RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CCDC144AA2RUR9 1427 aa15.76■□□□□ 0.11
LTBR-203ENST00000441074 ARHGEF40Q8TER5 1519 aa15.76■□□□□ 0.11
LTBR-203ENST00000441074 DIP2CQ9Y2E4 1556 aa15.76■□□□□ 0.11
LTBR-203ENST00000441074 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
LTBR-203ENST00000441074 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
LTBR-203ENST00000441074 UBE2Q2Q8WVN8 375 aa15.74■□□□□ 0.11
LTBR-203ENST00000441074 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
LTBR-203ENST00000441074 UNC13BO14795 1591 aa15.74■□□□□ 0.11
LTBR-203ENST00000441074 TMC1Q8TDI8 760 aa15.73■□□□□ 0.11
LTBR-203ENST00000441074 DDRGK1Q96HY6 314 aa15.73■□□□□ 0.11
LTBR-203ENST00000441074 A2MP01023 1474 aa15.73■□□□□ 0.11
LTBR-203ENST00000441074 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
LTBR-203ENST00000441074 MLECQ14165 292 aa15.71■□□□□ 0.11
LTBR-203ENST00000441074 GSE1Q14687 1217 aa15.71■□□□□ 0.11
LTBR-203ENST00000441074 NBPF1Q3BBV0 1214 aa15.71■□□□□ 0.1
LTBR-203ENST00000441074 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
LTBR-203ENST00000441074 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
LTBR-203ENST00000441074 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
LTBR-203ENST00000441074 SIGLEC1Q9BZZ2 1709 aa15.69■□□□□ 0.1
LTBR-203ENST00000441074 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
LTBR-203ENST00000441074 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
LTBR-203ENST00000441074 E9PCH4 1651 aa15.68■□□□□ 0.1
LTBR-203ENST00000441074 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
LTBR-203ENST00000441074 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
LTBR-203ENST00000441074 KANK1Q14678 1352 aa15.67■□□□□ 0.1
LTBR-203ENST00000441074 PDE3BQ13370 1112 aa15.66■□□□□ 0.1
LTBR-203ENST00000441074 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
LTBR-203ENST00000441074 RALBP1Q15311 655 aa15.66■□□□□ 0.1
LTBR-203ENST00000441074 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
LTBR-203ENST00000441074 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
LTBR-203ENST00000441074 NFKBIBQ15653 356 aa15.65■□□□□ 0.1
LTBR-203ENST00000441074 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
LTBR-203ENST00000441074 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
LTBR-203ENST00000441074 UGGT1Q9NYU2 1555 aa15.64■□□□□ 0.09
LTBR-203ENST00000441074 ST20-MTHFSA0A0A6YYL1 179 aa15.63■□□□□ 0.09
LTBR-203ENST00000441074 MROH1Q8NDA8 1641 aa15.63■□□□□ 0.09
LTBR-203ENST00000441074 AGLP35573 1532 aa15.63■□□□□ 0.09
LTBR-203ENST00000441074 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
LTBR-203ENST00000441074 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
LTBR-203ENST00000441074 PRAG1Q86YV5 1406 aa15.59■□□□□ 0.09
LTBR-203ENST00000441074 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
LTBR-203ENST00000441074 NUTM2DQ5VT03 806 aaPredicted RBP15.59■□□□□ 0.09
LTBR-203ENST00000441074 LAMC1P11047 1609 aa15.58■□□□□ 0.09
LTBR-203ENST00000441074 TRPM1Q7Z4N2 1603 aa15.58■□□□□ 0.08
LTBR-203ENST00000441074 EIF2AK4Q9P2K8 1649 aaKnown RBP15.58■□□□□ 0.08
LTBR-203ENST00000441074 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.08
LTBR-203ENST00000441074 PRDM15P57071 1507 aaPredicted RBP15.58■□□□□ 0.08
LTBR-203ENST00000441074 PTPRTO14522 1441 aa15.58■□□□□ 0.08
LTBR-203ENST00000441074 VWDEQ8N2E2 1590 aa15.58■□□□□ 0.08
LTBR-203ENST00000441074 INSRP06213 1382 aa15.58■□□□□ 0.08
LTBR-203ENST00000441074 NPATQ14207 1427 aa15.56■□□□□ 0.08
LTBR-203ENST00000441074 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
LTBR-203ENST00000441074 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
LTBR-203ENST00000441074 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
LTBR-203ENST00000441074 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
LTBR-203ENST00000441074 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
LTBR-203ENST00000441074 CLTCL1P53675 1640 aa15.54■□□□□ 0.08
LTBR-203ENST00000441074 RNF17Q9BXT8 1623 aaKnown RBP15.54■□□□□ 0.08
LTBR-203ENST00000441074 FBXO31Q5XUX0 539 aaPredicted RBP15.54■□□□□ 0.08
LTBR-203ENST00000441074 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
LTBR-203ENST00000441074 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
LTBR-203ENST00000441074 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
LTBR-203ENST00000441074 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
LTBR-203ENST00000441074 TRPM2O94759 1503 aa15.53■□□□□ 0.08
LTBR-203ENST00000441074 CRBNQ96SW2 442 aa15.53■□□□□ 0.08
LTBR-203ENST00000441074 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
LTBR-203ENST00000441074 TET3O43151 1660 aa15.52■□□□□ 0.08
LTBR-203ENST00000441074 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.07
LTBR-203ENST00000441074 SLC4A3P48751 1232 aa15.51■□□□□ 0.07
LTBR-203ENST00000441074 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
LTBR-203ENST00000441074 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
LTBR-203ENST00000441074 CFAP65Q6ZU64 1925 aaKnown RBP15.51■□□□□ 0.07
LTBR-203ENST00000441074 CEP152O94986 1710 aa15.51■□□□□ 0.07
LTBR-203ENST00000441074 ADAMTSL3P82987 1691 aa15.51■□□□□ 0.07
LTBR-203ENST00000441074 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
LTBR-203ENST00000441074 PLIN1O60240 522 aa15.5■□□□□ 0.07
LTBR-203ENST00000441074 CEBPAP49715 358 aaPredicted RBP15.5■□□□□ 0.07
LTBR-203ENST00000441074 CDCA7LQ96GN5 454 aa15.5■□□□□ 0.07
LTBR-203ENST00000441074 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
LTBR-203ENST00000441074 FER1L4A9Z1Z3 1794 aa15.49■□□□□ 0.07
LTBR-203ENST00000441074 ABCC3O15438 1527 aa15.49■□□□□ 0.07
LTBR-203ENST00000441074 CLTCQ00610 1675 aaKnown RBP15.49■□□□□ 0.07
LTBR-203ENST00000441074 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
LTBR-203ENST00000441074 ZMYM3Q14202 1370 aa15.48■□□□□ 0.07
LTBR-203ENST00000441074 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
LTBR-203ENST00000441074 IDI1Q13907 227 aa15.48■□□□□ 0.07
LTBR-203ENST00000441074 CENPQQ7L2Z9 268 aaPredicted RBP15.48■□□□□ 0.07
LTBR-203ENST00000441074 BLMP54132 1417 aaPredicted RBP15.47■□□□□ 0.07
LTBR-203ENST00000441074 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
LTBR-203ENST00000441074 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.07
LTBR-203ENST00000441074 TESK2Q96S53 571 aa15.46■□□□□ 0.07
LTBR-203ENST00000441074 LMTK2Q8IWU2 1503 aa15.46■□□□□ 0.06
LTBR-203ENST00000441074 C8orf34Q49A92 452 aa15.45■□□□□ 0.06
LTBR-203ENST00000441074 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
LTBR-203ENST00000441074 TMEM132EQ6IEE7 984 aa15.44■□□□□ 0.06
LTBR-203ENST00000441074 PTPRMP28827 1452 aa15.44■□□□□ 0.06
LTBR-203ENST00000441074 DISP3Q9P2K9 1392 aa15.44■□□□□ 0.06
LTBR-203ENST00000441074 NOS1P29475 1434 aa15.43■□□□□ 0.06
LTBR-203ENST00000441074 ZC3H13Q5T200 1668 aaKnown RBP15.43■□□□□ 0.06
LTBR-203ENST00000441074 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms