RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 CROCC2H7BZ55 1655 aa22.04■■□□□ 1.12
SHANK2-209ENST00000445654 RBM33Q96EV2 1170 aaKnown RBP22.03■■□□□ 1.12
SHANK2-209ENST00000445654 RRP7BPQ9NSQ0 103 aa22.02■■□□□ 1.12
SHANK2-209ENST00000445654 NOS1P29475 1434 aa22■■□□□ 1.11
SHANK2-209ENST00000445654 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
SHANK2-209ENST00000445654 CDK12Q9NYV4 1490 aaPredicted RBP22■■□□□ 1.11
SHANK2-209ENST00000445654 SHPRHQ149N8 1683 aa22■■□□□ 1.11
SHANK2-209ENST00000445654 PLEKHG1Q9ULL1 1385 aa21.99■■□□□ 1.11
SHANK2-209ENST00000445654 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
SHANK2-209ENST00000445654 RXRBP28702 533 aa21.99■■□□□ 1.11
SHANK2-209ENST00000445654 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
SHANK2-209ENST00000445654 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
SHANK2-209ENST00000445654 LRP6O75581 1613 aa21.98■■□□□ 1.11
SHANK2-209ENST00000445654 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-209ENST00000445654 C14orf37Q86TY3 774 aa21.97■■□□□ 1.11
SHANK2-209ENST00000445654 ABCC5O15440 1437 aa21.97■■□□□ 1.11
SHANK2-209ENST00000445654 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
SHANK2-209ENST00000445654 ANKRD30AQ9BXX3 1397 aa21.96■■□□□ 1.11
SHANK2-209ENST00000445654 RPRD2Q5VT52 1461 aaKnown RBP21.95■■□□□ 1.1
SHANK2-209ENST00000445654 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
SHANK2-209ENST00000445654 ATF3P18847 181 aa21.93■■□□□ 1.1
SHANK2-209ENST00000445654 DAPK1P53355 1430 aa21.93■■□□□ 1.1
SHANK2-209ENST00000445654 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHANK2-209ENST00000445654 PTPN23Q9H3S7 1636 aa21.92■■□□□ 1.1
SHANK2-209ENST00000445654 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
SHANK2-209ENST00000445654 C19orf44Q9H6X5 657 aa21.92■■□□□ 1.1
SHANK2-209ENST00000445654 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
SHANK2-209ENST00000445654 RIMS2Q9UQ26 1411 aa21.9■■□□□ 1.1
SHANK2-209ENST00000445654 DIP2AQ14689 1571 aa21.9■■□□□ 1.1
SHANK2-209ENST00000445654 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
SHANK2-209ENST00000445654 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.09
SHANK2-209ENST00000445654 FOXD1Q16676 465 aa21.88■■□□□ 1.09
SHANK2-209ENST00000445654 GCC2Q8IWJ2 1684 aa21.85■■□□□ 1.09
SHANK2-209ENST00000445654 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
SHANK2-209ENST00000445654 AFF2P51816 1311 aa21.83■■□□□ 1.09
SHANK2-209ENST00000445654 MYO5BQ9ULV0 1848 aa21.83■■□□□ 1.09
SHANK2-209ENST00000445654 DCCP43146 1447 aa21.83■■□□□ 1.09
SHANK2-209ENST00000445654 NUTM2BA6NNL0 878 aaPredicted RBP21.82■■□□□ 1.08
SHANK2-209ENST00000445654 NUTM2EB1AL46 878 aaPredicted RBP21.82■■□□□ 1.08
SHANK2-209ENST00000445654 NUTM2AQ8IVF1 878 aaPredicted RBP21.82■■□□□ 1.08
SHANK2-209ENST00000445654 BRINP3Q76B58 766 aa21.81■■□□□ 1.08
SHANK2-209ENST00000445654 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
SHANK2-209ENST00000445654 SETD5Q9C0A6 1442 aa21.8■■□□□ 1.08
SHANK2-209ENST00000445654 TRPM2O94759 1503 aa21.8■■□□□ 1.08
SHANK2-209ENST00000445654 RBM6P78332 1123 aaKnown RBP21.8■■□□□ 1.08
SHANK2-209ENST00000445654 APLP2Q06481 763 aa21.8■■□□□ 1.08
SHANK2-209ENST00000445654 LRRC59Q96AG4 307 aaKnown RBP21.79■■□□□ 1.08
SHANK2-209ENST00000445654 ADGRL2O95490 1459 aa21.78■■□□□ 1.08
SHANK2-209ENST00000445654 ADAMTS13Q76LX8 1427 aa21.78■■□□□ 1.08
SHANK2-209ENST00000445654 ASXL1Q8IXJ9 1541 aa21.76■■□□□ 1.07
SHANK2-209ENST00000445654 CHGAP10645 457 aaKnown RBP21.76■■□□□ 1.07
SHANK2-209ENST00000445654 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
SHANK2-209ENST00000445654 RGS12O14924 1447 aa21.75■■□□□ 1.07
SHANK2-209ENST00000445654 QTRT2Q9H974 415 aaKnown RBP21.75■■□□□ 1.07
SHANK2-209ENST00000445654 ANKRD50Q9ULJ7 1429 aa21.74■■□□□ 1.07
SHANK2-209ENST00000445654 NHSL1Q5SYE7 1610 aa21.74■■□□□ 1.07
SHANK2-209ENST00000445654 NUTM2DQ5VT03 806 aaPredicted RBP21.74■■□□□ 1.07
SHANK2-209ENST00000445654 AMOTL2Q9Y2J4 779 aa21.74■■□□□ 1.07
SHANK2-209ENST00000445654 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
SHANK2-209ENST00000445654 C8orf37Q96NL8 207 aa21.71■■□□□ 1.07
SHANK2-209ENST00000445654 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
SHANK2-209ENST00000445654 MST1RQ04912 1400 aa21.69■■□□□ 1.06
SHANK2-209ENST00000445654 UNC13BO14795 1591 aa21.67■■□□□ 1.06
SHANK2-209ENST00000445654 PNPLA6Q8IY17 1366 aa21.67■■□□□ 1.06
SHANK2-209ENST00000445654 PTPRUQ92729 1446 aa21.65■■□□□ 1.06
SHANK2-209ENST00000445654 XRN1Q8IZH2 1706 aaKnown RBP21.65■■□□□ 1.06
SHANK2-209ENST00000445654 CCDC125Q86Z20 511 aa21.63■■□□□ 1.05
SHANK2-209ENST00000445654 E9PCH4 1651 aa21.63■■□□□ 1.05
SHANK2-209ENST00000445654 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
SHANK2-209ENST00000445654 TRPC5Q9UL62 973 aaPredicted RBP21.61■■□□□ 1.05
SHANK2-209ENST00000445654 ADGRL3Q9HAR2 1447 aa21.61■■□□□ 1.05
SHANK2-209ENST00000445654 USP21Q9UK80 565 aa21.59■■□□□ 1.05
SHANK2-209ENST00000445654 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.05
SHANK2-209ENST00000445654 PTCH1Q13635 1447 aa21.58■■□□□ 1.05
SHANK2-209ENST00000445654 ADAMTS2O95450 1211 aa21.58■■□□□ 1.05
SHANK2-209ENST00000445654 SRCAPQ6ZRS2 3230 aa21.58■■□□□ 1.04
SHANK2-209ENST00000445654 FAM50AQ14320 339 aaKnown RBP21.57■■□□□ 1.04
SHANK2-209ENST00000445654 LAMC1P11047 1609 aa21.56■■□□□ 1.04
SHANK2-209ENST00000445654 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
SHANK2-209ENST00000445654 FNBP4Q8N3X1 1017 aaPredicted RBP21.54■■□□□ 1.04
SHANK2-209ENST00000445654 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
SHANK2-209ENST00000445654 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.04
SHANK2-209ENST00000445654 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
SHANK2-209ENST00000445654 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
SHANK2-209ENST00000445654 DDX17Q92841 729 aaKnown RBP21.51■■□□□ 1.03
SHANK2-209ENST00000445654 ATRNO75882 1429 aa21.51■■□□□ 1.03
SHANK2-209ENST00000445654 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
SHANK2-209ENST00000445654 METP08581 1390 aa21.49■■□□□ 1.03
SHANK2-209ENST00000445654 ROCK1Q13464 1354 aa21.49■■□□□ 1.03
SHANK2-209ENST00000445654 NUP155O75694 1391 aa21.48■■□□□ 1.03
SHANK2-209ENST00000445654 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
SHANK2-209ENST00000445654 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
SHANK2-209ENST00000445654 NPHP3Q7Z494 1330 aa21.41■■□□□ 1.02
SHANK2-209ENST00000445654 EP400Q96L91 3159 aa21.4■■□□□ 1.02
SHANK2-209ENST00000445654 BLMP54132 1417 aaPredicted RBP21.4■■□□□ 1.02
SHANK2-209ENST00000445654 GJD4Q96KN9 370 aaPredicted RBP21.4■■□□□ 1.02
SHANK2-209ENST00000445654 ORAI2Q96SN7 254 aa21.4■■□□□ 1.02
SHANK2-209ENST00000445654 MARF1Q9Y4F3 1742 aaKnown RBP21.4■■□□□ 1.02
SHANK2-209ENST00000445654 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.02
SHANK2-209ENST00000445654 MYOM2P54296 1465 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms