476-206, long intergenic non-protein coding RNA 476, humanhuman

TSL 3

Gene LINC00476, Length 290 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-206ENST00000448465 ADGRB3O60242 1522 aa12.97□□□□□ -0.33
LINC00476-206ENST00000448465 MEX3CQ5U5Q3 659 aaKnown RBP12.96□□□□□ -0.33
LINC00476-206ENST00000448465 LMTK2Q8IWU2 1503 aa12.96□□□□□ -0.33
LINC00476-206ENST00000448465 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
LINC00476-206ENST00000448465 DAPK1P53355 1430 aa12.95□□□□□ -0.34
LINC00476-206ENST00000448465 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
LINC00476-206ENST00000448465 PTPN23Q9H3S7 1636 aa12.95□□□□□ -0.34
LINC00476-206ENST00000448465 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
LINC00476-206ENST00000448465 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
LINC00476-206ENST00000448465 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00476-206ENST00000448465 SLC52A1Q9NWF4 448 aa12.94□□□□□ -0.34
LINC00476-206ENST00000448465 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
LINC00476-206ENST00000448465 NOS1P29475 1434 aa12.94□□□□□ -0.34
LINC00476-206ENST00000448465 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
LINC00476-206ENST00000448465 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
LINC00476-206ENST00000448465 LRP6O75581 1613 aa12.93□□□□□ -0.34
LINC00476-206ENST00000448465 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
LINC00476-206ENST00000448465 ANKRD30AQ9BXX3 1397 aa12.93□□□□□ -0.34
LINC00476-206ENST00000448465 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
LINC00476-206ENST00000448465 HDGFP51858 240 aaKnown RBP12.91□□□□□ -0.34
LINC00476-206ENST00000448465 PLEKHG1Q9ULL1 1385 aa12.91□□□□□ -0.34
LINC00476-206ENST00000448465 MYO5BQ9ULV0 1848 aa12.9□□□□□ -0.34
LINC00476-206ENST00000448465 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 ZFYVE9O95405 1425 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 ATF3P18847 181 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 RXRBP28702 533 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
LINC00476-206ENST00000448465 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
LINC00476-206ENST00000448465 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
LINC00476-206ENST00000448465 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
LINC00476-206ENST00000448465 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
LINC00476-206ENST00000448465 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
LINC00476-206ENST00000448465 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
LINC00476-206ENST00000448465 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
LINC00476-206ENST00000448465 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
LINC00476-206ENST00000448465 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
LINC00476-206ENST00000448465 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
LINC00476-206ENST00000448465 APLP2Q06481 763 aa12.87□□□□□ -0.35
LINC00476-206ENST00000448465 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
LINC00476-206ENST00000448465 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
LINC00476-206ENST00000448465 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
LINC00476-206ENST00000448465 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
LINC00476-206ENST00000448465 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00476-206ENST00000448465 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
LINC00476-206ENST00000448465 BRINP3Q76B58 766 aa12.83□□□□□ -0.36
LINC00476-206ENST00000448465 CDK12Q9NYV4 1490 aaPredicted RBP12.83□□□□□ -0.36
LINC00476-206ENST00000448465 AFF2P51816 1311 aa12.83□□□□□ -0.36
LINC00476-206ENST00000448465 DIP2AQ14689 1571 aa12.82□□□□□ -0.36
LINC00476-206ENST00000448465 ANKRD50Q9ULJ7 1429 aa12.82□□□□□ -0.36
LINC00476-206ENST00000448465 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
LINC00476-206ENST00000448465 PIK3R4Q99570 1358 aa12.81□□□□□ -0.36
LINC00476-206ENST00000448465 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
LINC00476-206ENST00000448465 TRPM2O94759 1503 aa12.8□□□□□ -0.36
LINC00476-206ENST00000448465 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
LINC00476-206ENST00000448465 ASXL1Q8IXJ9 1541 aa12.79□□□□□ -0.36
LINC00476-206ENST00000448465 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
LINC00476-206ENST00000448465 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
LINC00476-206ENST00000448465 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
LINC00476-206ENST00000448465 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
LINC00476-206ENST00000448465 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
LINC00476-206ENST00000448465 E9PCH4 1651 aa12.77□□□□□ -0.36
LINC00476-206ENST00000448465 RBM6P78332 1123 aaKnown RBP12.77□□□□□ -0.37
LINC00476-206ENST00000448465 RGS12O14924 1447 aa12.77□□□□□ -0.37
LINC00476-206ENST00000448465 DCCP43146 1447 aa12.77□□□□□ -0.37
LINC00476-206ENST00000448465 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.37
LINC00476-206ENST00000448465 MST1RQ04912 1400 aa12.76□□□□□ -0.37
LINC00476-206ENST00000448465 UNC13BO14795 1591 aa12.76□□□□□ -0.37
LINC00476-206ENST00000448465 DDX17Q92841 729 aaKnown RBP12.74□□□□□ -0.37
LINC00476-206ENST00000448465 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
LINC00476-206ENST00000448465 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
LINC00476-206ENST00000448465 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
LINC00476-206ENST00000448465 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
LINC00476-206ENST00000448465 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.37
LINC00476-206ENST00000448465 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.37
LINC00476-206ENST00000448465 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
LINC00476-206ENST00000448465 SETBP1Q9Y6X0 1596 aa12.7□□□□□ -0.38
LINC00476-206ENST00000448465 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
LINC00476-206ENST00000448465 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
LINC00476-206ENST00000448465 NUP155O75694 1391 aa12.69□□□□□ -0.38
LINC00476-206ENST00000448465 METP08581 1390 aa12.69□□□□□ -0.38
LINC00476-206ENST00000448465 USP21Q9UK80 565 aa12.69□□□□□ -0.38
LINC00476-206ENST00000448465 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
LINC00476-206ENST00000448465 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
LINC00476-206ENST00000448465 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
LINC00476-206ENST00000448465 C1orf167Q5SNV9 1468 aa12.65□□□□□ -0.38
LINC00476-206ENST00000448465 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
LINC00476-206ENST00000448465 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
LINC00476-206ENST00000448465 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
LINC00476-206ENST00000448465 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
LINC00476-206ENST00000448465 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
LINC00476-206ENST00000448465 LAMC1P11047 1609 aa12.63□□□□□ -0.39
LINC00476-206ENST00000448465 ITGAEP38570 1179 aa12.63□□□□□ -0.39
LINC00476-206ENST00000448465 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
LINC00476-206ENST00000448465 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
LINC00476-206ENST00000448465 NEXMIFQ5QGS0 1516 aa12.61□□□□□ -0.39
LINC00476-206ENST00000448465 ATRNO75882 1429 aa12.61□□□□□ -0.39
LINC00476-206ENST00000448465 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
LINC00476-206ENST00000448465 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
LINC00476-206ENST00000448465 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms