RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
CDH23-207ENST00000442677 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
CDH23-207ENST00000442677 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
CDH23-207ENST00000442677 TSPYL1Q9H0U9 437 aa19.05■□□□□ 0.64
CDH23-207ENST00000442677 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
CDH23-207ENST00000442677 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 CPLX1O14810 134 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 SMC3Q9UQE7 1217 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 MPHOSPH9Q99550 1183 aa19.04■□□□□ 0.64
CDH23-207ENST00000442677 CT47A1Q5JQC4 288 aaPredicted RBP19.03■□□□□ 0.64
CDH23-207ENST00000442677 MTERF4Q7Z6M4 381 aaKnown RBP19.03■□□□□ 0.64
CDH23-207ENST00000442677 REC8O95072 547 aa19.03■□□□□ 0.64
CDH23-207ENST00000442677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDH23-207ENST00000442677 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
CDH23-207ENST00000442677 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
CDH23-207ENST00000442677 RAB3GAP2Q9H2M9 1393 aa19.03■□□□□ 0.64
CDH23-207ENST00000442677 ZKSCAN2Q63HK3 967 aa19.03■□□□□ 0.64
CDH23-207ENST00000442677 HSP90AB2PQ58FF8 381 aa19.02■□□□□ 0.64
CDH23-207ENST00000442677 CPLX2Q6PUV4 134 aaKnown RBP19.02■□□□□ 0.64
CDH23-207ENST00000442677 CHMP4CQ96CF2 233 aa19.02■□□□□ 0.64
CDH23-207ENST00000442677 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
CDH23-207ENST00000442677 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.64
CDH23-207ENST00000442677 LEKR1Q6ZMV7 388 aa19.02■□□□□ 0.64
CDH23-207ENST00000442677 NUTM2DQ5VT03 806 aaPredicted RBP19.02■□□□□ 0.63
CDH23-207ENST00000442677 NGEFQ8N5V2 710 aa19.02■□□□□ 0.63
CDH23-207ENST00000442677 AMPHP49418 695 aa19.01■□□□□ 0.63
CDH23-207ENST00000442677 RUFY2Q8WXA3 655 aa19.01■□□□□ 0.63
CDH23-207ENST00000442677 ODF2Q5BJF6 829 aa19.01■□□□□ 0.63
CDH23-207ENST00000442677 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
CDH23-207ENST00000442677 MRE11P49959 708 aa19■□□□□ 0.63
CDH23-207ENST00000442677 NFXL1Q6ZNB6 911 aa19■□□□□ 0.63
CDH23-207ENST00000442677 EIF3AQ14152 1382 aaKnown RBP19■□□□□ 0.63
CDH23-207ENST00000442677 ZFYVE27Q5T4F4 411 aa19■□□□□ 0.63
CDH23-207ENST00000442677 KDM4AO75164 1064 aa18.99■□□□□ 0.63
CDH23-207ENST00000442677 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
CDH23-207ENST00000442677 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
CDH23-207ENST00000442677 NUCB2P80303 420 aa18.99■□□□□ 0.63
CDH23-207ENST00000442677 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
CDH23-207ENST00000442677 CCDC73Q6ZRK6 1079 aa18.99■□□□□ 0.63
CDH23-207ENST00000442677 KIF15Q9NS87 1388 aa18.98■□□□□ 0.63
CDH23-207ENST00000442677 TERF2IPQ9NYB0 399 aa18.98■□□□□ 0.63
CDH23-207ENST00000442677 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
CDH23-207ENST00000442677 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 CAVIN1Q6NZI2 390 aaKnown RBP18.97■□□□□ 0.63
CDH23-207ENST00000442677 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 SPC24Q8NBT2 197 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 ERCC4Q92889 916 aaPredicted RBP18.97■□□□□ 0.63
CDH23-207ENST00000442677 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
CDH23-207ENST00000442677 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
CDH23-207ENST00000442677 EPS15P42566 896 aa18.96■□□□□ 0.63
CDH23-207ENST00000442677 C22orf23Q9BZE7 217 aa18.96■□□□□ 0.62
CDH23-207ENST00000442677 TRIM5Q9C035 493 aa18.96■□□□□ 0.62
CDH23-207ENST00000442677 SMC2O95347 1197 aa18.95■□□□□ 0.62
CDH23-207ENST00000442677 TRAK2O60296 914 aa18.95■□□□□ 0.62
CDH23-207ENST00000442677 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
CDH23-207ENST00000442677 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
CDH23-207ENST00000442677 E9PSI1 815 aa18.94■□□□□ 0.62
CDH23-207ENST00000442677 NAT10Q9H0A0 1025 aaKnown RBP18.94■□□□□ 0.62
CDH23-207ENST00000442677 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
CDH23-207ENST00000442677 PANK3Q9H999 370 aa18.93■□□□□ 0.62
CDH23-207ENST00000442677 NUP155O75694 1391 aa18.93■□□□□ 0.62
CDH23-207ENST00000442677 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
CDH23-207ENST00000442677 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
CDH23-207ENST00000442677 TRDNQ13061 729 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
CDH23-207ENST00000442677 OFD1O75665 1012 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
CDH23-207ENST00000442677 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 MPNDQ8N594 471 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 KRI1Q8N9T8 703 aaKnown RBP18.92■□□□□ 0.62
CDH23-207ENST00000442677 RNF20Q5VTR2 975 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 CTDP1Q9Y5B0 961 aaPredicted RBP18.92■□□□□ 0.62
CDH23-207ENST00000442677 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
CDH23-207ENST00000442677 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
CDH23-207ENST00000442677 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDH23-207ENST00000442677 ZBED9Q6R2W3 1325 aa18.91■□□□□ 0.62
CDH23-207ENST00000442677 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
CDH23-207ENST00000442677 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
CDH23-207ENST00000442677 ERICH4A6NGS2 130 aa18.9■□□□□ 0.62
CDH23-207ENST00000442677 TSPY26PQ9H489 355 aa18.9■□□□□ 0.62
CDH23-207ENST00000442677 CCDC43Q96MW1 224 aaKnown RBP18.9■□□□□ 0.62
CDH23-207ENST00000442677 SDF4Q9BRK5 362 aa18.9■□□□□ 0.62
CDH23-207ENST00000442677 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CDH23-207ENST00000442677 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
CDH23-207ENST00000442677 ERICH2A1L162 156 aa18.9■□□□□ 0.62
CDH23-207ENST00000442677 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
CDH23-207ENST00000442677 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.62
CDH23-207ENST00000442677 NEFHP12036 1026 aa18.88■□□□□ 0.61
CDH23-207ENST00000442677 KIAA0754O94854 1291 aa18.88■□□□□ 0.61
CDH23-207ENST00000442677 SAFBQ15424 915 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDH23-207ENST00000442677 UQCRHLA0A096LP55 91 aa18.87■□□□□ 0.61
CDH23-207ENST00000442677 UQCRHP07919 91 aa18.87■□□□□ 0.61
CDH23-207ENST00000442677 MYO6Q9UM54 1294 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms