RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 MTERF4Q7Z6M4 381 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 CDK13Q14004 1512 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 UQCRHLA0A096LP55 91 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 UQCRHP07919 91 aa11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-204ENST00000448416 PRDM10Q9NQV6 1147 aa11.85□□□□□ -0.51
SYNPO2-204ENST00000448416 NESP48681 1621 aa11.85□□□□□ -0.51
SYNPO2-204ENST00000448416 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
SYNPO2-204ENST00000448416 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
SYNPO2-204ENST00000448416 E9PSI1 815 aa11.84□□□□□ -0.51
SYNPO2-204ENST00000448416 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
SYNPO2-204ENST00000448416 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
SYNPO2-204ENST00000448416 APAF1O14727 1248 aa11.84□□□□□ -0.51
SYNPO2-204ENST00000448416 PTMSP20962 102 aa11.84□□□□□ -0.51
SYNPO2-204ENST00000448416 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
SYNPO2-204ENST00000448416 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
SYNPO2-204ENST00000448416 PDE4CQ08493 712 aa11.83□□□□□ -0.52
SYNPO2-204ENST00000448416 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
SYNPO2-204ENST00000448416 NUP155O75694 1391 aa11.82□□□□□ -0.52
SYNPO2-204ENST00000448416 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
SYNPO2-204ENST00000448416 NINLQ9Y2I6 1382 aa11.82□□□□□ -0.52
SYNPO2-204ENST00000448416 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
SYNPO2-204ENST00000448416 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
SYNPO2-204ENST00000448416 TMF1P82094 1093 aa11.81□□□□□ -0.52
SYNPO2-204ENST00000448416 DYNC1I1O14576 645 aa11.81□□□□□ -0.52
SYNPO2-204ENST00000448416 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
SYNPO2-204ENST00000448416 XPCQ01831 940 aaPredicted RBP11.81□□□□□ -0.52
SYNPO2-204ENST00000448416 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
SYNPO2-204ENST00000448416 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 GOLGA6L22H0YM25 854 aa11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 TESK2Q96S53 571 aa11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
SYNPO2-204ENST00000448416 DDIT3P35638 169 aa11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 RTEL1-TNFRSF6BF6WH68 1400 aa11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 ZNF500O60304 480 aaPredicted RBP11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 NCLP19338 710 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 HS1BP3Q53T59 392 aa11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 NOL7Q9UMY1 257 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 DDX49Q9Y6V7 483 aaKnown RBP11.79□□□□□ -0.52
SYNPO2-204ENST00000448416 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 DMTNQ08495 405 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 UTP14CQ5TAP6 766 aaKnown RBP11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 CFDP1Q9UEE9 299 aaPredicted RBP11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 ERBINQ96RT1 1412 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 ANKRD50Q9ULJ7 1429 aa11.78□□□□□ -0.52
SYNPO2-204ENST00000448416 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.52
SYNPO2-204ENST00000448416 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-204ENST00000448416 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
SYNPO2-204ENST00000448416 CCDC94Q9BW85 323 aaPredicted RBP11.77□□□□□ -0.53
SYNPO2-204ENST00000448416 SNX21Q969T3 373 aa11.76□□□□□ -0.53
SYNPO2-204ENST00000448416 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
SYNPO2-204ENST00000448416 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
SYNPO2-204ENST00000448416 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
SYNPO2-204ENST00000448416 PRAG1Q86YV5 1406 aa11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 SASS6Q6UVJ0 657 aa11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 RLBP1P12271 317 aa11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
SYNPO2-204ENST00000448416 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
SYNPO2-204ENST00000448416 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
SYNPO2-204ENST00000448416 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
SYNPO2-204ENST00000448416 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
SYNPO2-204ENST00000448416 SSFA2P28290 1259 aa11.73□□□□□ -0.53
SYNPO2-204ENST00000448416 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
SYNPO2-204ENST00000448416 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 WDR62O43379 1518 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 ZNF445P59923 1031 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
SYNPO2-204ENST00000448416 MCM5P33992 734 aa11.71□□□□□ -0.53
SYNPO2-204ENST00000448416 CAVIN1Q6NZI2 390 aaKnown RBP11.71□□□□□ -0.53
SYNPO2-204ENST00000448416 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SYNPO2-204ENST00000448416 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.53
SYNPO2-204ENST00000448416 PIK3C2GO75747 1445 aa11.71□□□□□ -0.53
SYNPO2-204ENST00000448416 NEUROD2Q15784 382 aa11.71□□□□□ -0.54
SYNPO2-204ENST00000448416 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms