RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
SHC1-208ENST00000444179 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
SHC1-208ENST00000444179 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
SHC1-208ENST00000444179 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
SHC1-208ENST00000444179 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
SHC1-208ENST00000444179 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
SHC1-208ENST00000444179 PLEKHG1Q9ULL1 1385 aa16.64■□□□□ 0.26
SHC1-208ENST00000444179 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
SHC1-208ENST00000444179 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
SHC1-208ENST00000444179 PROSER2Q86WR7 435 aaPredicted RBP16.63■□□□□ 0.25
SHC1-208ENST00000444179 BCANQ96GW7 911 aa16.63■□□□□ 0.25
SHC1-208ENST00000444179 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
SHC1-208ENST00000444179 SOCS7O14512 581 aa16.61■□□□□ 0.25
SHC1-208ENST00000444179 NAIPQ13075 1403 aa16.61■□□□□ 0.25
SHC1-208ENST00000444179 NWD1Q149M9 1564 aa16.6■□□□□ 0.25
SHC1-208ENST00000444179 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
SHC1-208ENST00000444179 ADAMTS13Q76LX8 1427 aa16.6■□□□□ 0.25
SHC1-208ENST00000444179 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
SHC1-208ENST00000444179 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
SHC1-208ENST00000444179 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
SHC1-208ENST00000444179 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHC1-208ENST00000444179 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.24
SHC1-208ENST00000444179 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
SHC1-208ENST00000444179 CHD2O14647 1828 aaKnown RBP16.53■□□□□ 0.24
SHC1-208ENST00000444179 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
SHC1-208ENST00000444179 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
SHC1-208ENST00000444179 SLAIN2Q9P270 581 aa16.51■□□□□ 0.23
SHC1-208ENST00000444179 MSH6P52701 1360 aa16.51■□□□□ 0.23
SHC1-208ENST00000444179 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
SHC1-208ENST00000444179 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
SHC1-208ENST00000444179 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
SHC1-208ENST00000444179 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
SHC1-208ENST00000444179 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SHC1-208ENST00000444179 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
SHC1-208ENST00000444179 DIP2AQ14689 1571 aa16.48■□□□□ 0.23
SHC1-208ENST00000444179 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
SHC1-208ENST00000444179 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
SHC1-208ENST00000444179 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
SHC1-208ENST00000444179 TRPM2O94759 1503 aa16.48■□□□□ 0.23
SHC1-208ENST00000444179 METP08581 1390 aa16.47■□□□□ 0.23
SHC1-208ENST00000444179 NCOA3Q9Y6Q9 1424 aa16.46■□□□□ 0.23
SHC1-208ENST00000444179 SETBP1Q9Y6X0 1596 aa16.46■□□□□ 0.23
SHC1-208ENST00000444179 NEXMIFQ5QGS0 1516 aa16.45■□□□□ 0.22
SHC1-208ENST00000444179 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
SHC1-208ENST00000444179 FOXD1Q16676 465 aa16.44■□□□□ 0.22
SHC1-208ENST00000444179 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
SHC1-208ENST00000444179 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
SHC1-208ENST00000444179 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
SHC1-208ENST00000444179 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
SHC1-208ENST00000444179 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
SHC1-208ENST00000444179 CADPS2Q86UW7 1296 aa16.4■□□□□ 0.22
SHC1-208ENST00000444179 ATF3P18847 181 aa16.39■□□□□ 0.21
SHC1-208ENST00000444179 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
SHC1-208ENST00000444179 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
SHC1-208ENST00000444179 MPHOSPH9Q99550 1183 aa16.36■□□□□ 0.21
SHC1-208ENST00000444179 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
SHC1-208ENST00000444179 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
SHC1-208ENST00000444179 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
SHC1-208ENST00000444179 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
SHC1-208ENST00000444179 JCADQ9P266 1359 aa16.35■□□□□ 0.21
SHC1-208ENST00000444179 MST1RQ04912 1400 aa16.34■□□□□ 0.21
SHC1-208ENST00000444179 KIF1BO60333 1816 aa16.33■□□□□ 0.21
SHC1-208ENST00000444179 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
SHC1-208ENST00000444179 DCCP43146 1447 aa16.33■□□□□ 0.2
SHC1-208ENST00000444179 AHDC1Q5TGY3 1603 aaPredicted RBP16.32■□□□□ 0.2
SHC1-208ENST00000444179 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
SHC1-208ENST00000444179 SPATA31E1Q6ZUB1 1445 aa16.31■□□□□ 0.2
SHC1-208ENST00000444179 ADGRL3Q9HAR2 1447 aa16.31■□□□□ 0.2
SHC1-208ENST00000444179 ADGRF5Q8IZF2 1346 aa16.31■□□□□ 0.2
SHC1-208ENST00000444179 LRP6O75581 1613 aa16.3■□□□□ 0.2
SHC1-208ENST00000444179 ASXL1Q8IXJ9 1541 aa16.29■□□□□ 0.2
SHC1-208ENST00000444179 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
SHC1-208ENST00000444179 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
SHC1-208ENST00000444179 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
SHC1-208ENST00000444179 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
SHC1-208ENST00000444179 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
SHC1-208ENST00000444179 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
SHC1-208ENST00000444179 PPLO60437 1756 aa16.27■□□□□ 0.2
SHC1-208ENST00000444179 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.19
SHC1-208ENST00000444179 SPATA31A6Q5VVP1 1343 aa16.26■□□□□ 0.19
SHC1-208ENST00000444179 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
SHC1-208ENST00000444179 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
SHC1-208ENST00000444179 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
SHC1-208ENST00000444179 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
SHC1-208ENST00000444179 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
SHC1-208ENST00000444179 NHSL1Q5SYE7 1610 aa16.22■□□□□ 0.19
SHC1-208ENST00000444179 ANKRD30BQ9BXX2 1392 aa16.22■□□□□ 0.19
SHC1-208ENST00000444179 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
SHC1-208ENST00000444179 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
SHC1-208ENST00000444179 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
SHC1-208ENST00000444179 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
SHC1-208ENST00000444179 STK26Q9P289 416 aa16.21■□□□□ 0.19
SHC1-208ENST00000444179 PIK3C2GO75747 1445 aa16.2■□□□□ 0.18
SHC1-208ENST00000444179 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
SHC1-208ENST00000444179 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
SHC1-208ENST00000444179 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
SHC1-208ENST00000444179 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
SHC1-208ENST00000444179 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
SHC1-208ENST00000444179 TECPR2O15040 1411 aa16.19■□□□□ 0.18
SHC1-208ENST00000444179 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms