RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
HMGB1P48-201ENST00000446155 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
HMGB1P48-201ENST00000446155 PLEKHG3A1L390 1219 aa9.55□□□□□ -0.88
HMGB1P48-201ENST00000446155 SSTR3P32745 418 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P48-201ENST00000446155 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
HMGB1P48-201ENST00000446155 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
HMGB1P48-201ENST00000446155 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
HMGB1P48-201ENST00000446155 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
HMGB1P48-201ENST00000446155 CD46P15529 392 aa9.52□□□□□ -0.89
HMGB1P48-201ENST00000446155 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
HMGB1P48-201ENST00000446155 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
HMGB1P48-201ENST00000446155 SLC10A3P09131 477 aa9.5□□□□□ -0.89
HMGB1P48-201ENST00000446155 SULF1Q8IWU6 871 aa9.5□□□□□ -0.89
HMGB1P48-201ENST00000446155 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
HMGB1P48-201ENST00000446155 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
HMGB1P48-201ENST00000446155 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
HMGB1P48-201ENST00000446155 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
HMGB1P48-201ENST00000446155 PCDH10Q9P2E7 1040 aa9.46□□□□□ -0.9
HMGB1P48-201ENST00000446155 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
HMGB1P48-201ENST00000446155 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
HMGB1P48-201ENST00000446155 LRCH3Q96II8 777 aa9.45□□□□□ -0.9
HMGB1P48-201ENST00000446155 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
HMGB1P48-201ENST00000446155 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P48-201ENST00000446155 GCGRP47871 477 aa9.43□□□□□ -0.9
HMGB1P48-201ENST00000446155 WNT2BQ93097 391 aa9.43□□□□□ -0.9
HMGB1P48-201ENST00000446155 STAC3Q96MF2 364 aa9.43□□□□□ -0.9
HMGB1P48-201ENST00000446155 GOPCQ9HD26 462 aa9.43□□□□□ -0.9
HMGB1P48-201ENST00000446155 BCAMP50895 628 aa9.42□□□□□ -0.9
HMGB1P48-201ENST00000446155 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
HMGB1P48-201ENST00000446155 RDH13Q8NBN7 331 aa9.42□□□□□ -0.9
HMGB1P48-201ENST00000446155 GOLGA8CPA6NN73 597 aa9.41□□□□□ -0.9
HMGB1P48-201ENST00000446155 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
HMGB1P48-201ENST00000446155 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
HMGB1P48-201ENST00000446155 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
HMGB1P48-201ENST00000446155 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.9
HMGB1P48-201ENST00000446155 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
HMGB1P48-201ENST00000446155 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
HMGB1P48-201ENST00000446155 CFHP08603 1231 aa9.39□□□□□ -0.91
HMGB1P48-201ENST00000446155 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
HMGB1P48-201ENST00000446155 DIXDC1Q155Q3 683 aa9.38□□□□□ -0.91
HMGB1P48-201ENST00000446155 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
HMGB1P48-201ENST00000446155 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
HMGB1P48-201ENST00000446155 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
HMGB1P48-201ENST00000446155 RNF40O75150 1001 aa9.37□□□□□ -0.91
HMGB1P48-201ENST00000446155 KDM4AO75164 1064 aa9.37□□□□□ -0.91
HMGB1P48-201ENST00000446155 USP46P62068 366 aa9.37□□□□□ -0.91
HMGB1P48-201ENST00000446155 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
HMGB1P48-201ENST00000446155 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
HMGB1P48-201ENST00000446155 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
HMGB1P48-201ENST00000446155 MYT1LQ9UL68 1186 aa9.36□□□□□ -0.91
HMGB1P48-201ENST00000446155 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 SPTLC1O15269 473 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 HOXA2O43364 376 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 GJA5P36382 358 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 APLP1P51693 650 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
HMGB1P48-201ENST00000446155 PPP4CP60510 307 aa9.34□□□□□ -0.91
HMGB1P48-201ENST00000446155 TUSC1Q2TAM9 212 aa9.34□□□□□ -0.91
HMGB1P48-201ENST00000446155 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
HMGB1P48-201ENST00000446155 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P48-201ENST00000446155 LIMD1Q9UGP4 676 aa9.34□□□□□ -0.91
HMGB1P48-201ENST00000446155 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
HMGB1P48-201ENST00000446155 FUT2Q10981 343 aa9.33□□□□□ -0.92
HMGB1P48-201ENST00000446155 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGB1P48-201ENST00000446155 NDUFV2P19404 249 aa9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 HLA-CQ95604 372 aa9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 PRR14Q9BWN1 585 aa9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
HMGB1P48-201ENST00000446155 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
HMGB1P48-201ENST00000446155 MORN1Q5T089 497 aa9.3□□□□□ -0.92
HMGB1P48-201ENST00000446155 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P48-201ENST00000446155 PCDHGC3Q9UN70 934 aa9.3□□□□□ -0.92
HMGB1P48-201ENST00000446155 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
HMGB1P48-201ENST00000446155 NYAP1Q6ZVC0 841 aa9.29□□□□□ -0.92
HMGB1P48-201ENST00000446155 FDX1P10109 184 aa9.28□□□□□ -0.92
HMGB1P48-201ENST00000446155 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
HMGB1P48-201ENST00000446155 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
HMGB1P48-201ENST00000446155 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
HMGB1P48-201ENST00000446155 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
HMGB1P48-201ENST00000446155 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P48-201ENST00000446155 LILRB3O75022 631 aa9.26□□□□□ -0.93
HMGB1P48-201ENST00000446155 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
HMGB1P48-201ENST00000446155 PTPN5P54829 565 aa9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 QPCTQ16769 361 aa9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 PCDHB3Q9Y5E6 796 aa9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 GTF3C3Q9Y5Q9 886 aa9.25□□□□□ -0.93
HMGB1P48-201ENST00000446155 BLOC1S3Q6QNY0 202 aa9.24□□□□□ -0.93
HMGB1P48-201ENST00000446155 MMRN1Q13201 1228 aa9.23□□□□□ -0.93
HMGB1P48-201ENST00000446155 THAP11Q96EK4 314 aa9.23□□□□□ -0.93
HMGB1P48-201ENST00000446155 HRCP23327 699 aa9.22□□□□□ -0.93
HMGB1P48-201ENST00000446155 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
HMGB1P48-201ENST00000446155 SALL2Q9Y467 1007 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P48-201ENST00000446155 RTL5Q5HYW3 569 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P48-201ENST00000446155 TJAP1Q5JTD0 557 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms