RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 CLUAP1Q96AJ1 413 aa19.67■□□□□ 0.74
SIK3-205ENST00000446921 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
SIK3-205ENST00000446921 TRIM34Q9BYJ4 488 aa19.66■□□□□ 0.74
SIK3-205ENST00000446921 KIF3AQ9Y496 699 aa19.66■□□□□ 0.74
SIK3-205ENST00000446921 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 CHMP4CQ96CF2 233 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 BCCIPQ9P287 314 aaKnown RBP eCLIP19.65■□□□□ 0.74
SIK3-205ENST00000446921 ERICH4A6NGS2 130 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 RGS22Q8NE09 1264 aa19.65■□□□□ 0.74
SIK3-205ENST00000446921 ARID3CA6NKF2 412 aa19.64■□□□□ 0.74
SIK3-205ENST00000446921 ATP2B3Q16720 1220 aa19.64■□□□□ 0.74
SIK3-205ENST00000446921 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
SIK3-205ENST00000446921 ZNF500O60304 480 aaPredicted RBP19.63■□□□□ 0.73
SIK3-205ENST00000446921 HMGN5P82970 282 aaKnown RBP19.63■□□□□ 0.73
SIK3-205ENST00000446921 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
SIK3-205ENST00000446921 CLGNO14967 610 aa19.62■□□□□ 0.73
SIK3-205ENST00000446921 ROCK2O75116 1388 aaKnown RBP19.62■□□□□ 0.73
SIK3-205ENST00000446921 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
SIK3-205ENST00000446921 TIAM1Q13009 1591 aa19.62■□□□□ 0.73
SIK3-205ENST00000446921 U2AF2P26368 475 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■□□ 16.2
SIK3-205ENST00000446921 NEUROD2Q15784 382 aa19.61■□□□□ 0.73
SIK3-205ENST00000446921 CGNL1Q0VF96 1302 aa19.61■□□□□ 0.73
SIK3-205ENST00000446921 SSFA2P28290 1259 aa19.61■□□□□ 0.73
SIK3-205ENST00000446921 HFM1A2PYH4 1435 aa19.6■□□□□ 0.73
SIK3-205ENST00000446921 MYCNP04198 464 aaPredicted RBP19.6■□□□□ 0.73
SIK3-205ENST00000446921 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
SIK3-205ENST00000446921 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
SIK3-205ENST00000446921 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
SIK3-205ENST00000446921 NBPF1Q3BBV0 1214 aa19.59■□□□□ 0.73
SIK3-205ENST00000446921 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
SIK3-205ENST00000446921 DUSP27Q5VZP5 1158 aa19.58■□□□□ 0.72
SIK3-205ENST00000446921 MYRIPQ8NFW9 859 aa19.58■□□□□ 0.72
SIK3-205ENST00000446921 BCL2L13Q9BXK5 485 aa19.58■□□□□ 0.72
SIK3-205ENST00000446921 RBSNQ9H1K0 784 aa19.58■□□□□ 0.72
SIK3-205ENST00000446921 HS1BP3Q53T59 392 aa19.57■□□□□ 0.72
SIK3-205ENST00000446921 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
SIK3-205ENST00000446921 NAIPQ13075 1403 aa19.57■□□□□ 0.72
SIK3-205ENST00000446921 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
SIK3-205ENST00000446921 PRIM1P49642 420 aaKnown RBP19.55■□□□□ 0.72
SIK3-205ENST00000446921 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
SIK3-205ENST00000446921 TIGD1Q96MW7 591 aa19.55■□□□□ 0.72
SIK3-205ENST00000446921 PRPF40AO75400 957 aaKnown RBP19.54■□□□□ 0.72
SIK3-205ENST00000446921 IRX5P78411 483 aaPredicted RBP19.54■□□□□ 0.72
SIK3-205ENST00000446921 RBM27Q9P2N5 1060 aaKnown RBP19.54■□□□□ 0.72
SIK3-205ENST00000446921 KLHL40Q2TBA0 621 aa19.53■□□□□ 0.72
SIK3-205ENST00000446921 MCM5P33992 734 aa19.53■□□□□ 0.72
SIK3-205ENST00000446921 ZSCAN23Q3MJ62 389 aa19.53■□□□□ 0.72
SIK3-205ENST00000446921 PTPRKQ15262 1439 aa19.52■□□□□ 0.72
SIK3-205ENST00000446921 SYCE3A1L190 88 aa19.52■□□□□ 0.72
SIK3-205ENST00000446921 C17orf53Q8N3J3 647 aaPredicted RBP19.52■□□□□ 0.72
SIK3-205ENST00000446921 CIZ1Q9ULV3 898 aaPredicted RBP19.52■□□□□ 0.72
SIK3-205ENST00000446921 PRIMPOLQ96LW4 560 aa19.51■□□□□ 0.71
SIK3-205ENST00000446921 APAF1O14727 1248 aa19.5■□□□□ 0.71
SIK3-205ENST00000446921 RAB3GAP1Q15042 981 aa19.5■□□□□ 0.71
SIK3-205ENST00000446921 SOX12O15370 315 aa19.5■□□□□ 0.71
SIK3-205ENST00000446921 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
SIK3-205ENST00000446921 BAG4O95429 457 aaKnown RBP19.49■□□□□ 0.71
SIK3-205ENST00000446921 HSP90B1P14625 803 aaKnown RBP19.49■□□□□ 0.71
SIK3-205ENST00000446921 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■■■□ 20.5
SIK3-205ENST00000446921 ZNF526Q8TF50 670 aaPredicted RBP19.48■□□□□ 0.71
SIK3-205ENST00000446921 FOXD4L6Q3SYB3 417 aaPredicted RBP19.47■□□□□ 0.71
SIK3-205ENST00000446921 FOXD4L3Q6VB84 417 aaPredicted RBP19.47■□□□□ 0.71
SIK3-205ENST00000446921 GPATCH11Q8N954 259 aa19.47■□□□□ 0.71
SIK3-205ENST00000446921 DIAPH3Q9NSV4 1193 aa19.47■□□□□ 0.71
SIK3-205ENST00000446921 NOLC1Q14978 699 aaKnown RBP eCLIP19.47■□□□□ 0.71
SIK3-205ENST00000446921 ZNF710Q8N1W2 664 aa19.47■□□□□ 0.71
SIK3-205ENST00000446921 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
SIK3-205ENST00000446921 TNNT1P13805 278 aa19.45■□□□□ 0.7
SIK3-205ENST00000446921 PABPN1Q86U42 306 aaKnown RBP eCLIP19.45■□□□□ 0.7
SIK3-205ENST00000446921 TTC12Q9H892 705 aaPredicted RBP19.45■□□□□ 0.7
SIK3-205ENST00000446921 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.45■□□□□ 0.7
SIK3-205ENST00000446921 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
SIK3-205ENST00000446921 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 PCDHB15Q9Y5E8 787 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 TMX1Q9H3N1 280 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 KCNG1Q9UIX4 513 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 KDM5BQ9UGL1 1544 aa19.43■□□□□ 0.7
SIK3-205ENST00000446921 EIF3AQ14152 1382 aaKnown RBP19.42■□□□□ 0.7
SIK3-205ENST00000446921 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
SIK3-205ENST00000446921 LMOD3Q0VAK6 560 aa19.42■□□□□ 0.7
SIK3-205ENST00000446921 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
SIK3-205ENST00000446921 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
SIK3-205ENST00000446921 K7ELQ4 463 aaPredicted RBP19.42■□□□□ 0.7
SIK3-205ENST00000446921 CALCOCO1Q9P1Z2 691 aa19.42■□□□□ 0.7
SIK3-205ENST00000446921 BANK1Q8NDB2 785 aa19.41■□□□□ 0.7
SIK3-205ENST00000446921 PTPN23Q9H3S7 1636 aa19.41■□□□□ 0.7
SIK3-205ENST00000446921 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
SIK3-205ENST00000446921 GTF2A1P52655 376 aaPredicted RBP19.4■□□□□ 0.7
SIK3-205ENST00000446921 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
SIK3-205ENST00000446921 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
SIK3-205ENST00000446921 RGL3Q3MIN7 710 aa19.39■□□□□ 0.7
SIK3-205ENST00000446921 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.7
SIK3-205ENST00000446921 ZNF445P59923 1031 aa19.39■□□□□ 0.69
SIK3-205ENST00000446921 AXDND1Q5T1B0 1012 aaPredicted RBP19.39■□□□□ 0.69
SIK3-205ENST00000446921 OGFRQ9NZT2 677 aa19.39■□□□□ 0.69
SIK3-205ENST00000446921 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
SIK3-205ENST00000446921 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms