RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
PGBD4P3-201ENST00000440731 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
PGBD4P3-201ENST00000440731 SLC24A3Q9HC58 644 aa8.47□□□□□ -1.05
PGBD4P3-201ENST00000440731 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.06
PGBD4P3-201ENST00000440731 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
PGBD4P3-201ENST00000440731 DNAJB2P25686 324 aa8.45□□□□□ -1.06
PGBD4P3-201ENST00000440731 PHOX2BQ99453 314 aa8.44□□□□□ -1.06
PGBD4P3-201ENST00000440731 SOWAHBA6NEL2 793 aa8.43□□□□□ -1.06
PGBD4P3-201ENST00000440731 THSD4Q6ZMP0 1018 aa8.43□□□□□ -1.06
PGBD4P3-201ENST00000440731 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
PGBD4P3-201ENST00000440731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
PGBD4P3-201ENST00000440731 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
PGBD4P3-201ENST00000440731 PPP4CP60510 307 aa8.42□□□□□ -1.06
PGBD4P3-201ENST00000440731 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
PGBD4P3-201ENST00000440731 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
PGBD4P3-201ENST00000440731 AK7Q96M32 723 aa8.41□□□□□ -1.06
PGBD4P3-201ENST00000440731 TMEM134Q9H6X4 195 aa8.41□□□□□ -1.06
PGBD4P3-201ENST00000440731 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
PGBD4P3-201ENST00000440731 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
PGBD4P3-201ENST00000440731 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
PGBD4P3-201ENST00000440731 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
PGBD4P3-201ENST00000440731 TTLL12Q14166 644 aaPredicted RBP8.38□□□□□ -1.07
PGBD4P3-201ENST00000440731 RDH13Q8NBN7 331 aa8.38□□□□□ -1.07
PGBD4P3-201ENST00000440731 TRIM66O15016 1216 aa8.37□□□□□ -1.07
PGBD4P3-201ENST00000440731 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
PGBD4P3-201ENST00000440731 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
PGBD4P3-201ENST00000440731 CLCN1P35523 988 aa8.34□□□□□ -1.07
PGBD4P3-201ENST00000440731 GPCPD1Q9NPB8 672 aa8.34□□□□□ -1.07
PGBD4P3-201ENST00000440731 SLC10A3P09131 477 aa8.33□□□□□ -1.08
PGBD4P3-201ENST00000440731 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
PGBD4P3-201ENST00000440731 CFHP08603 1231 aa8.32□□□□□ -1.08
PGBD4P3-201ENST00000440731 PDE4DQ08499 809 aa8.32□□□□□ -1.08
PGBD4P3-201ENST00000440731 SULF1Q8IWU6 871 aa8.32□□□□□ -1.08
PGBD4P3-201ENST00000440731 APLP1P51693 650 aa8.31□□□□□ -1.08
PGBD4P3-201ENST00000440731 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
PGBD4P3-201ENST00000440731 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
PGBD4P3-201ENST00000440731 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
PGBD4P3-201ENST00000440731 AMHR2Q16671 573 aa8.3□□□□□ -1.08
PGBD4P3-201ENST00000440731 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
PGBD4P3-201ENST00000440731 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
PGBD4P3-201ENST00000440731 COPS2P61201 443 aa8.28□□□□□ -1.08
PGBD4P3-201ENST00000440731 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
PGBD4P3-201ENST00000440731 FAM217BQ9NTX9 383 aaPredicted RBP8.28□□□□□ -1.08
PGBD4P3-201ENST00000440731 LCE2BO14633 110 aa8.27□□□□□ -1.09
PGBD4P3-201ENST00000440731 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
PGBD4P3-201ENST00000440731 CD46P15529 392 aa8.26□□□□□ -1.09
PGBD4P3-201ENST00000440731 PUS10Q3MIT2 529 aaKnown RBP8.26□□□□□ -1.09
PGBD4P3-201ENST00000440731 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
PGBD4P3-201ENST00000440731 PRR14Q9BWN1 585 aa8.26□□□□□ -1.09
PGBD4P3-201ENST00000440731 PCDHB3Q9Y5E6 796 aa8.26□□□□□ -1.09
PGBD4P3-201ENST00000440731 MS4A1P11836 297 aa8.25□□□□□ -1.09
PGBD4P3-201ENST00000440731 GCGRP47871 477 aa8.25□□□□□ -1.09
PGBD4P3-201ENST00000440731 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
PGBD4P3-201ENST00000440731 TRAF7Q6Q0C0 670 aa8.25□□□□□ -1.09
PGBD4P3-201ENST00000440731 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
PGBD4P3-201ENST00000440731 FUT2Q10981 343 aa8.24□□□□□ -1.09
PGBD4P3-201ENST00000440731 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
PGBD4P3-201ENST00000440731 NUTM1Q86Y26 1132 aa8.24□□□□□ -1.09
PGBD4P3-201ENST00000440731 BEGAINQ9BUH8 593 aa8.24□□□□□ -1.09
PGBD4P3-201ENST00000440731 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
PGBD4P3-201ENST00000440731 BLOC1S3Q6QNY0 202 aa8.23□□□□□ -1.09
PGBD4P3-201ENST00000440731 MTRQ99707 1265 aa8.23□□□□□ -1.09
PGBD4P3-201ENST00000440731 KDM4AO75164 1064 aa8.22□□□□□ -1.09
PGBD4P3-201ENST00000440731 ZNF516Q92618 1163 aa8.21□□□□□ -1.1
PGBD4P3-201ENST00000440731 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
PGBD4P3-201ENST00000440731 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
PGBD4P3-201ENST00000440731 KCNC4Q03721 635 aa8.2□□□□□ -1.1
PGBD4P3-201ENST00000440731 TJAP1Q5JTD0 557 aa8.2□□□□□ -1.1
PGBD4P3-201ENST00000440731 GFRA3O60609 400 aa8.19□□□□□ -1.1
PGBD4P3-201ENST00000440731 GRIPAP1Q4V328 841 aa8.19□□□□□ -1.1
PGBD4P3-201ENST00000440731 HLA-CQ95604 372 aa8.19□□□□□ -1.1
PGBD4P3-201ENST00000440731 IL21Q9HBE4 155 aa8.19□□□□□ -1.1
PGBD4P3-201ENST00000440731 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
PGBD4P3-201ENST00000440731 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
PGBD4P3-201ENST00000440731 ZPR1O75312 459 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 NR1I2O75469 434 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 SCUBE3Q8IX30 993 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
PGBD4P3-201ENST00000440731 MORN1Q5T089 497 aa8.16□□□□□ -1.1
PGBD4P3-201ENST00000440731 IL27Q8NEV9 243 aa8.16□□□□□ -1.1
PGBD4P3-201ENST00000440731 SLC27A5Q9Y2P5 690 aa8.16□□□□□ -1.1
PGBD4P3-201ENST00000440731 TLL1O43897 1013 aa8.15□□□□□ -1.1
PGBD4P3-201ENST00000440731 NDUFV2P19404 249 aa8.15□□□□□ -1.1
PGBD4P3-201ENST00000440731 USP46P62068 366 aa8.15□□□□□ -1.1
PGBD4P3-201ENST00000440731 TBC1D2Q9BYX2 928 aa8.15□□□□□ -1.1
PGBD4P3-201ENST00000440731 MOXD2PA6NHM9 499 aa8.14□□□□□ -1.11
PGBD4P3-201ENST00000440731 HOXA2O43364 376 aa8.14□□□□□ -1.11
PGBD4P3-201ENST00000440731 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
PGBD4P3-201ENST00000440731 FDX1P10109 184 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 ZNF787Q6DD87 383 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 SPSB2Q99619 263 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
PGBD4P3-201ENST00000440731 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
PGBD4P3-201ENST00000440731 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
PGBD4P3-201ENST00000440731 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms