RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
LINC02048-201ENST00000440556 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
LINC02048-201ENST00000440556 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.44■□□□□ 0.38
LINC02048-201ENST00000440556 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
LINC02048-201ENST00000440556 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
LINC02048-201ENST00000440556 SHROOM2Q13796 1616 aa17.42■□□□□ 0.38
LINC02048-201ENST00000440556 OFD1O75665 1012 aa17.42■□□□□ 0.38
LINC02048-201ENST00000440556 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
LINC02048-201ENST00000440556 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
LINC02048-201ENST00000440556 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
LINC02048-201ENST00000440556 NGEFQ8N5V2 710 aa17.42■□□□□ 0.38
LINC02048-201ENST00000440556 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
LINC02048-201ENST00000440556 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
LINC02048-201ENST00000440556 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
LINC02048-201ENST00000440556 SLFN5Q08AF3 891 aa17.4■□□□□ 0.38
LINC02048-201ENST00000440556 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
LINC02048-201ENST00000440556 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
LINC02048-201ENST00000440556 CROCC2H7BZ55 1655 aa17.4■□□□□ 0.38
LINC02048-201ENST00000440556 COL17A1Q9UMD9 1497 aaPredicted RBP17.4■□□□□ 0.38
LINC02048-201ENST00000440556 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
LINC02048-201ENST00000440556 SEC24BO95487 1268 aa17.4■□□□□ 0.38
LINC02048-201ENST00000440556 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
LINC02048-201ENST00000440556 TRPM1Q7Z4N2 1603 aa17.39■□□□□ 0.37
LINC02048-201ENST00000440556 PKD2Q13563 968 aa17.39■□□□□ 0.37
LINC02048-201ENST00000440556 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
LINC02048-201ENST00000440556 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
LINC02048-201ENST00000440556 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.37
LINC02048-201ENST00000440556 PPP1R9BQ96SB3 815 aa17.38■□□□□ 0.37
LINC02048-201ENST00000440556 NUP153P49790 1475 aaKnown RBP17.38■□□□□ 0.37
LINC02048-201ENST00000440556 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
LINC02048-201ENST00000440556 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC02048-201ENST00000440556 ZSCAN30Q86W11 494 aa17.38■□□□□ 0.37
LINC02048-201ENST00000440556 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 HS1BP3Q53T59 392 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 ANP32BQ92688 251 aaKnown RBP17.37■□□□□ 0.37
LINC02048-201ENST00000440556 ARXQ96QS3 562 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
LINC02048-201ENST00000440556 IGHDP01880 384 aa17.36■□□□□ 0.37
LINC02048-201ENST00000440556 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
LINC02048-201ENST00000440556 SHANK2Q9UPX8 1470 aa17.35■□□□□ 0.37
LINC02048-201ENST00000440556 NCLP19338 710 aaKnown RBP17.35■□□□□ 0.37
LINC02048-201ENST00000440556 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
LINC02048-201ENST00000440556 ADAMTS8Q9UP79 889 aa17.35■□□□□ 0.37
LINC02048-201ENST00000440556 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
LINC02048-201ENST00000440556 GBP4Q96PP9 640 aa17.33■□□□□ 0.37
LINC02048-201ENST00000440556 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
LINC02048-201ENST00000440556 MSNP26038 577 aaKnown RBP17.33■□□□□ 0.36
LINC02048-201ENST00000440556 E9PSI1 815 aa17.32■□□□□ 0.36
LINC02048-201ENST00000440556 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
LINC02048-201ENST00000440556 PLB1Q6P1J6 1458 aa17.32■□□□□ 0.36
LINC02048-201ENST00000440556 PTPRGP23470 1445 aa17.31■□□□□ 0.36
LINC02048-201ENST00000440556 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
LINC02048-201ENST00000440556 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
LINC02048-201ENST00000440556 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
LINC02048-201ENST00000440556 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
LINC02048-201ENST00000440556 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
LINC02048-201ENST00000440556 FGD1P98174 961 aa17.29■□□□□ 0.36
LINC02048-201ENST00000440556 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
LINC02048-201ENST00000440556 DYNC1I1O14576 645 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 RIPK4P57078 832 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 CSPP1Q1MSJ5 1256 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 PANK3Q9H999 370 aa17.28■□□□□ 0.36
LINC02048-201ENST00000440556 DDIT3P35638 169 aa17.27■□□□□ 0.35
LINC02048-201ENST00000440556 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
LINC02048-201ENST00000440556 ANKRD50Q9ULJ7 1429 aa17.26■□□□□ 0.35
LINC02048-201ENST00000440556 ZNF500O60304 480 aaPredicted RBP17.26■□□□□ 0.35
LINC02048-201ENST00000440556 SNX21Q969T3 373 aa17.26■□□□□ 0.35
LINC02048-201ENST00000440556 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
LINC02048-201ENST00000440556 RWDD1Q9H446 243 aaPredicted RBP17.26■□□□□ 0.35
LINC02048-201ENST00000440556 TMF1P82094 1093 aa17.25■□□□□ 0.35
LINC02048-201ENST00000440556 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
LINC02048-201ENST00000440556 MCM5P33992 734 aa17.25■□□□□ 0.35
LINC02048-201ENST00000440556 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
LINC02048-201ENST00000440556 NASPP49321 788 aaPredicted RBP17.24■□□□□ 0.35
LINC02048-201ENST00000440556 SMC5Q8IY18 1101 aa17.23■□□□□ 0.35
LINC02048-201ENST00000440556 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
LINC02048-201ENST00000440556 BCAR3O75815 825 aa17.23■□□□□ 0.35
LINC02048-201ENST00000440556 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
LINC02048-201ENST00000440556 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
LINC02048-201ENST00000440556 GPATCH8Q9UKJ3 1502 aaKnown RBP17.22■□□□□ 0.35
LINC02048-201ENST00000440556 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
LINC02048-201ENST00000440556 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
LINC02048-201ENST00000440556 ABCA8O94911 1581 aa17.22■□□□□ 0.35
LINC02048-201ENST00000440556 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
LINC02048-201ENST00000440556 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 NUP155O75694 1391 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 TESK2Q96S53 571 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
LINC02048-201ENST00000440556 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
LINC02048-201ENST00000440556 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
LINC02048-201ENST00000440556 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
LINC02048-201ENST00000440556 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms