RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
VPS52-212ENST00000445902 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
VPS52-212ENST00000445902 HSP90AA1P07900 732 aaKnown RBP17.87■□□□□ 0.45
VPS52-212ENST00000445902 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
VPS52-212ENST00000445902 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
VPS52-212ENST00000445902 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
VPS52-212ENST00000445902 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
VPS52-212ENST00000445902 UPF2Q9HAU5 1272 aaKnown RBP17.85■□□□□ 0.45
VPS52-212ENST00000445902 A2MP01023 1474 aa17.85■□□□□ 0.45
VPS52-212ENST00000445902 EIF4G3O43432 1585 aaKnown RBP17.84■□□□□ 0.45
VPS52-212ENST00000445902 CLCN1P35523 988 aa17.84■□□□□ 0.45
VPS52-212ENST00000445902 PRDM15P57071 1507 aaPredicted RBP17.84■□□□□ 0.45
VPS52-212ENST00000445902 MCM4P33991 863 aa17.84■□□□□ 0.45
VPS52-212ENST00000445902 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.45
VPS52-212ENST00000445902 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.44
VPS52-212ENST00000445902 FSD2A1L4K1 749 aa17.83■□□□□ 0.44
VPS52-212ENST00000445902 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
VPS52-212ENST00000445902 TBC1D32Q96NH3 1257 aa17.82■□□□□ 0.44
VPS52-212ENST00000445902 GPRASP1Q5JY77 1395 aa17.82■□□□□ 0.44
VPS52-212ENST00000445902 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
VPS52-212ENST00000445902 CGNL1Q0VF96 1302 aa17.82■□□□□ 0.44
VPS52-212ENST00000445902 MYO5CQ9NQX4 1742 aa17.81■□□□□ 0.44
VPS52-212ENST00000445902 ADCY10Q96PN6 1610 aa17.81■□□□□ 0.44
VPS52-212ENST00000445902 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
VPS52-212ENST00000445902 TRAK2O60296 914 aa17.8■□□□□ 0.44
VPS52-212ENST00000445902 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
VPS52-212ENST00000445902 PTPRGP23470 1445 aa17.8■□□□□ 0.44
VPS52-212ENST00000445902 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
VPS52-212ENST00000445902 WDR7Q9Y4E6 1490 aa17.79■□□□□ 0.44
VPS52-212ENST00000445902 E9PSI1 815 aa17.79■□□□□ 0.44
VPS52-212ENST00000445902 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
VPS52-212ENST00000445902 PCDHB15Q9Y5E8 787 aa17.79■□□□□ 0.44
VPS52-212ENST00000445902 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
VPS52-212ENST00000445902 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
VPS52-212ENST00000445902 RRP9O43818 475 aaKnown RBP17.77■□□□□ 0.44
VPS52-212ENST00000445902 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
VPS52-212ENST00000445902 PLA2R1Q13018 1463 aa17.77■□□□□ 0.43
VPS52-212ENST00000445902 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
VPS52-212ENST00000445902 SHANK2Q9UPX8 1470 aa17.76■□□□□ 0.43
VPS52-212ENST00000445902 PLEKHD1A6NEE1 506 aa17.76■□□□□ 0.43
VPS52-212ENST00000445902 RLBP1P12271 317 aa17.76■□□□□ 0.43
VPS52-212ENST00000445902 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
VPS52-212ENST00000445902 CLASP1Q7Z460 1538 aa17.75■□□□□ 0.43
VPS52-212ENST00000445902 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
VPS52-212ENST00000445902 GRPEL1Q9HAV7 217 aa17.74■□□□□ 0.43
VPS52-212ENST00000445902 ESPNB1AK53 854 aa17.74■□□□□ 0.43
VPS52-212ENST00000445902 MRE11P49959 708 aa17.74■□□□□ 0.43
VPS52-212ENST00000445902 LAMC1P11047 1609 aa17.73■□□□□ 0.43
VPS52-212ENST00000445902 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
VPS52-212ENST00000445902 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
VPS52-212ENST00000445902 ASXL1Q8IXJ9 1541 aa17.71■□□□□ 0.43
VPS52-212ENST00000445902 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
VPS52-212ENST00000445902 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
VPS52-212ENST00000445902 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
VPS52-212ENST00000445902 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
VPS52-212ENST00000445902 TRIM44Q96DX7 344 aaPredicted RBP17.7■□□□□ 0.42
VPS52-212ENST00000445902 EIF2AK4Q9P2K8 1649 aaKnown RBP17.69■□□□□ 0.42
VPS52-212ENST00000445902 FBLN2P98095 1184 aa17.68■□□□□ 0.42
VPS52-212ENST00000445902 ABCC2Q92887 1545 aa17.68■□□□□ 0.42
VPS52-212ENST00000445902 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
VPS52-212ENST00000445902 RARSP54136 660 aaKnown RBP17.67■□□□□ 0.42
VPS52-212ENST00000445902 GAS2L3Q86XJ1 694 aa17.67■□□□□ 0.42
VPS52-212ENST00000445902 CCDC141Q6ZP82 1450 aa17.67■□□□□ 0.42
VPS52-212ENST00000445902 MAGI1Q96QZ7 1491 aaPredicted RBP17.66■□□□□ 0.42
VPS52-212ENST00000445902 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
VPS52-212ENST00000445902 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
VPS52-212ENST00000445902 NINLQ9Y2I6 1382 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 SYNMO15061 1565 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
VPS52-212ENST00000445902 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
VPS52-212ENST00000445902 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
VPS52-212ENST00000445902 MYOM1P52179 1685 aa17.62■□□□□ 0.41
VPS52-212ENST00000445902 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
VPS52-212ENST00000445902 ZNF692Q9BU19 519 aaPredicted RBP17.61■□□□□ 0.41
VPS52-212ENST00000445902 TNPO1Q92973 898 aaKnown RBP17.61■□□□□ 0.41
VPS52-212ENST00000445902 NUP160Q12769 1436 aa17.6■□□□□ 0.41
VPS52-212ENST00000445902 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
VPS52-212ENST00000445902 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
VPS52-212ENST00000445902 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
VPS52-212ENST00000445902 ATP10BO94823 1461 aa17.59■□□□□ 0.41
VPS52-212ENST00000445902 KIAA1211Q6ZU35 1233 aa17.59■□□□□ 0.41
VPS52-212ENST00000445902 IQGAP1P46940 1657 aa17.59■□□□□ 0.41
VPS52-212ENST00000445902 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
VPS52-212ENST00000445902 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
VPS52-212ENST00000445902 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
VPS52-212ENST00000445902 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.4
VPS52-212ENST00000445902 RBM10P98175 930 aaKnown RBP17.57■□□□□ 0.4
VPS52-212ENST00000445902 UNC13BO14795 1591 aa17.56■□□□□ 0.4
VPS52-212ENST00000445902 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
VPS52-212ENST00000445902 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
VPS52-212ENST00000445902 CDC42BPBQ9Y5S2 1711 aa17.56■□□□□ 0.4
VPS52-212ENST00000445902 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
VPS52-212ENST00000445902 ABCA8O94911 1581 aa17.56■□□□□ 0.4
VPS52-212ENST00000445902 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
VPS52-212ENST00000445902 MADDQ8WXG6 1647 aa17.55■□□□□ 0.4
VPS52-212ENST00000445902 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
VPS52-212ENST00000445902 TPM2P07951 284 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms