RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
MCF2L-218ENST00000442625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.43■□□□□ 0.54
MCF2L-218ENST00000442625 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
MCF2L-218ENST00000442625 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
MCF2L-218ENST00000442625 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
MCF2L-218ENST00000442625 MYO5CQ9NQX4 1742 aa18.42■□□□□ 0.54
MCF2L-218ENST00000442625 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-218ENST00000442625 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
MCF2L-218ENST00000442625 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
MCF2L-218ENST00000442625 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
MCF2L-218ENST00000442625 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
MCF2L-218ENST00000442625 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-218ENST00000442625 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
MCF2L-218ENST00000442625 FGD1P98174 961 aa18.38■□□□□ 0.53
MCF2L-218ENST00000442625 FAM161AQ3B820 660 aa18.38■□□□□ 0.53
MCF2L-218ENST00000442625 CENPQQ7L2Z9 268 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-218ENST00000442625 LAMC1P11047 1609 aa18.37■□□□□ 0.53
MCF2L-218ENST00000442625 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-218ENST00000442625 EIF2AK4Q9P2K8 1649 aaKnown RBP18.37■□□□□ 0.53
MCF2L-218ENST00000442625 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
MCF2L-218ENST00000442625 BCAR3O75815 825 aa18.36■□□□□ 0.53
MCF2L-218ENST00000442625 INSRP06213 1382 aa18.35■□□□□ 0.53
MCF2L-218ENST00000442625 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
MCF2L-218ENST00000442625 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
MCF2L-218ENST00000442625 PLXNC1O60486 1568 aa18.34■□□□□ 0.53
MCF2L-218ENST00000442625 ERCC6L2Q5T890 1561 aa18.33■□□□□ 0.52
MCF2L-218ENST00000442625 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-218ENST00000442625 ATP10AO60312 1499 aa18.33■□□□□ 0.52
MCF2L-218ENST00000442625 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
MCF2L-218ENST00000442625 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
MCF2L-218ENST00000442625 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
MCF2L-218ENST00000442625 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
MCF2L-218ENST00000442625 IGHDP01880 384 aa18.3■□□□□ 0.52
MCF2L-218ENST00000442625 APAF1O14727 1248 aa18.3■□□□□ 0.52
MCF2L-218ENST00000442625 SEC24BO95487 1268 aa18.3■□□□□ 0.52
MCF2L-218ENST00000442625 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
MCF2L-218ENST00000442625 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
MCF2L-218ENST00000442625 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
MCF2L-218ENST00000442625 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
MCF2L-218ENST00000442625 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.51
MCF2L-218ENST00000442625 PLCH2O75038 1416 aa18.27■□□□□ 0.51
MCF2L-218ENST00000442625 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
MCF2L-218ENST00000442625 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
MCF2L-218ENST00000442625 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
MCF2L-218ENST00000442625 A0A0U1RQG5 324 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-218ENST00000442625 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-218ENST00000442625 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-218ENST00000442625 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
MCF2L-218ENST00000442625 CHD1O14646 1710 aa18.24■□□□□ 0.51
MCF2L-218ENST00000442625 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
MCF2L-218ENST00000442625 POGKQ9P215 609 aa18.24■□□□□ 0.51
MCF2L-218ENST00000442625 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
MCF2L-218ENST00000442625 TAF7LQ5H9L4 462 aa18.23■□□□□ 0.51
MCF2L-218ENST00000442625 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
MCF2L-218ENST00000442625 USP19O94966 1318 aa18.23■□□□□ 0.51
MCF2L-218ENST00000442625 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
MCF2L-218ENST00000442625 TULP1O00294 542 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-218ENST00000442625 SYNMO15061 1565 aa18.22■□□□□ 0.51
MCF2L-218ENST00000442625 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
MCF2L-218ENST00000442625 HOMEZQ8IX15 550 aa18.21■□□□□ 0.51
MCF2L-218ENST00000442625 PIK3C2GO75747 1445 aa18.21■□□□□ 0.51
MCF2L-218ENST00000442625 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.5
MCF2L-218ENST00000442625 ABCC1P33527 1531 aa18.2■□□□□ 0.5
MCF2L-218ENST00000442625 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
MCF2L-218ENST00000442625 CLTCL1P53675 1640 aa18.19■□□□□ 0.5
MCF2L-218ENST00000442625 KIF3BO15066 747 aa18.19■□□□□ 0.5
MCF2L-218ENST00000442625 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-218ENST00000442625 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
MCF2L-218ENST00000442625 TRPM2O94759 1503 aa18.19■□□□□ 0.5
MCF2L-218ENST00000442625 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
MCF2L-218ENST00000442625 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
MCF2L-218ENST00000442625 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
MCF2L-218ENST00000442625 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
MCF2L-218ENST00000442625 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
MCF2L-218ENST00000442625 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
MCF2L-218ENST00000442625 NKTRP30414 1462 aaKnown RBP18.17■□□□□ 0.5
MCF2L-218ENST00000442625 MYOM1P52179 1685 aa18.17■□□□□ 0.5
MCF2L-218ENST00000442625 AAMPQ13685 434 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 GLIPR1L2Q4G1C9 344 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 PTPRTO14522 1441 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
MCF2L-218ENST00000442625 E9PSI1 815 aa18.15■□□□□ 0.5
MCF2L-218ENST00000442625 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
MCF2L-218ENST00000442625 NPC1L1Q9UHC9 1359 aa18.13■□□□□ 0.49
MCF2L-218ENST00000442625 ZMYND15Q9H091 742 aa18.13■□□□□ 0.49
MCF2L-218ENST00000442625 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
MCF2L-218ENST00000442625 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
MCF2L-218ENST00000442625 ERVK-7P63135 1459 aa18.13■□□□□ 0.49
MCF2L-218ENST00000442625 CEP152O94986 1710 aa18.12■□□□□ 0.49
MCF2L-218ENST00000442625 CLUAP1Q96AJ1 413 aa18.12■□□□□ 0.49
MCF2L-218ENST00000442625 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
MCF2L-218ENST00000442625 KANK1Q14678 1352 aa18.11■□□□□ 0.49
MCF2L-218ENST00000442625 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
MCF2L-218ENST00000442625 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
MCF2L-218ENST00000442625 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
MCF2L-218ENST00000442625 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-218ENST00000442625 RLBP1P12271 317 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms