RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 UBR1Q8IWV7 1749 aa10.87□□□□□ -0.67
SF3A3P1-201ENST00000446317 RIMS2Q9UQ26 1411 aa10.87□□□□□ -0.67
SF3A3P1-201ENST00000446317 LTKP29376 864 aa10.87□□□□□ -0.67
SF3A3P1-201ENST00000446317 NLRP1Q9C000 1473 aa10.86□□□□□ -0.67
SF3A3P1-201ENST00000446317 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
SF3A3P1-201ENST00000446317 PIAS4Q8N2W9 510 aaPredicted RBP10.86□□□□□ -0.67
SF3A3P1-201ENST00000446317 CLSPNQ9HAW4 1339 aa10.85□□□□□ -0.67
SF3A3P1-201ENST00000446317 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
SF3A3P1-201ENST00000446317 LMTK3Q96Q04 1460 aa10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 THEMISQ8N1K5 641 aaPredicted RBP10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
SF3A3P1-201ENST00000446317 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
SF3A3P1-201ENST00000446317 TMEM132EQ6IEE7 984 aa10.82□□□□□ -0.68
SF3A3P1-201ENST00000446317 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
SF3A3P1-201ENST00000446317 ZNF142P52746 1687 aaPredicted RBP10.81□□□□□ -0.68
SF3A3P1-201ENST00000446317 STK26Q9P289 416 aa10.81□□□□□ -0.68
SF3A3P1-201ENST00000446317 ZFYVE9O95405 1425 aa10.8□□□□□ -0.68
SF3A3P1-201ENST00000446317 PPLO60437 1756 aa10.8□□□□□ -0.68
SF3A3P1-201ENST00000446317 IFT172Q9UG01 1749 aa10.8□□□□□ -0.68
SF3A3P1-201ENST00000446317 PRAG1Q86YV5 1406 aa10.79□□□□□ -0.68
SF3A3P1-201ENST00000446317 ANKLE2Q86XL3 938 aa10.79□□□□□ -0.68
SF3A3P1-201ENST00000446317 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
SF3A3P1-201ENST00000446317 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
SF3A3P1-201ENST00000446317 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
SF3A3P1-201ENST00000446317 IQGAP1P46940 1657 aa10.78□□□□□ -0.68
SF3A3P1-201ENST00000446317 RPGRIP1LQ68CZ1 1315 aa10.77□□□□□ -0.69
SF3A3P1-201ENST00000446317 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.69
SF3A3P1-201ENST00000446317 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.77□□□□□ -0.69
SF3A3P1-201ENST00000446317 ARHGAP23Q9P227 1491 aa10.77□□□□□ -0.69
SF3A3P1-201ENST00000446317 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A3P1-201ENST00000446317 SLIT1O75093 1534 aa10.76□□□□□ -0.69
SF3A3P1-201ENST00000446317 MYOM2P54296 1465 aa10.76□□□□□ -0.69
SF3A3P1-201ENST00000446317 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
SF3A3P1-201ENST00000446317 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
SF3A3P1-201ENST00000446317 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
SF3A3P1-201ENST00000446317 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
SF3A3P1-201ENST00000446317 METP08581 1390 aa10.75□□□□□ -0.69
SF3A3P1-201ENST00000446317 NEURL4Q96JN8 1562 aa10.75□□□□□ -0.69
SF3A3P1-201ENST00000446317 CARD11Q9BXL7 1154 aa10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 TRPM1Q7Z4N2 1603 aa10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 HDGFP51858 240 aaKnown RBP10.74□□□□□ -0.69
SF3A3P1-201ENST00000446317 ASXL1Q8IXJ9 1541 aa10.73□□□□□ -0.69
SF3A3P1-201ENST00000446317 KDM5AP29375 1690 aaKnown RBP10.73□□□□□ -0.69
SF3A3P1-201ENST00000446317 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
SF3A3P1-201ENST00000446317 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
SF3A3P1-201ENST00000446317 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
SF3A3P1-201ENST00000446317 NRXN1Q9ULB1 1477 aa10.72□□□□□ -0.69
SF3A3P1-201ENST00000446317 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
SF3A3P1-201ENST00000446317 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
SF3A3P1-201ENST00000446317 STRCQ7RTU9 1775 aa10.72□□□□□ -0.69
SF3A3P1-201ENST00000446317 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
SF3A3P1-201ENST00000446317 PTPRUQ92729 1446 aa10.71□□□□□ -0.69
SF3A3P1-201ENST00000446317 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
SF3A3P1-201ENST00000446317 WAPLQ7Z5K2 1190 aa10.71□□□□□ -0.69
SF3A3P1-201ENST00000446317 POLR3GLQ9BT43 218 aa10.71□□□□□ -0.69
SF3A3P1-201ENST00000446317 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
SF3A3P1-201ENST00000446317 ZNF335Q9H4Z2 1342 aaPredicted RBP10.7□□□□□ -0.7
SF3A3P1-201ENST00000446317 MYT1Q01538 1121 aa10.69□□□□□ -0.7
SF3A3P1-201ENST00000446317 PELP1Q8IZL8 1130 aaKnown RBP10.69□□□□□ -0.7
SF3A3P1-201ENST00000446317 AMOTL2Q9Y2J4 779 aa10.69□□□□□ -0.7
SF3A3P1-201ENST00000446317 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
SF3A3P1-201ENST00000446317 SETBP1Q9Y6X0 1596 aa10.69□□□□□ -0.7
SF3A3P1-201ENST00000446317 KCNA6P17658 529 aa10.68□□□□□ -0.7
SF3A3P1-201ENST00000446317 SETD1AO15047 1707 aaKnown RBP10.68□□□□□ -0.7
SF3A3P1-201ENST00000446317 ADGRB1O14514 1584 aa10.68□□□□□ -0.7
SF3A3P1-201ENST00000446317 USP47Q96K76 1375 aa10.68□□□□□ -0.7
SF3A3P1-201ENST00000446317 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
SF3A3P1-201ENST00000446317 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
SF3A3P1-201ENST00000446317 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
SF3A3P1-201ENST00000446317 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
SF3A3P1-201ENST00000446317 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
SF3A3P1-201ENST00000446317 POGKQ9P215 609 aa10.67□□□□□ -0.7
SF3A3P1-201ENST00000446317 ROBO2Q9HCK4 1378 aa10.66□□□□□ -0.7
SF3A3P1-201ENST00000446317 TBX22Q9Y458 520 aa10.66□□□□□ -0.7
SF3A3P1-201ENST00000446317 MED14O60244 1454 aa10.66□□□□□ -0.7
SF3A3P1-201ENST00000446317 C14orf37Q86TY3 774 aa10.65□□□□□ -0.7
SF3A3P1-201ENST00000446317 LAMC1P11047 1609 aa10.64□□□□□ -0.71
SF3A3P1-201ENST00000446317 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
SF3A3P1-201ENST00000446317 LRPPRCP42704 1394 aaKnown RBP10.64□□□□□ -0.71
SF3A3P1-201ENST00000446317 PROSER2Q86WR7 435 aaPredicted RBP10.63□□□□□ -0.71
SF3A3P1-201ENST00000446317 STAC3Q96MF2 364 aa10.63□□□□□ -0.71
SF3A3P1-201ENST00000446317 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
SF3A3P1-201ENST00000446317 KIAA1210Q9ULL0 1709 aa10.63□□□□□ -0.71
SF3A3P1-201ENST00000446317 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
SF3A3P1-201ENST00000446317 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
SF3A3P1-201ENST00000446317 GPRASP1Q5JY77 1395 aa10.62□□□□□ -0.71
SF3A3P1-201ENST00000446317 DIP2AQ14689 1571 aa10.62□□□□□ -0.71
SF3A3P1-201ENST00000446317 CNGB1Q14028 1251 aaPredicted RBP10.61□□□□□ -0.71
SF3A3P1-201ENST00000446317 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
SF3A3P1-201ENST00000446317 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
SF3A3P1-201ENST00000446317 DISP3Q9P2K9 1392 aa10.6□□□□□ -0.71
SF3A3P1-201ENST00000446317 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
SF3A3P1-201ENST00000446317 XRN1Q8IZH2 1706 aaKnown RBP10.59□□□□□ -0.71
SF3A3P1-201ENST00000446317 DMRT2Q9Y5R5 561 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 338.9 ms