RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 DDX10Q13206 875 aaKnown RBP26.84■■□□□ 1.89
SNX17-203ENST00000440760 NRXN1Q9ULB1 1477 aa26.84■■□□□ 1.89
SNX17-203ENST00000440760 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
SNX17-203ENST00000440760 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
SNX17-203ENST00000440760 WASHC2AQ641Q2 1341 aa26.82■■□□□ 1.88
SNX17-203ENST00000440760 C11orf95C9JLR9 678 aaPredicted RBP26.82■■□□□ 1.88
SNX17-203ENST00000440760 STAC3Q96MF2 364 aa26.82■■□□□ 1.88
SNX17-203ENST00000440760 C3P01024 1663 aa26.81■■□□□ 1.88
SNX17-203ENST00000440760 NUTM2DQ5VT03 806 aaPredicted RBP26.8■■□□□ 1.88
SNX17-203ENST00000440760 IQGAP1P46940 1657 aa26.79■■□□□ 1.88
SNX17-203ENST00000440760 RPGRIP1LQ68CZ1 1315 aa26.77■■□□□ 1.88
SNX17-203ENST00000440760 PIK3C2GO75747 1445 aa26.77■■□□□ 1.88
SNX17-203ENST00000440760 ST20-MTHFSA0A0A6YYL1 179 aa26.77■■□□□ 1.88
SNX17-203ENST00000440760 CEBPAP49715 358 aaPredicted RBP26.77■■□□□ 1.88
SNX17-203ENST00000440760 CFAP70Q5T0N1 1121 aa26.76■■□□□ 1.87
SNX17-203ENST00000440760 MIER1Q8N108 512 aa26.75■■□□□ 1.87
SNX17-203ENST00000440760 TNRQ92752 1358 aa26.75■■□□□ 1.87
SNX17-203ENST00000440760 CCDC7Q96M83 1385 aa26.75■■□□□ 1.87
SNX17-203ENST00000440760 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
SNX17-203ENST00000440760 A2ML1A8K2U0 1454 aa26.74■■□□□ 1.87
SNX17-203ENST00000440760 STAG3Q9UJ98 1225 aa26.73■■□□□ 1.87
SNX17-203ENST00000440760 RIMS1Q86UR5 1692 aaKnown RBP26.72■■□□□ 1.87
SNX17-203ENST00000440760 KIF7Q2M1P5 1343 aa26.72■■□□□ 1.87
SNX17-203ENST00000440760 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
SNX17-203ENST00000440760 SCAF11Q99590 1463 aaKnown RBP26.68■■□□□ 1.86
SNX17-203ENST00000440760 UBR1Q8IWV7 1749 aa26.67■■□□□ 1.86
SNX17-203ENST00000440760 VGFO15240 615 aaPredicted RBP26.66■■□□□ 1.86
SNX17-203ENST00000440760 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
SNX17-203ENST00000440760 ADAMTSL3P82987 1691 aa26.65■■□□□ 1.86
SNX17-203ENST00000440760 ZFYVE9O95405 1425 aa26.65■■□□□ 1.86
SNX17-203ENST00000440760 ADGRB1O14514 1584 aa26.64■■□□□ 1.86
SNX17-203ENST00000440760 POLR3GLQ9BT43 218 aa26.64■■□□□ 1.85
SNX17-203ENST00000440760 RIMS2Q9UQ26 1411 aa26.63■■□□□ 1.85
SNX17-203ENST00000440760 C14orf93Q9H972 538 aaKnown RBP26.62■■□□□ 1.85
SNX17-203ENST00000440760 KDM5AP29375 1690 aaKnown RBP26.61■■□□□ 1.85
SNX17-203ENST00000440760 TESK2Q96S53 571 aa26.6■■□□□ 1.85
SNX17-203ENST00000440760 NLRP1Q9C000 1473 aa26.6■■□□□ 1.85
SNX17-203ENST00000440760 ASXL1Q8IXJ9 1541 aa26.59■■□□□ 1.85
SNX17-203ENST00000440760 TMEM132EQ6IEE7 984 aa26.59■■□□□ 1.85
SNX17-203ENST00000440760 MYO3AQ8NEV4 1616 aa26.59■■□□□ 1.85
SNX17-203ENST00000440760 DISP3Q9P2K9 1392 aa26.58■■□□□ 1.85
SNX17-203ENST00000440760 EIF3AQ14152 1382 aaKnown RBP26.56■■□□□ 1.84
SNX17-203ENST00000440760 ALKQ9UM73 1620 aa26.53■■□□□ 1.84
SNX17-203ENST00000440760 NRXN3Q9Y4C0 1643 aa26.52■■□□□ 1.84
SNX17-203ENST00000440760 TRAK1Q9UPV9 953 aa26.51■■□□□ 1.83
SNX17-203ENST00000440760 SETD1AO15047 1707 aaKnown RBP26.51■■□□□ 1.83
SNX17-203ENST00000440760 ARHGEF28Q8N1W1 1705 aaKnown RBP26.51■■□□□ 1.83
SNX17-203ENST00000440760 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
SNX17-203ENST00000440760 QRICH2Q9H0J4 1663 aa26.49■■□□□ 1.83
SNX17-203ENST00000440760 PTPRMP28827 1452 aa26.49■■□□□ 1.83
SNX17-203ENST00000440760 TMF1P82094 1093 aa26.47■■□□□ 1.83
SNX17-203ENST00000440760 CEP170BQ9Y4F5 1589 aaPredicted RBP26.46■■□□□ 1.83
SNX17-203ENST00000440760 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.45■■□□□ 1.82
SNX17-203ENST00000440760 ANP32CO43423 234 aa26.44■■□□□ 1.82
SNX17-203ENST00000440760 CENPJQ9HC77 1338 aaPredicted RBP26.43■■□□□ 1.82
SNX17-203ENST00000440760 STK26Q9P289 416 aa26.42■■□□□ 1.82
SNX17-203ENST00000440760 SLIT1O75093 1534 aa26.41■■□□□ 1.82
SNX17-203ENST00000440760 YTHDC2Q9H6S0 1430 aaKnown RBP26.41■■□□□ 1.82
SNX17-203ENST00000440760 ARHGAP23Q9P227 1491 aa26.4■■□□□ 1.82
SNX17-203ENST00000440760 LTKP29376 864 aa26.4■■□□□ 1.82
SNX17-203ENST00000440760 ZNF142P52746 1687 aaPredicted RBP26.39■■□□□ 1.82
SNX17-203ENST00000440760 MYOM1P52179 1685 aa26.38■■□□□ 1.81
SNX17-203ENST00000440760 SBNO2Q9Y2G9 1366 aa26.37■■□□□ 1.81
SNX17-203ENST00000440760 HDGFP51858 240 aaKnown RBP26.37■■□□□ 1.81
SNX17-203ENST00000440760 BCANQ96GW7 911 aa26.36■■□□□ 1.81
SNX17-203ENST00000440760 TXNDC2Q86VQ3 553 aa26.35■■□□□ 1.81
SNX17-203ENST00000440760 METP08581 1390 aa26.35■■□□□ 1.81
SNX17-203ENST00000440760 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
SNX17-203ENST00000440760 PLEKHG1Q9ULL1 1385 aa26.33■■□□□ 1.81
SNX17-203ENST00000440760 ADAMTS13Q76LX8 1427 aa26.33■■□□□ 1.81
SNX17-203ENST00000440760 THEMISQ8N1K5 641 aaPredicted RBP26.33■■□□□ 1.8
SNX17-203ENST00000440760 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
SNX17-203ENST00000440760 SETD1BQ9UPS6 1966 aaKnown RBP26.31■■□□□ 1.8
SNX17-203ENST00000440760 YTHDC1Q96MU7 727 aaKnown RBP26.31■■□□□ 1.8
SNX17-203ENST00000440760 EID1Q9Y6B2 187 aa26.31■■□□□ 1.8
SNX17-203ENST00000440760 TULP4Q9NRJ4 1543 aa26.31■■□□□ 1.8
SNX17-203ENST00000440760 LRPPRCP42704 1394 aaKnown RBP26.29■■□□□ 1.8
SNX17-203ENST00000440760 CDCA8Q53HL2 280 aa26.29■■□□□ 1.8
SNX17-203ENST00000440760 PRAM1Q96QH2 718 aa26.29■■□□□ 1.8
SNX17-203ENST00000440760 DLC1Q96QB1 1528 aa26.27■■□□□ 1.8
SNX17-203ENST00000440760 PRKRIP1Q9H875 184 aaPredicted RBP26.27■■□□□ 1.8
SNX17-203ENST00000440760 KNDC1Q76NI1 1749 aa26.27■■□□□ 1.8
SNX17-203ENST00000440760 PLEKHH1Q9ULM0 1364 aa26.24■■□□□ 1.79
SNX17-203ENST00000440760 SLC26A8Q96RN1 970 aa26.24■■□□□ 1.79
SNX17-203ENST00000440760 PANK3Q9H999 370 aa26.24■■□□□ 1.79
SNX17-203ENST00000440760 POGKQ9P215 609 aa26.24■■□□□ 1.79
SNX17-203ENST00000440760 MED14O60244 1454 aa26.23■■□□□ 1.79
SNX17-203ENST00000440760 SLC24A1O60721 1099 aa26.23■■□□□ 1.79
SNX17-203ENST00000440760 MINK1Q8N4C8 1332 aaPredicted RBP26.23■■□□□ 1.79
SNX17-203ENST00000440760 ABCC11Q96J66 1382 aa26.23■■□□□ 1.79
SNX17-203ENST00000440760 CCER2I3L3R5 266 aa26.22■■□□□ 1.79
SNX17-203ENST00000440760 CPS1P31327 1500 aa26.22■■□□□ 1.79
SNX17-203ENST00000440760 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
SNX17-203ENST00000440760 PER1O15534 1290 aaPredicted RBP26.18■■□□□ 1.78
SNX17-203ENST00000440760 EVC2Q86UK5 1308 aa26.18■■□□□ 1.78
SNX17-203ENST00000440760 TECPR2O15040 1411 aa26.18■■□□□ 1.78
SNX17-203ENST00000440760 DIP2AQ14689 1571 aa26.18■■□□□ 1.78
SNX17-203ENST00000440760 PTPRUQ92729 1446 aa26.17■■□□□ 1.78
SNX17-203ENST00000440760 CABP2Q9NPB3 220 aa26.16■■□□□ 1.78
SNX17-203ENST00000440760 ROBO2Q9HCK4 1378 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms