RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 TRAK2O60296 914 aa20.47■□□□□ 0.87
CNOT3-204ENST00000447684 TESK2Q96S53 571 aa20.47■□□□□ 0.87
CNOT3-204ENST00000447684 PLB1Q6P1J6 1458 aa20.47■□□□□ 0.87
CNOT3-204ENST00000447684 PANK1Q8TE04 598 aa20.46■□□□□ 0.87
CNOT3-204ENST00000447684 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
CNOT3-204ENST00000447684 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
CNOT3-204ENST00000447684 ESPNB1AK53 854 aa20.45■□□□□ 0.86
CNOT3-204ENST00000447684 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
CNOT3-204ENST00000447684 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
CNOT3-204ENST00000447684 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
CNOT3-204ENST00000447684 ZNF521Q96K83 1311 aa20.44■□□□□ 0.86
CNOT3-204ENST00000447684 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
CNOT3-204ENST00000447684 MRE11P49959 708 aa20.44■□□□□ 0.86
CNOT3-204ENST00000447684 KNSTRNQ9Y448 316 aa20.44■□□□□ 0.86
CNOT3-204ENST00000447684 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
CNOT3-204ENST00000447684 APAF1O14727 1248 aa20.43■□□□□ 0.86
CNOT3-204ENST00000447684 CLUAP1Q96AJ1 413 aa20.43■□□□□ 0.86
CNOT3-204ENST00000447684 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 TMF1P82094 1093 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 A2MP01023 1474 aa20.42■□□□□ 0.86
CNOT3-204ENST00000447684 GRPEL1Q9HAV7 217 aa20.41■□□□□ 0.86
CNOT3-204ENST00000447684 EIF2AK4Q9P2K8 1649 aaKnown RBP20.41■□□□□ 0.86
CNOT3-204ENST00000447684 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
CNOT3-204ENST00000447684 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
CNOT3-204ENST00000447684 ARHGEF5Q12774 1597 aa20.4■□□□□ 0.86
CNOT3-204ENST00000447684 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
CNOT3-204ENST00000447684 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
CNOT3-204ENST00000447684 CHMP5Q9NZZ3 219 aa20.37■□□□□ 0.85
CNOT3-204ENST00000447684 NLRP1Q9C000 1473 aa20.36■□□□□ 0.85
CNOT3-204ENST00000447684 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
CNOT3-204ENST00000447684 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
CNOT3-204ENST00000447684 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
CNOT3-204ENST00000447684 CENPJQ9HC77 1338 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-204ENST00000447684 NUP160Q12769 1436 aa20.35■□□□□ 0.85
CNOT3-204ENST00000447684 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
CNOT3-204ENST00000447684 PLA2R1Q13018 1463 aa20.34■□□□□ 0.85
CNOT3-204ENST00000447684 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
CNOT3-204ENST00000447684 CCDC141Q6ZP82 1450 aa20.34■□□□□ 0.85
CNOT3-204ENST00000447684 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
CNOT3-204ENST00000447684 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
CNOT3-204ENST00000447684 MAGI2Q86UL8 1455 aa20.33■□□□□ 0.85
CNOT3-204ENST00000447684 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.85
CNOT3-204ENST00000447684 E9PSI1 815 aa20.33■□□□□ 0.85
CNOT3-204ENST00000447684 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.85
CNOT3-204ENST00000447684 IFT140Q96RY7 1462 aa20.33■□□□□ 0.85
CNOT3-204ENST00000447684 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.85
CNOT3-204ENST00000447684 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
CNOT3-204ENST00000447684 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
CNOT3-204ENST00000447684 UNC13BO14795 1591 aa20.32■□□□□ 0.84
CNOT3-204ENST00000447684 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
CNOT3-204ENST00000447684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.31■□□□□ 0.843e-9■■■□□ 16.8
CNOT3-204ENST00000447684 ABCA8O94911 1581 aa20.31■□□□□ 0.84
CNOT3-204ENST00000447684 HNRNPMP52272 730 aaKnown RBP eCLIP20.3■□□□□ 0.84
CNOT3-204ENST00000447684 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
CNOT3-204ENST00000447684 C22orf23Q9BZE7 217 aa20.3■□□□□ 0.84
CNOT3-204ENST00000447684 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
CNOT3-204ENST00000447684 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
CNOT3-204ENST00000447684 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
CNOT3-204ENST00000447684 DDX11L8A8MPP1 907 aa20.29■□□□□ 0.84
CNOT3-204ENST00000447684 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
CNOT3-204ENST00000447684 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
CNOT3-204ENST00000447684 TPM2P07951 284 aa20.28■□□□□ 0.84
CNOT3-204ENST00000447684 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
CNOT3-204ENST00000447684 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
CNOT3-204ENST00000447684 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
CNOT3-204ENST00000447684 RBM10P98175 930 aaKnown RBP20.27■□□□□ 0.84
CNOT3-204ENST00000447684 PDCL3Q9H2J4 239 aa20.27■□□□□ 0.84
CNOT3-204ENST00000447684 SYNMO15061 1565 aa20.27■□□□□ 0.83
CNOT3-204ENST00000447684 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.83
CNOT3-204ENST00000447684 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.83
CNOT3-204ENST00000447684 GAS2L3Q86XJ1 694 aa20.26■□□□□ 0.83
CNOT3-204ENST00000447684 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
CNOT3-204ENST00000447684 ATP10BO94823 1461 aa20.25■□□□□ 0.83
CNOT3-204ENST00000447684 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
CNOT3-204ENST00000447684 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
CNOT3-204ENST00000447684 RLBP1P12271 317 aa20.23■□□□□ 0.83
CNOT3-204ENST00000447684 ARID3AQ99856 593 aa20.23■□□□□ 0.83
CNOT3-204ENST00000447684 NINLQ9Y2I6 1382 aa20.23■□□□□ 0.83
CNOT3-204ENST00000447684 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
CNOT3-204ENST00000447684 RWDD1Q9H446 243 aaPredicted RBP20.22■□□□□ 0.83
CNOT3-204ENST00000447684 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
CNOT3-204ENST00000447684 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
CNOT3-204ENST00000447684 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
CNOT3-204ENST00000447684 ATP10AO60312 1499 aa20.22■□□□□ 0.83
CNOT3-204ENST00000447684 PLXNC1O60486 1568 aa20.21■□□□□ 0.83
CNOT3-204ENST00000447684 CDC42BPBQ9Y5S2 1711 aa20.2■□□□□ 0.82
CNOT3-204ENST00000447684 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
CNOT3-204ENST00000447684 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
CNOT3-204ENST00000447684 NPC1L1Q9UHC9 1359 aa20.19■□□□□ 0.82
CNOT3-204ENST00000447684 RSPH4AQ5TD94 716 aa20.19■□□□□ 0.82
CNOT3-204ENST00000447684 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
CNOT3-204ENST00000447684 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
CNOT3-204ENST00000447684 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
CNOT3-204ENST00000447684 MYOM1P52179 1685 aa20.18■□□□□ 0.82
CNOT3-204ENST00000447684 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
CNOT3-204ENST00000447684 WWC1Q8IX03 1113 aa20.17■□□□□ 0.82
CNOT3-204ENST00000447684 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms