RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
SEC13-213ENST00000445064 ROCK1Q13464 1354 aa23.68■■□□□ 1.38
SEC13-213ENST00000445064 UNC13BO14795 1591 aa23.67■■□□□ 1.38
SEC13-213ENST00000445064 HDGFP51858 240 aaKnown RBP23.67■■□□□ 1.38
SEC13-213ENST00000445064 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
SEC13-213ENST00000445064 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
SEC13-213ENST00000445064 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
SEC13-213ENST00000445064 MYO5BQ9ULV0 1848 aa23.66■■□□□ 1.38
SEC13-213ENST00000445064 ZFYVE9O95405 1425 aa23.65■■□□□ 1.38
SEC13-213ENST00000445064 RIMS2Q9UQ26 1411 aa23.65■■□□□ 1.38
SEC13-213ENST00000445064 TMEM131LA2VDJ0 1609 aa23.63■■□□□ 1.37
SEC13-213ENST00000445064 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
SEC13-213ENST00000445064 E9PCH4 1651 aa23.63■■□□□ 1.37
SEC13-213ENST00000445064 NUP155O75694 1391 aa23.63■■□□□ 1.37
SEC13-213ENST00000445064 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
SEC13-213ENST00000445064 FAM135BQ49AJ0 1406 aa23.61■■□□□ 1.37
SEC13-213ENST00000445064 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
SEC13-213ENST00000445064 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
SEC13-213ENST00000445064 TBX22Q9Y458 520 aa23.58■■□□□ 1.37
SEC13-213ENST00000445064 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
SEC13-213ENST00000445064 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
SEC13-213ENST00000445064 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
SEC13-213ENST00000445064 MSH6P52701 1360 aa23.54■■□□□ 1.36
SEC13-213ENST00000445064 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
SEC13-213ENST00000445064 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
SEC13-213ENST00000445064 ADAMTS13Q76LX8 1427 aa23.5■■□□□ 1.35
SEC13-213ENST00000445064 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
SEC13-213ENST00000445064 C14orf37Q86TY3 774 aa23.48■■□□□ 1.35
SEC13-213ENST00000445064 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
SEC13-213ENST00000445064 AMOTL2Q9Y2J4 779 aa23.44■■□□□ 1.34
SEC13-213ENST00000445064 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
SEC13-213ENST00000445064 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
SEC13-213ENST00000445064 DIP2AQ14689 1571 aa23.42■■□□□ 1.34
SEC13-213ENST00000445064 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
SEC13-213ENST00000445064 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
SEC13-213ENST00000445064 SPHKAPQ2M3C7 1700 aa23.41■■□□□ 1.34
SEC13-213ENST00000445064 PTPRUQ92729 1446 aa23.41■■□□□ 1.34
SEC13-213ENST00000445064 ATF3P18847 181 aa23.39■■□□□ 1.33
SEC13-213ENST00000445064 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
SEC13-213ENST00000445064 PHLPP1O60346 1717 aa23.39■■□□□ 1.33
SEC13-213ENST00000445064 TRPM2O94759 1503 aa23.38■■□□□ 1.33
SEC13-213ENST00000445064 NAIPQ13075 1403 aa23.38■■□□□ 1.33
SEC13-213ENST00000445064 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.37■■□□□ 1.33
SEC13-213ENST00000445064 POTEAQ6S8J7 498 aa23.36■■□□□ 1.33
SEC13-213ENST00000445064 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
SEC13-213ENST00000445064 JCADQ9P266 1359 aa23.34■■□□□ 1.33
SEC13-213ENST00000445064 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
SEC13-213ENST00000445064 METP08581 1390 aa23.32■■□□□ 1.32
SEC13-213ENST00000445064 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
SEC13-213ENST00000445064 SETBP1Q9Y6X0 1596 aa23.31■■□□□ 1.32
SEC13-213ENST00000445064 COL16A1Q07092 1604 aaPredicted RBP23.3■■□□□ 1.32
SEC13-213ENST00000445064 BRINP3Q76B58 766 aa23.28■■□□□ 1.32
SEC13-213ENST00000445064 NEXMIFQ5QGS0 1516 aa23.28■■□□□ 1.32
SEC13-213ENST00000445064 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
SEC13-213ENST00000445064 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
SEC13-213ENST00000445064 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
SEC13-213ENST00000445064 KIF1BO60333 1816 aa23.25■■□□□ 1.31
SEC13-213ENST00000445064 VGFO15240 615 aaPredicted RBP23.23■■□□□ 1.31
SEC13-213ENST00000445064 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
SEC13-213ENST00000445064 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
SEC13-213ENST00000445064 DCCP43146 1447 aa23.22■■□□□ 1.31
SEC13-213ENST00000445064 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
SEC13-213ENST00000445064 LRP6O75581 1613 aa23.2■■□□□ 1.3
SEC13-213ENST00000445064 FOXD1Q16676 465 aa23.2■■□□□ 1.3
SEC13-213ENST00000445064 MST1RQ04912 1400 aa23.19■■□□□ 1.3
SEC13-213ENST00000445064 RPGRIP1LQ68CZ1 1315 aa23.17■■□□□ 1.3
SEC13-213ENST00000445064 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
SEC13-213ENST00000445064 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
SEC13-213ENST00000445064 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
SEC13-213ENST00000445064 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
SEC13-213ENST00000445064 DDX17Q92841 729 aaKnown RBP23.16■■□□□ 1.3
SEC13-213ENST00000445064 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
SEC13-213ENST00000445064 SHPRHQ149N8 1683 aa23.15■■□□□ 1.3
SEC13-213ENST00000445064 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
SEC13-213ENST00000445064 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
SEC13-213ENST00000445064 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
SEC13-213ENST00000445064 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
SEC13-213ENST00000445064 SETD5Q9C0A6 1442 aa23.11■■□□□ 1.29
SEC13-213ENST00000445064 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
SEC13-213ENST00000445064 SETD1AO15047 1707 aaKnown RBP23.1■■□□□ 1.29
SEC13-213ENST00000445064 NHSL1Q5SYE7 1610 aa23.09■■□□□ 1.29
SEC13-213ENST00000445064 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
SEC13-213ENST00000445064 ORAI2Q96SN7 254 aa23.08■■□□□ 1.29
SEC13-213ENST00000445064 PPLO60437 1756 aa23.08■■□□□ 1.29
SEC13-213ENST00000445064 C1orf167Q5SNV9 1468 aa23.07■■□□□ 1.28
SEC13-213ENST00000445064 PTCH1Q13635 1447 aa23.07■■□□□ 1.28
SEC13-213ENST00000445064 ADGRF5Q8IZF2 1346 aa23.07■■□□□ 1.28
SEC13-213ENST00000445064 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
SEC13-213ENST00000445064 RXRBP28702 533 aa23.03■■□□□ 1.28
SEC13-213ENST00000445064 AFF2P51816 1311 aa23.03■■□□□ 1.28
SEC13-213ENST00000445064 PNPLA6Q8IY17 1366 aa23.02■■□□□ 1.28
SEC13-213ENST00000445064 STK26Q9P289 416 aa23.02■■□□□ 1.28
SEC13-213ENST00000445064 PRAG1Q86YV5 1406 aa23■■□□□ 1.27
SEC13-213ENST00000445064 C8orf37Q96NL8 207 aa23■■□□□ 1.27
SEC13-213ENST00000445064 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
SEC13-213ENST00000445064 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
SEC13-213ENST00000445064 WAPLQ7Z5K2 1190 aa22.98■■□□□ 1.27
SEC13-213ENST00000445064 SOS2Q07890 1332 aaPredicted RBP22.98■■□□□ 1.27
SEC13-213ENST00000445064 ADAMTS2O95450 1211 aa22.97■■□□□ 1.27
SEC13-213ENST00000445064 ANKRD30BQ9BXX2 1392 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 344 ms