RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
HMGB1P16-201ENST00000447155 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
HMGB1P16-201ENST00000447155 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1.01
HMGB1P16-201ENST00000447155 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
HMGB1P16-201ENST00000447155 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
HMGB1P16-201ENST00000447155 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
HMGB1P16-201ENST00000447155 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
HMGB1P16-201ENST00000447155 CLK2P49760 499 aaKnown RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 RDH13Q8NBN7 331 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 SPIRE2Q8WWL2 714 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 SEPT9Q9UHD8 586 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P16-201ENST00000447155 TK2O00142 265 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 FLIIQ13045 1269 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P16-201ENST00000447155 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
HMGB1P16-201ENST00000447155 POTEB3A0JP26 581 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 POTEBQ6S5H4 581 aa8.71□□□□□ -1.02
HMGB1P16-201ENST00000447155 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
HMGB1P16-201ENST00000447155 SPTLC1O15269 473 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 GJA5P36382 358 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 USP46P62068 366 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
HMGB1P16-201ENST00000447155 KDM4AO75164 1064 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLC10A3P09131 477 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 GCGRP47871 477 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
HMGB1P16-201ENST00000447155 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
HMGB1P16-201ENST00000447155 SAMD7Q7Z3H4 446 aa8.67□□□□□ -1.02
HMGB1P16-201ENST00000447155 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
HMGB1P16-201ENST00000447155 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
HMGB1P16-201ENST00000447155 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
HMGB1P16-201ENST00000447155 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
HMGB1P16-201ENST00000447155 NDUFV2P19404 249 aa8.64□□□□□ -1.03
HMGB1P16-201ENST00000447155 HOXA2O43364 376 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 HRO43593 1189 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 RFC5P40937 340 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 MCM6Q14566 821 aa8.63□□□□□ -1.03
HMGB1P16-201ENST00000447155 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 BANK1Q8NDB2 785 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
HMGB1P16-201ENST00000447155 LILRB3O75022 631 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 RNF40O75150 1001 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 CFHP08603 1231 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 LRCH3Q96II8 777 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
HMGB1P16-201ENST00000447155 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 SUPT5HO00267 1087 aaKnown RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 FDX1P10109 184 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 QPCTQ16769 361 aa8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P16-201ENST00000447155 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
HMGB1P16-201ENST00000447155 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 FUT2Q10981 343 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
HMGB1P16-201ENST00000447155 A6NJR5 290 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 HRCP23327 699 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 CABLES1Q8TDN4 633 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
HMGB1P16-201ENST00000447155 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
HMGB1P16-201ENST00000447155 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
HMGB1P16-201ENST00000447155 SOCS7O14512 581 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 AP1G2O75843 785 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 MTMR2Q13614 643 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 CLUAP1Q96AJ1 413 aa8.54□□□□□ -1.04
HMGB1P16-201ENST00000447155 RAD21O60216 631 aa8.53□□□□□ -1.04
HMGB1P16-201ENST00000447155 PPP4CP60510 307 aa8.53□□□□□ -1.04
HMGB1P16-201ENST00000447155 WNT2BQ93097 391 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms