RNA–Protein interactions for RNA: ENST00000443677.6

RNF135-204, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 1,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-204ENST00000443677 SLC26A8Q96RN1 970 aa29.41■■■□□ 2.3
RNF135-204ENST00000443677 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
RNF135-204ENST00000443677 E9PCH4 1651 aa29.4■■■□□ 2.3
RNF135-204ENST00000443677 ALKQ9UM73 1620 aa29.38■■■□□ 2.29
RNF135-204ENST00000443677 KCNA6P17658 529 aa29.37■■■□□ 2.29
RNF135-204ENST00000443677 SLC4A1APQ9BWU0 796 aaKnown RBP29.37■■■□□ 2.29
RNF135-204ENST00000443677 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
RNF135-204ENST00000443677 ILDR2Q71H61 639 aa29.35■■■□□ 2.29
RNF135-204ENST00000443677 TMEM131LA2VDJ0 1609 aa29.34■■■□□ 2.29
RNF135-204ENST00000443677 MYO5BQ9ULV0 1848 aa29.34■■■□□ 2.29
RNF135-204ENST00000443677 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
RNF135-204ENST00000443677 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
RNF135-204ENST00000443677 ZFYVE9O95405 1425 aa29.33■■■□□ 2.29
RNF135-204ENST00000443677 RIMS2Q9UQ26 1411 aa29.32■■■□□ 2.28
RNF135-204ENST00000443677 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.31■■■□□ 2.28
RNF135-204ENST00000443677 XIRP1Q702N8 1843 aaKnown RBP29.3■■■□□ 2.28
RNF135-204ENST00000443677 PROSER2Q86WR7 435 aaPredicted RBP29.3■■■□□ 2.28
RNF135-204ENST00000443677 SENP3Q9H4L4 574 aaPredicted RBP29.3■■■□□ 2.28
RNF135-204ENST00000443677 PLEKHG1Q9ULL1 1385 aa29.29■■■□□ 2.28
RNF135-204ENST00000443677 HRCP23327 699 aa29.29■■■□□ 2.28
RNF135-204ENST00000443677 MPHOSPH9Q99550 1183 aa29.29■■■□□ 2.28
RNF135-204ENST00000443677 TMEM94Q12767 1356 aa29.27■■■□□ 2.28
RNF135-204ENST00000443677 NUTM2DQ5VT03 806 aaPredicted RBP29.23■■■□□ 2.27
RNF135-204ENST00000443677 TBX22Q9Y458 520 aa29.23■■■□□ 2.27
RNF135-204ENST00000443677 RBM33Q96EV2 1170 aaKnown RBP29.22■■■□□ 2.27
RNF135-204ENST00000443677 SPHKAPQ2M3C7 1700 aa29.21■■■□□ 2.27
RNF135-204ENST00000443677 NKTRP30414 1462 aaKnown RBP29.21■■■□□ 2.27
RNF135-204ENST00000443677 NWD1Q149M9 1564 aa29.2■■■□□ 2.26
RNF135-204ENST00000443677 FOXD1Q16676 465 aa29.19■■■□□ 2.26
RNF135-204ENST00000443677 TRIM26Q12899 539 aaPredicted RBP29.17■■■□□ 2.26
RNF135-204ENST00000443677 CHD2O14647 1828 aaKnown RBP29.17■■■□□ 2.26
RNF135-204ENST00000443677 SOCS7O14512 581 aa29.16■■■□□ 2.26
RNF135-204ENST00000443677 TRPM2O94759 1503 aa29.15■■■□□ 2.26
RNF135-204ENST00000443677 MED1Q15648 1581 aaPredicted RBP29.15■■■□□ 2.26
RNF135-204ENST00000443677 FAM135BQ49AJ0 1406 aa29.14■■■□□ 2.26
RNF135-204ENST00000443677 MSH6P52701 1360 aa29.13■■■□□ 2.25
RNF135-204ENST00000443677 ADAMTS13Q76LX8 1427 aa29.12■■■□□ 2.25
RNF135-204ENST00000443677 ZNF326Q5BKZ1 582 aaKnown RBP29.12■■■□□ 2.25
RNF135-204ENST00000443677 PIK3R4Q99570 1358 aa29.1■■■□□ 2.25
RNF135-204ENST00000443677 DIP2AQ14689 1571 aa29.09■■■□□ 2.25
RNF135-204ENST00000443677 CLTCL1P53675 1640 aa29.09■■■□□ 2.25
RNF135-204ENST00000443677 SLAIN2Q9P270 581 aa29.06■■■□□ 2.24
RNF135-204ENST00000443677 PHF23Q9BUL5 403 aaPredicted RBP29.05■■■□□ 2.24
RNF135-204ENST00000443677 NCOA3Q9Y6Q9 1424 aa29.04■■■□□ 2.24
RNF135-204ENST00000443677 C14orf37Q86TY3 774 aa29.04■■■□□ 2.24
RNF135-204ENST00000443677 ROBO1Q9Y6N7 1651 aa29.03■■■□□ 2.24
RNF135-204ENST00000443677 AMOTL2Q9Y2J4 779 aa29.02■■■□□ 2.24
RNF135-204ENST00000443677 CCDC144AA2RUR9 1427 aa29.02■■■□□ 2.24
RNF135-204ENST00000443677 KIF1BO60333 1816 aa28.99■■■□□ 2.23
RNF135-204ENST00000443677 C19orf44Q9H6X5 657 aa28.98■■■□□ 2.23
RNF135-204ENST00000443677 SETBP1Q9Y6X0 1596 aa28.96■■■□□ 2.23
RNF135-204ENST00000443677 PTPRUQ92729 1446 aa28.95■■■□□ 2.23
RNF135-204ENST00000443677 NRXN3Q9Y4C0 1643 aa28.95■■■□□ 2.23
RNF135-204ENST00000443677 CADPS2Q86UW7 1296 aa28.95■■■□□ 2.22
RNF135-204ENST00000443677 ANKRD30BQ9BXX2 1392 aa28.94■■■□□ 2.22
RNF135-204ENST00000443677 ATF3P18847 181 aa28.94■■■□□ 2.22
RNF135-204ENST00000443677 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
RNF135-204ENST00000443677 NEXMIFQ5QGS0 1516 aa28.93■■■□□ 2.22
RNF135-204ENST00000443677 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.91■■■□□ 2.22
RNF135-204ENST00000443677 VGFO15240 615 aaPredicted RBP28.9■■■□□ 2.22
RNF135-204ENST00000443677 METP08581 1390 aa28.89■■■□□ 2.22
RNF135-204ENST00000443677 RGL3Q3MIN7 710 aa28.89■■■□□ 2.22
RNF135-204ENST00000443677 SPATA31E1Q6ZUB1 1445 aa28.88■■■□□ 2.21
RNF135-204ENST00000443677 PHLPP1O60346 1717 aa28.86■■■□□ 2.21
RNF135-204ENST00000443677 XRN1Q8IZH2 1706 aaKnown RBP28.86■■■□□ 2.21
RNF135-204ENST00000443677 JCADQ9P266 1359 aa28.8■■■□□ 2.2
RNF135-204ENST00000443677 RGS17Q9UGC6 210 aaPredicted RBP28.8■■■□□ 2.2
RNF135-204ENST00000443677 DCCP43146 1447 aa28.79■■■□□ 2.2
RNF135-204ENST00000443677 PPLO60437 1756 aa28.75■■■□□ 2.19
RNF135-204ENST00000443677 BRINP3Q76B58 766 aa28.75■■■□□ 2.19
RNF135-204ENST00000443677 COL16A1Q07092 1604 aaPredicted RBP28.75■■■□□ 2.19
RNF135-204ENST00000443677 ADGRF5Q8IZF2 1346 aa28.73■■■□□ 2.19
RNF135-204ENST00000443677 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
RNF135-204ENST00000443677 AHDC1Q5TGY3 1603 aaPredicted RBP28.72■■■□□ 2.19
RNF135-204ENST00000443677 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
RNF135-204ENST00000443677 ADGRL3Q9HAR2 1447 aa28.71■■■□□ 2.19
RNF135-204ENST00000443677 MST1RQ04912 1400 aa28.69■■■□□ 2.18
RNF135-204ENST00000443677 SETD1AO15047 1707 aaKnown RBP28.69■■■□□ 2.18
RNF135-204ENST00000443677 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
RNF135-204ENST00000443677 SPATA31A6Q5VVP1 1343 aa28.68■■■□□ 2.18
RNF135-204ENST00000443677 PTCH1Q13635 1447 aa28.67■■■□□ 2.18
RNF135-204ENST00000443677 ROBO2Q9HCK4 1378 aa28.65■■■□□ 2.18
RNF135-204ENST00000443677 ASXL1Q8IXJ9 1541 aa28.65■■■□□ 2.18
RNF135-204ENST00000443677 NALCNQ8IZF0 1738 aa28.65■■■□□ 2.18
RNF135-204ENST00000443677 POTEAQ6S8J7 498 aa28.64■■■□□ 2.18
RNF135-204ENST00000443677 DCAF11Q8TEB1 546 aa28.64■■■□□ 2.18
RNF135-204ENST00000443677 STAC3Q96MF2 364 aa28.64■■■□□ 2.18
RNF135-204ENST00000443677 MYOM2P54296 1465 aa28.61■■■□□ 2.17
RNF135-204ENST00000443677 SIN3AQ96ST3 1273 aa28.61■■■□□ 2.17
RNF135-204ENST00000443677 KDM2AQ9Y2K7 1162 aa28.61■■■□□ 2.17
RNF135-204ENST00000443677 SHPRHQ149N8 1683 aa28.61■■■□□ 2.17
RNF135-204ENST00000443677 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
RNF135-204ENST00000443677 MEX3CQ5U5Q3 659 aaKnown RBP28.6■■■□□ 2.17
RNF135-204ENST00000443677 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
RNF135-204ENST00000443677 LRRC59Q96AG4 307 aaKnown RBP28.59■■■□□ 2.17
RNF135-204ENST00000443677 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
RNF135-204ENST00000443677 C14orf93Q9H972 538 aaKnown RBP28.57■■■□□ 2.16
RNF135-204ENST00000443677 NHSL1Q5SYE7 1610 aa28.57■■■□□ 2.16
RNF135-204ENST00000443677 LRP6O75581 1613 aa28.56■■■□□ 2.16
RNF135-204ENST00000443677 NEUROD1Q13562 356 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms