RNA–Protein interactions for RNA: ENST00000446803.6

TBC1D1-209, Transcript of TBC1 domain family member 1, human

TSL 2

Gene TBC1D1, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBC1D1-209	ENST00000446803	LAMC1	P11047	1609 aa		32.8	■■■□□ 2.84
TBC1D1-209	ENST00000446803	STAG3	Q9UJ98	1225 aa		32.8	■■■□□ 2.84
TBC1D1-209	ENST00000446803	NEXMIF	Q5QGS0	1516 aa		32.78	■■■□□ 2.84
TBC1D1-209	ENST00000446803	NRXN1	Q9ULB1	1477 aa		32.77	■■■□□ 2.84
TBC1D1-209	ENST00000446803	KIAA1210	Q9ULL0	1709 aa		32.77	■■■□□ 2.84
TBC1D1-209	ENST00000446803	C3	P01024	1663 aa		32.77	■■■□□ 2.84
TBC1D1-209	ENST00000446803	DDX10	Q13206	875 aa	Known RBP	32.76	■■■□□ 2.84
TBC1D1-209	ENST00000446803	CEBPA	P49715	358 aa	Predicted RBP	32.76	■■■□□ 2.83
TBC1D1-209	ENST00000446803	TNR	Q92752	1358 aa		32.75	■■■□□ 2.83
TBC1D1-209	ENST00000446803	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.75	■■■□□ 2.83
TBC1D1-209	ENST00000446803	VGF	O15240	615 aa	Predicted RBP	32.72	■■■□□ 2.83
TBC1D1-209	ENST00000446803	CFAP70	Q5T0N1	1121 aa		32.72	■■■□□ 2.83
TBC1D1-209	ENST00000446803	WASHC2A	Q641Q2	1341 aa		32.72	■■■□□ 2.83
TBC1D1-209	ENST00000446803	ST20-MTHFS	A0A0A6YYL1	179 aa		32.72	■■■□□ 2.83
TBC1D1-209	ENST00000446803	C11orf95	C9JLR9	678 aa	Predicted RBP	32.71	■■■□□ 2.83
TBC1D1-209	ENST00000446803	PLPPR3	Q6T4P5	718 aa		32.71	■■■□□ 2.83
TBC1D1-209	ENST00000446803	PIK3C2G	O75747	1445 aa		32.69	■■■□□ 2.82
TBC1D1-209	ENST00000446803	POLR1A	O95602	1720 aa	Predicted RBP	32.69	■■■□□ 2.82
TBC1D1-209	ENST00000446803	A2ML1	A8K2U0	1454 aa		32.68	■■■□□ 2.82
TBC1D1-209	ENST00000446803	RIMS1	Q86UR5	1692 aa	Known RBP	32.65	■■■□□ 2.82
TBC1D1-209	ENST00000446803	IQGAP1	P46940	1657 aa		32.65	■■■□□ 2.82
TBC1D1-209	ENST00000446803	CCDC7	Q96M83	1385 aa		32.64	■■■□□ 2.82
TBC1D1-209	ENST00000446803	ZFYVE9	O95405	1425 aa		32.64	■■■□□ 2.81
TBC1D1-209	ENST00000446803	C14orf93	Q9H972	538 aa	Known RBP	32.61	■■■□□ 2.81
TBC1D1-209	ENST00000446803	ADAMTSL3	P82987	1691 aa		32.61	■■■□□ 2.81
TBC1D1-209	ENST00000446803	KIF7	Q2M1P5	1343 aa		32.61	■■■□□ 2.81
TBC1D1-209	ENST00000446803	SCAF11	Q99590	1463 aa	Known RBP	32.61	■■■□□ 2.81
TBC1D1-209	ENST00000446803	MIER1	Q8N108	512 aa		32.6	■■■□□ 2.81
TBC1D1-209	ENST00000446803	UBR1	Q8IWV7	1749 aa		32.58	■■■□□ 2.81
TBC1D1-209	ENST00000446803	SETBP1	Q9Y6X0	1596 aa		32.58	■■■□□ 2.81
TBC1D1-209	ENST00000446803	SENP3	Q9H4L4	574 aa	Predicted RBP	32.58	■■■□□ 2.81
TBC1D1-209	ENST00000446803	KDM5A	P29375	1690 aa	Known RBP	32.58	■■■□□ 2.81
TBC1D1-209	ENST00000446803	NLRP1	Q9C000	1473 aa		32.57	■■■□□ 2.8
TBC1D1-209	ENST00000446803	RIMS2	Q9UQ26	1411 aa		32.57	■■■□□ 2.8
TBC1D1-209	ENST00000446803	POLR3GL	Q9BT43	218 aa		32.54	■■■□□ 2.8
TBC1D1-209	ENST00000446803	TMEM132E	Q6IEE7	984 aa		32.52	■■■□□ 2.8
TBC1D1-209	ENST00000446803	ADGRB1	O14514	1584 aa		32.51	■■■□□ 2.79
TBC1D1-209	ENST00000446803	EIF3A	Q14152	1382 aa	Known RBP	32.51	■■■□□ 2.79
TBC1D1-209	ENST00000446803	TESK2	Q96S53	571 aa		32.5	■■■□□ 2.79
TBC1D1-209	ENST00000446803	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
TBC1D1-209	ENST00000446803	MYO3A	Q8NEV4	1616 aa		32.46	■■■□□ 2.79
TBC1D1-209	ENST00000446803	HDGF	P51858	240 aa	Known RBP	32.45	■■■□□ 2.79
TBC1D1-209	ENST00000446803	TMEM2	Q9UHN6	1383 aa		32.45	■■■□□ 2.79
TBC1D1-209	ENST00000446803	TRAK1	Q9UPV9	953 aa		32.43	■■■□□ 2.78
TBC1D1-209	ENST00000446803	ALK	Q9UM73	1620 aa		32.43	■■■□□ 2.78
TBC1D1-209	ENST00000446803	TMF1	P82094	1093 aa		32.41	■■■□□ 2.78
TBC1D1-209	ENST00000446803	DISP3	Q9P2K9	1392 aa		32.41	■■■□□ 2.78
TBC1D1-209	ENST00000446803	ASXL1	Q8IXJ9	1541 aa		32.38	■■■□□ 2.77
TBC1D1-209	ENST00000446803	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.34	■■■□□ 2.77
TBC1D1-209	ENST00000446803	NRXN3	Q9Y4C0	1643 aa		32.34	■■■□□ 2.77
TBC1D1-209	ENST00000446803	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.34	■■■□□ 2.77
TBC1D1-209	ENST00000446803	ANP32C	O43423	234 aa		32.34	■■■□□ 2.77
TBC1D1-209	ENST00000446803	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.33	■■■□□ 2.77
TBC1D1-209	ENST00000446803	STK26	Q9P289	416 aa		32.33	■■■□□ 2.77
TBC1D1-209	ENST00000446803	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.33	■■■□□ 2.77
TBC1D1-209	ENST00000446803	BCAN	Q96GW7	911 aa		32.32	■■■□□ 2.77
TBC1D1-209	ENST00000446803	SETD1A	O15047	1707 aa	Known RBP	32.32	■■■□□ 2.76
TBC1D1-209	ENST00000446803	SETD1B	Q9UPS6	1966 aa	Known RBP	32.32	■■■□□ 2.76
TBC1D1-209	ENST00000446803	LTK	P29376	864 aa		32.31	■■■□□ 2.76
TBC1D1-209	ENST00000446803	TXNDC2	Q86VQ3	553 aa		32.31	■■■□□ 2.76
TBC1D1-209	ENST00000446803	PTPRM	P28827	1452 aa		32.31	■■■□□ 2.76
TBC1D1-209	ENST00000446803	SLIT1	O75093	1534 aa		32.31	■■■□□ 2.76
TBC1D1-209	ENST00000446803	QRICH2	Q9H0J4	1663 aa		32.3	■■■□□ 2.76
TBC1D1-209	ENST00000446803	EID1	Q9Y6B2	187 aa		32.3	■■■□□ 2.76
TBC1D1-209	ENST00000446803	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.29	■■■□□ 2.76
TBC1D1-209	ENST00000446803	ARHGAP23	Q9P227	1491 aa		32.29	■■■□□ 2.76
TBC1D1-209	ENST00000446803	SLC24A1	O60721	1099 aa		32.28	■■■□□ 2.76
TBC1D1-209	ENST00000446803	CDCA8	Q53HL2	280 aa		32.25	■■■□□ 2.75
TBC1D1-209	ENST00000446803	ZNF142	P52746	1687 aa	Predicted RBP	32.25	■■■□□ 2.75
TBC1D1-209	ENST00000446803	SBNO2	Q9Y2G9	1366 aa		32.25	■■■□□ 2.75
TBC1D1-209	ENST00000446803	PLEKHG1	Q9ULL1	1385 aa		32.24	■■■□□ 2.75
TBC1D1-209	ENST00000446803	MET	P08581	1390 aa		32.2	■■■□□ 2.75
TBC1D1-209	ENST00000446803	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.19	■■■□□ 2.74
TBC1D1-209	ENST00000446803	LRPPRC	P42704	1394 aa	Known RBP	32.18	■■■□□ 2.74
TBC1D1-209	ENST00000446803	ADAMTS13	Q76LX8	1427 aa		32.17	■■■□□ 2.74
TBC1D1-209	ENST00000446803	PRAM1	Q96QH2	718 aa		32.16	■■■□□ 2.74
TBC1D1-209	ENST00000446803	POGK	Q9P215	609 aa		32.16	■■■□□ 2.74
TBC1D1-209	ENST00000446803	SLC26A8	Q96RN1	970 aa		32.12	■■■□□ 2.73
TBC1D1-209	ENST00000446803	ABCC11	Q96J66	1382 aa		32.12	■■■□□ 2.73
TBC1D1-209	ENST00000446803	DLC1	Q96QB1	1528 aa		32.12	■■■□□ 2.73
TBC1D1-209	ENST00000446803	MYOM1	P52179	1685 aa		32.1	■■■□□ 2.73
TBC1D1-209	ENST00000446803	PANK3	Q9H999	370 aa		32.1	■■■□□ 2.73
TBC1D1-209	ENST00000446803	MED14	O60244	1454 aa		32.09	■■■□□ 2.73
TBC1D1-209	ENST00000446803	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.08	■■■□□ 2.73
TBC1D1-209	ENST00000446803	EVC2	Q86UK5	1308 aa		32.08	■■■□□ 2.73
TBC1D1-209	ENST00000446803	CNGB1	Q14028	1251 aa	Predicted RBP	32.08	■■■□□ 2.73
TBC1D1-209	ENST00000446803	ANKLE2	Q86XL3	938 aa		32.08	■■■□□ 2.73
TBC1D1-209	ENST00000446803	KNDC1	Q76NI1	1749 aa		32.07	■■■□□ 2.73
TBC1D1-209	ENST00000446803	WAPL	Q7Z5K2	1190 aa		32.07	■■■□□ 2.72
TBC1D1-209	ENST00000446803	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.06	■■■□□ 2.72
TBC1D1-209	ENST00000446803	TULP4	Q9NRJ4	1543 aa		32.06	■■■□□ 2.72
TBC1D1-209	ENST00000446803	CCER2	I3L3R5	266 aa		32.06	■■■□□ 2.72
TBC1D1-209	ENST00000446803	TBX22	Q9Y458	520 aa		32.04	■■■□□ 2.72
TBC1D1-209	ENST00000446803	PLEKHH1	Q9ULM0	1364 aa		32.03	■■■□□ 2.72
TBC1D1-209	ENST00000446803	DIP2A	Q14689	1571 aa		32.03	■■■□□ 2.72
TBC1D1-209	ENST00000446803	TECPR2	O15040	1411 aa		32.02	■■■□□ 2.72
TBC1D1-209	ENST00000446803	PER1	O15534	1290 aa	Predicted RBP	32.01	■■■□□ 2.72
TBC1D1-209	ENST00000446803	KDM4F	A0A1W2PPD8	638 aa		32.01	■■■□□ 2.71
TBC1D1-209	ENST00000446803	CPS1	P31327	1500 aa		32	■■■□□ 2.71
TBC1D1-209	ENST00000446803	YTHDC1	Q96MU7	727 aa	Known RBP	32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms