RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
NPHP1-207ENST00000445609 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
NPHP1-207ENST00000445609 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
NPHP1-207ENST00000445609 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
NPHP1-207ENST00000445609 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
NPHP1-207ENST00000445609 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
NPHP1-207ENST00000445609 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
NPHP1-207ENST00000445609 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
NPHP1-207ENST00000445609 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
NPHP1-207ENST00000445609 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
NPHP1-207ENST00000445609 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
NPHP1-207ENST00000445609 PPLO60437 1756 aa13.49□□□□□ -0.25
NPHP1-207ENST00000445609 NBPF1Q3BBV0 1214 aa13.48□□□□□ -0.25
NPHP1-207ENST00000445609 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
NPHP1-207ENST00000445609 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
NPHP1-207ENST00000445609 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
NPHP1-207ENST00000445609 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
NPHP1-207ENST00000445609 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
NPHP1-207ENST00000445609 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPHP1-207ENST00000445609 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
NPHP1-207ENST00000445609 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
NPHP1-207ENST00000445609 EID1Q9Y6B2 187 aa13.46□□□□□ -0.25
NPHP1-207ENST00000445609 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
NPHP1-207ENST00000445609 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.26
NPHP1-207ENST00000445609 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.26
NPHP1-207ENST00000445609 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
NPHP1-207ENST00000445609 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
NPHP1-207ENST00000445609 SLIT1O75093 1534 aa13.44□□□□□ -0.26
NPHP1-207ENST00000445609 LTKP29376 864 aa13.44□□□□□ -0.26
NPHP1-207ENST00000445609 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
NPHP1-207ENST00000445609 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
NPHP1-207ENST00000445609 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
NPHP1-207ENST00000445609 USP47Q96K76 1375 aa13.42□□□□□ -0.26
NPHP1-207ENST00000445609 ZNF142P52746 1687 aaPredicted RBP13.42□□□□□ -0.26
NPHP1-207ENST00000445609 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
NPHP1-207ENST00000445609 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
NPHP1-207ENST00000445609 BCANQ96GW7 911 aa13.41□□□□□ -0.26
NPHP1-207ENST00000445609 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
NPHP1-207ENST00000445609 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
NPHP1-207ENST00000445609 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
NPHP1-207ENST00000445609 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
NPHP1-207ENST00000445609 LAMC1P11047 1609 aa13.39□□□□□ -0.27
NPHP1-207ENST00000445609 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
NPHP1-207ENST00000445609 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
NPHP1-207ENST00000445609 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
NPHP1-207ENST00000445609 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
NPHP1-207ENST00000445609 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
NPHP1-207ENST00000445609 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
NPHP1-207ENST00000445609 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
NPHP1-207ENST00000445609 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
NPHP1-207ENST00000445609 SLC26A8Q96RN1 970 aa13.35□□□□□ -0.27
NPHP1-207ENST00000445609 STK26Q9P289 416 aa13.34□□□□□ -0.27
NPHP1-207ENST00000445609 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
NPHP1-207ENST00000445609 METP08581 1390 aa13.34□□□□□ -0.27
NPHP1-207ENST00000445609 YTHDC2Q9H6S0 1430 aaKnown RBP13.33□□□□□ -0.28
NPHP1-207ENST00000445609 MED14O60244 1454 aa13.33□□□□□ -0.28
NPHP1-207ENST00000445609 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
NPHP1-207ENST00000445609 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.28
NPHP1-207ENST00000445609 HSPA2P54652 639 aa13.33□□□□□ -0.28
NPHP1-207ENST00000445609 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
NPHP1-207ENST00000445609 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
NPHP1-207ENST00000445609 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
NPHP1-207ENST00000445609 TESK2Q96S53 571 aa13.32□□□□□ -0.28
NPHP1-207ENST00000445609 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
NPHP1-207ENST00000445609 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
NPHP1-207ENST00000445609 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
NPHP1-207ENST00000445609 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
NPHP1-207ENST00000445609 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
NPHP1-207ENST00000445609 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
NPHP1-207ENST00000445609 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
NPHP1-207ENST00000445609 WASHC2AQ641Q2 1341 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 TMF1P82094 1093 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 POGKQ9P215 609 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 PIK3R4Q99570 1358 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
NPHP1-207ENST00000445609 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.29
NPHP1-207ENST00000445609 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
NPHP1-207ENST00000445609 CCDC7Q96M83 1385 aa13.26□□□□□ -0.29
NPHP1-207ENST00000445609 SBNO2Q9Y2G9 1366 aa13.26□□□□□ -0.29
NPHP1-207ENST00000445609 DLC1Q96QB1 1528 aa13.26□□□□□ -0.29
NPHP1-207ENST00000445609 TECPR2O15040 1411 aa13.26□□□□□ -0.29
NPHP1-207ENST00000445609 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
NPHP1-207ENST00000445609 SAFB2Q14151 953 aaKnown RBP eCLIP13.25□□□□□ -0.29
NPHP1-207ENST00000445609 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
NPHP1-207ENST00000445609 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
NPHP1-207ENST00000445609 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
NPHP1-207ENST00000445609 FAM135BQ49AJ0 1406 aa13.24□□□□□ -0.29
NPHP1-207ENST00000445609 DISP3Q9P2K9 1392 aa13.24□□□□□ -0.29
NPHP1-207ENST00000445609 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
NPHP1-207ENST00000445609 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
NPHP1-207ENST00000445609 ARHGEF28Q8N1W1 1705 aaKnown RBP13.23□□□□□ -0.29
NPHP1-207ENST00000445609 DIEXFQ68CQ4 756 aaKnown RBP13.23□□□□□ -0.29
NPHP1-207ENST00000445609 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
NPHP1-207ENST00000445609 KCNA6P17658 529 aa13.22□□□□□ -0.29
NPHP1-207ENST00000445609 PLEKHH1Q9ULM0 1364 aa13.22□□□□□ -0.29
NPHP1-207ENST00000445609 CPS1P31327 1500 aa13.21□□□□□ -0.29
NPHP1-207ENST00000445609 EVC2Q86UK5 1308 aa13.21□□□□□ -0.29
NPHP1-207ENST00000445609 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
NPHP1-207ENST00000445609 PTCH1Q13635 1447 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms