RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FAM217BQ9NTX9 383 aaPredicted RBP9.88□□□□□ -0.83
HMGB3P6-201ENST00000444896 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
HMGB3P6-201ENST00000444896 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
HMGB3P6-201ENST00000444896 GOLGA8CPA6NN73 597 aa9.87□□□□□ -0.83
HMGB3P6-201ENST00000444896 HRO43593 1189 aa9.87□□□□□ -0.83
HMGB3P6-201ENST00000444896 NBPF3Q9H094 633 aa9.87□□□□□ -0.83
HMGB3P6-201ENST00000444896 TMEM134Q9H6X4 195 aa9.87□□□□□ -0.83
HMGB3P6-201ENST00000444896 FAM98CQ17RN3 349 aaKnown RBP9.84□□□□□ -0.83
HMGB3P6-201ENST00000444896 LAPTM4BQ86VI4 370 aa9.83□□□□□ -0.84
HMGB3P6-201ENST00000444896 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
HMGB3P6-201ENST00000444896 DDRGK1Q96HY6 314 aa9.83□□□□□ -0.84
HMGB3P6-201ENST00000444896 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
HMGB3P6-201ENST00000444896 CD46P15529 392 aa9.8□□□□□ -0.84
HMGB3P6-201ENST00000444896 ZFRQ96KR1 1074 aaKnown RBP9.8□□□□□ -0.84
HMGB3P6-201ENST00000444896 BEGAINQ9BUH8 593 aa9.8□□□□□ -0.84
HMGB3P6-201ENST00000444896 DDX11L8A8MPP1 907 aa9.79□□□□□ -0.84
HMGB3P6-201ENST00000444896 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
HMGB3P6-201ENST00000444896 PLSCR2Q9NRY7 297 aa9.79□□□□□ -0.84
HMGB3P6-201ENST00000444896 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
HMGB3P6-201ENST00000444896 SLC10A3P09131 477 aa9.78□□□□□ -0.84
HMGB3P6-201ENST00000444896 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.85
HMGB3P6-201ENST00000444896 SPNS2Q8IVW8 549 aa9.77□□□□□ -0.85
HMGB3P6-201ENST00000444896 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
HMGB3P6-201ENST00000444896 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
HMGB3P6-201ENST00000444896 ANKK1Q8NFD2 765 aa9.73□□□□□ -0.85
HMGB3P6-201ENST00000444896 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P6-201ENST00000444896 GCGRP47871 477 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 WNT2BQ93097 391 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 KCTD12Q96CX2 325 aaKnown RBP9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 GOPCQ9HD26 462 aa9.72□□□□□ -0.85
HMGB3P6-201ENST00000444896 RNF40O75150 1001 aa9.71□□□□□ -0.86
HMGB3P6-201ENST00000444896 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.86
HMGB3P6-201ENST00000444896 SLF2Q8IX21 1173 aa9.71□□□□□ -0.86
HMGB3P6-201ENST00000444896 GTF3C3Q9Y5Q9 886 aa9.71□□□□□ -0.86
HMGB3P6-201ENST00000444896 MYSM1Q5VVJ2 828 aa9.7□□□□□ -0.86
HMGB3P6-201ENST00000444896 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
HMGB3P6-201ENST00000444896 SOWAHBA6NEL2 793 aa9.69□□□□□ -0.86
HMGB3P6-201ENST00000444896 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
HMGB3P6-201ENST00000444896 LRCH3Q96II8 777 aa9.69□□□□□ -0.86
HMGB3P6-201ENST00000444896 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
HMGB3P6-201ENST00000444896 BCAMP50895 628 aa9.68□□□□□ -0.86
HMGB3P6-201ENST00000444896 MMRN1Q13201 1228 aa9.68□□□□□ -0.86
HMGB3P6-201ENST00000444896 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
HMGB3P6-201ENST00000444896 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
HMGB3P6-201ENST00000444896 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P6-201ENST00000444896 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
HMGB3P6-201ENST00000444896 KDM4AO75164 1064 aa9.66□□□□□ -0.86
HMGB3P6-201ENST00000444896 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
HMGB3P6-201ENST00000444896 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
HMGB3P6-201ENST00000444896 CFHP08603 1231 aa9.65□□□□□ -0.86
HMGB3P6-201ENST00000444896 NDUFV2P19404 249 aa9.65□□□□□ -0.86
HMGB3P6-201ENST00000444896 PTPN5P54829 565 aa9.65□□□□□ -0.86
HMGB3P6-201ENST00000444896 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
HMGB3P6-201ENST00000444896 RIC3Q7Z5B4 369 aa9.64□□□□□ -0.87
HMGB3P6-201ENST00000444896 PCMTD1Q96MG8 357 aaPredicted RBP9.64□□□□□ -0.87
HMGB3P6-201ENST00000444896 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
HMGB3P6-201ENST00000444896 SPTLC1O15269 473 aa9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 FBXO31Q5XUX0 539 aaPredicted RBP9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 TSR3Q9UJK0 312 aaKnown RBP9.63□□□□□ -0.87
HMGB3P6-201ENST00000444896 HOXA2O43364 376 aa9.62□□□□□ -0.87
HMGB3P6-201ENST00000444896 PPP4CP60510 307 aa9.62□□□□□ -0.87
HMGB3P6-201ENST00000444896 USP46P62068 366 aa9.62□□□□□ -0.87
HMGB3P6-201ENST00000444896 THSD4Q6ZMP0 1018 aa9.62□□□□□ -0.87
HMGB3P6-201ENST00000444896 HLA-CQ95604 372 aa9.62□□□□□ -0.87
HMGB3P6-201ENST00000444896 FUT2Q10981 343 aa9.61□□□□□ -0.87
HMGB3P6-201ENST00000444896 NECTIN2Q92692 538 aa9.61□□□□□ -0.87
HMGB3P6-201ENST00000444896 HCSTQ9UBK5 93 aa9.61□□□□□ -0.87
HMGB3P6-201ENST00000444896 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
HMGB3P6-201ENST00000444896 ACTN4O43707 911 aaKnown RBP9.6□□□□□ -0.87
HMGB3P6-201ENST00000444896 APLP1P51693 650 aa9.6□□□□□ -0.87
HMGB3P6-201ENST00000444896 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
HMGB3P6-201ENST00000444896 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
HMGB3P6-201ENST00000444896 GJA5P36382 358 aa9.59□□□□□ -0.87
HMGB3P6-201ENST00000444896 GUCA2AQ02747 115 aa9.59□□□□□ -0.87
HMGB3P6-201ENST00000444896 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
HMGB3P6-201ENST00000444896 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
HMGB3P6-201ENST00000444896 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
HMGB3P6-201ENST00000444896 PUS10Q3MIT2 529 aaKnown RBP9.57□□□□□ -0.88
HMGB3P6-201ENST00000444896 FDX1P10109 184 aa9.56□□□□□ -0.88
HMGB3P6-201ENST00000444896 QPCTQ16769 361 aa9.56□□□□□ -0.88
HMGB3P6-201ENST00000444896 MORN1Q5T089 497 aa9.56□□□□□ -0.88
HMGB3P6-201ENST00000444896 LILRB3O75022 631 aa9.55□□□□□ -0.88
HMGB3P6-201ENST00000444896 CSPP1Q1MSJ5 1256 aa9.55□□□□□ -0.88
HMGB3P6-201ENST00000444896 PPP2R2DQ66LE6 453 aa9.55□□□□□ -0.88
HMGB3P6-201ENST00000444896 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
HMGB3P6-201ENST00000444896 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
HMGB3P6-201ENST00000444896 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
HMGB3P6-201ENST00000444896 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P6-201ENST00000444896 HRCP23327 699 aa9.53□□□□□ -0.88
HMGB3P6-201ENST00000444896 RTL5Q5HYW3 569 aaPredicted RBP9.53□□□□□ -0.88
HMGB3P6-201ENST00000444896 SLC27A5Q9Y2P5 690 aa9.53□□□□□ -0.88
HMGB3P6-201ENST00000444896 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
HMGB3P6-201ENST00000444896 RFC5P40937 340 aa9.51□□□□□ -0.89
HMGB3P6-201ENST00000444896 NYAP1Q6ZVC0 841 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms