RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.09
CALD1-211ENST00000445569 KIF7Q2M1P5 1343 aa14.51□□□□□ -0.09
CALD1-211ENST00000445569 NRXN1Q9ULB1 1477 aa14.5□□□□□ -0.09
CALD1-211ENST00000445569 EIF3AQ14152 1382 aaKnown RBP14.5□□□□□ -0.09
CALD1-211ENST00000445569 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
CALD1-211ENST00000445569 SCAF11Q99590 1463 aaKnown RBP14.48□□□□□ -0.09
CALD1-211ENST00000445569 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
CALD1-211ENST00000445569 RPGRIP1LQ68CZ1 1315 aa14.46□□□□□ -0.09
CALD1-211ENST00000445569 ERVK-7P63135 1459 aa14.46□□□□□ -0.09
CALD1-211ENST00000445569 MYO3AQ8NEV4 1616 aa14.45□□□□□ -0.1
CALD1-211ENST00000445569 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
CALD1-211ENST00000445569 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
CALD1-211ENST00000445569 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
CALD1-211ENST00000445569 CFAP65Q6ZU64 1925 aaKnown RBP14.44□□□□□ -0.1
CALD1-211ENST00000445569 NEXMIFQ5QGS0 1516 aa14.44□□□□□ -0.1
CALD1-211ENST00000445569 PIK3C2GO75747 1445 aa14.42□□□□□ -0.1
CALD1-211ENST00000445569 TMEM131LA2VDJ0 1609 aa14.42□□□□□ -0.1
CALD1-211ENST00000445569 ST20-MTHFSA0A0A6YYL1 179 aa14.42□□□□□ -0.1
CALD1-211ENST00000445569 CEBPAP49715 358 aaPredicted RBP14.42□□□□□ -0.1
CALD1-211ENST00000445569 SLC52A1Q9NWF4 448 aa14.42□□□□□ -0.1
CALD1-211ENST00000445569 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
CALD1-211ENST00000445569 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
CALD1-211ENST00000445569 KTN1Q86UP2 1357 aaKnown RBP14.4□□□□□ -0.1
CALD1-211ENST00000445569 C11orf95C9JLR9 678 aaPredicted RBP14.4□□□□□ -0.1
CALD1-211ENST00000445569 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
CALD1-211ENST00000445569 ZFYVE9O95405 1425 aa14.4□□□□□ -0.1
CALD1-211ENST00000445569 NBPF1Q3BBV0 1214 aa14.39□□□□□ -0.11
CALD1-211ENST00000445569 ESF1Q9H501 851 aaKnown RBP14.39□□□□□ -0.11
CALD1-211ENST00000445569 MYO5BQ9ULV0 1848 aa14.38□□□□□ -0.11
CALD1-211ENST00000445569 HSPA2P54652 639 aa14.38□□□□□ -0.11
CALD1-211ENST00000445569 TMF1P82094 1093 aa14.38□□□□□ -0.11
CALD1-211ENST00000445569 CDCA8Q53HL2 280 aa14.38□□□□□ -0.11
CALD1-211ENST00000445569 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
CALD1-211ENST00000445569 SBNO2Q9Y2G9 1366 aa14.36□□□□□ -0.11
CALD1-211ENST00000445569 ADGRB1O14514 1584 aa14.36□□□□□ -0.11
CALD1-211ENST00000445569 RIMS1Q86UR5 1692 aaKnown RBP14.35□□□□□ -0.11
CALD1-211ENST00000445569 QRICH2Q9H0J4 1663 aa14.35□□□□□ -0.11
CALD1-211ENST00000445569 ADGRF5Q8IZF2 1346 aa14.35□□□□□ -0.11
CALD1-211ENST00000445569 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
CALD1-211ENST00000445569 TESK2Q96S53 571 aa14.34□□□□□ -0.11
CALD1-211ENST00000445569 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
CALD1-211ENST00000445569 PRKRIP1Q9H875 184 aaPredicted RBP14.34□□□□□ -0.11
CALD1-211ENST00000445569 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CALD1-211ENST00000445569 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.12
CALD1-211ENST00000445569 MYOM1P52179 1685 aa14.33□□□□□ -0.12
CALD1-211ENST00000445569 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
CALD1-211ENST00000445569 FER1L4A9Z1Z3 1794 aa14.31□□□□□ -0.12
CALD1-211ENST00000445569 ZMYM3Q14202 1370 aa14.3□□□□□ -0.12
CALD1-211ENST00000445569 IDI1Q13907 227 aa14.29□□□□□ -0.12
CALD1-211ENST00000445569 CFAP70Q5T0N1 1121 aa14.29□□□□□ -0.12
CALD1-211ENST00000445569 C14orf93Q9H972 538 aaKnown RBP14.29□□□□□ -0.12
CALD1-211ENST00000445569 A2ML1A8K2U0 1454 aa14.29□□□□□ -0.12
CALD1-211ENST00000445569 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
CALD1-211ENST00000445569 TNRQ92752 1358 aa14.26□□□□□ -0.13
CALD1-211ENST00000445569 CENPJQ9HC77 1338 aaPredicted RBP14.26□□□□□ -0.13
CALD1-211ENST00000445569 RALBP1Q15311 655 aa14.26□□□□□ -0.13
CALD1-211ENST00000445569 STAG3Q9UJ98 1225 aa14.26□□□□□ -0.13
CALD1-211ENST00000445569 UBR1Q8IWV7 1749 aa14.25□□□□□ -0.13
CALD1-211ENST00000445569 ASXL1Q8IXJ9 1541 aa14.25□□□□□ -0.13
CALD1-211ENST00000445569 MRS2Q9HD23 443 aa14.24□□□□□ -0.13
CALD1-211ENST00000445569 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
CALD1-211ENST00000445569 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
CALD1-211ENST00000445569 C3P01024 1663 aa14.23□□□□□ -0.13
CALD1-211ENST00000445569 BRD4O60885 1362 aaPredicted RBP14.23□□□□□ -0.13
CALD1-211ENST00000445569 PARD3Q8TEW0 1356 aa14.23□□□□□ -0.13
CALD1-211ENST00000445569 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
CALD1-211ENST00000445569 MYBBP1AQ9BQG0 1328 aaKnown RBP14.23□□□□□ -0.13
CALD1-211ENST00000445569 SETD1AO15047 1707 aaKnown RBP14.23□□□□□ -0.13
CALD1-211ENST00000445569 DLC1Q96QB1 1528 aa14.22□□□□□ -0.13
CALD1-211ENST00000445569 KNDC1Q76NI1 1749 aa14.22□□□□□ -0.13
CALD1-211ENST00000445569 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
CALD1-211ENST00000445569 USP32Q8NFA0 1604 aa14.22□□□□□ -0.13
CALD1-211ENST00000445569 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.13
CALD1-211ENST00000445569 FBXO41Q8TF61 875 aa14.21□□□□□ -0.13
CALD1-211ENST00000445569 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
CALD1-211ENST00000445569 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
CALD1-211ENST00000445569 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
CALD1-211ENST00000445569 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
CALD1-211ENST00000445569 YTHDC2Q9H6S0 1430 aaKnown RBP14.18□□□□□ -0.14
CALD1-211ENST00000445569 TULP4Q9NRJ4 1543 aa14.18□□□□□ -0.14
CALD1-211ENST00000445569 NINLQ9Y2I6 1382 aa14.18□□□□□ -0.14
CALD1-211ENST00000445569 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
CALD1-211ENST00000445569 NLRP13Q86W25 1043 aa14.17□□□□□ -0.14
CALD1-211ENST00000445569 PANK3Q9H999 370 aa14.17□□□□□ -0.14
CALD1-211ENST00000445569 CERKQ8TCT0 537 aa14.16□□□□□ -0.14
CALD1-211ENST00000445569 TRAK1Q9UPV9 953 aa14.16□□□□□ -0.14
CALD1-211ENST00000445569 GTF3C3Q9Y5Q9 886 aa14.16□□□□□ -0.14
CALD1-211ENST00000445569 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
CALD1-211ENST00000445569 INSRP06213 1382 aa14.15□□□□□ -0.14
CALD1-211ENST00000445569 PER1O15534 1290 aaPredicted RBP14.15□□□□□ -0.14
CALD1-211ENST00000445569 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
CALD1-211ENST00000445569 CPS1P31327 1500 aa14.15□□□□□ -0.14
CALD1-211ENST00000445569 DIP2AQ14689 1571 aa14.14□□□□□ -0.15
CALD1-211ENST00000445569 TMEM2Q9UHN6 1383 aa14.14□□□□□ -0.15
CALD1-211ENST00000445569 HNRNPUQ00839 825 aaKnown RBP eCLIP14.14□□□□□ -0.15
CALD1-211ENST00000445569 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
CALD1-211ENST00000445569 SLIT1O75093 1534 aa14.14□□□□□ -0.15
CALD1-211ENST00000445569 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
CALD1-211ENST00000445569 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
CALD1-211ENST00000445569 ZNF142P52746 1687 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms