RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 HIRIP3Q9BW71 556 aaPredicted RBP30.03■■■□□ 2.4
CDKN1C-204ENST00000440480 TMEM131LA2VDJ0 1609 aa30.03■■■□□ 2.4
CDKN1C-204ENST00000440480 MYOM2P54296 1465 aa30.03■■■□□ 2.4
CDKN1C-204ENST00000440480 NBPF1Q3BBV0 1214 aa30.02■■■□□ 2.4
CDKN1C-204ENST00000440480 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
CDKN1C-204ENST00000440480 PTPRMP28827 1452 aa30.01■■■□□ 2.39
CDKN1C-204ENST00000440480 HSPA5P11021 654 aaKnown RBP30■■■□□ 2.39
CDKN1C-204ENST00000440480 A2ML1A8K2U0 1454 aa30■■■□□ 2.39
CDKN1C-204ENST00000440480 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
CDKN1C-204ENST00000440480 HDGFP51858 240 aaKnown RBP29.95■■■□□ 2.39
CDKN1C-204ENST00000440480 CFAP70Q5T0N1 1121 aa29.95■■■□□ 2.39
CDKN1C-204ENST00000440480 NRXN1Q9ULB1 1477 aa29.95■■■□□ 2.38
CDKN1C-204ENST00000440480 NEXMIFQ5QGS0 1516 aa29.95■■■□□ 2.38
CDKN1C-204ENST00000440480 ZFYVE9O95405 1425 aa29.94■■■□□ 2.38
CDKN1C-204ENST00000440480 GPRASP1Q5JY77 1395 aa29.93■■■□□ 2.38
CDKN1C-204ENST00000440480 TRPM1Q7Z4N2 1603 aa29.93■■■□□ 2.38
CDKN1C-204ENST00000440480 IFT172Q9UG01 1749 aa29.92■■■□□ 2.38
CDKN1C-204ENST00000440480 USP47Q96K76 1375 aa29.92■■■□□ 2.38
CDKN1C-204ENST00000440480 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.92■■■□□ 2.38
CDKN1C-204ENST00000440480 PPLO60437 1756 aa29.91■■■□□ 2.38
CDKN1C-204ENST00000440480 C14orf93Q9H972 538 aaKnown RBP29.9■■■□□ 2.38
CDKN1C-204ENST00000440480 PIK3C2GO75747 1445 aa29.9■■■□□ 2.38
CDKN1C-204ENST00000440480 RIMS2Q9UQ26 1411 aa29.9■■■□□ 2.38
CDKN1C-204ENST00000440480 DDX10Q13206 875 aaKnown RBP29.89■■■□□ 2.38
CDKN1C-204ENST00000440480 THEMISQ8N1K5 641 aaPredicted RBP29.89■■■□□ 2.38
CDKN1C-204ENST00000440480 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
CDKN1C-204ENST00000440480 MYO5BQ9ULV0 1848 aa29.87■■■□□ 2.37
CDKN1C-204ENST00000440480 TMEM2Q9UHN6 1383 aa29.86■■■□□ 2.37
CDKN1C-204ENST00000440480 KDM5AP29375 1690 aaKnown RBP29.83■■■□□ 2.37
CDKN1C-204ENST00000440480 ST20-MTHFSA0A0A6YYL1 179 aa29.83■■■□□ 2.37
CDKN1C-204ENST00000440480 SENP3Q9H4L4 574 aaPredicted RBP29.83■■■□□ 2.37
CDKN1C-204ENST00000440480 UBR1Q8IWV7 1749 aa29.81■■■□□ 2.36
CDKN1C-204ENST00000440480 MYO3AQ8NEV4 1616 aa29.81■■■□□ 2.36
CDKN1C-204ENST00000440480 EID1Q9Y6B2 187 aa29.8■■■□□ 2.36
CDKN1C-204ENST00000440480 KIAA1210Q9ULL0 1709 aa29.79■■■□□ 2.36
CDKN1C-204ENST00000440480 TXNDC2Q86VQ3 553 aa29.78■■■□□ 2.36
CDKN1C-204ENST00000440480 TMEM132EQ6IEE7 984 aa29.78■■■□□ 2.36
CDKN1C-204ENST00000440480 SETD1BQ9UPS6 1966 aaKnown RBP29.77■■■□□ 2.36
CDKN1C-204ENST00000440480 LAMC1P11047 1609 aa29.76■■■□□ 2.36
CDKN1C-204ENST00000440480 LTKP29376 864 aa29.75■■■□□ 2.35
CDKN1C-204ENST00000440480 BCANQ96GW7 911 aa29.75■■■□□ 2.35
CDKN1C-204ENST00000440480 SCAF11Q99590 1463 aaKnown RBP29.75■■■□□ 2.35
CDKN1C-204ENST00000440480 SCAF1Q9H7N4 1312 aaKnown RBP29.75■■■□□ 2.35
CDKN1C-204ENST00000440480 CEP170BQ9Y4F5 1589 aaPredicted RBP29.73■■■□□ 2.35
CDKN1C-204ENST00000440480 ANP32CO43423 234 aa29.72■■■□□ 2.35
CDKN1C-204ENST00000440480 SETBP1Q9Y6X0 1596 aa29.71■■■□□ 2.35
CDKN1C-204ENST00000440480 C11orf95C9JLR9 678 aaPredicted RBP29.71■■■□□ 2.35
CDKN1C-204ENST00000440480 EIF3AQ14152 1382 aaKnown RBP29.7■■■□□ 2.35
CDKN1C-204ENST00000440480 SLIT1O75093 1534 aa29.7■■■□□ 2.34
CDKN1C-204ENST00000440480 TRAK1Q9UPV9 953 aa29.69■■■□□ 2.34
CDKN1C-204ENST00000440480 ARHGAP23Q9P227 1491 aa29.69■■■□□ 2.34
CDKN1C-204ENST00000440480 WASHC2AQ641Q2 1341 aa29.68■■■□□ 2.34
CDKN1C-204ENST00000440480 ADGRB1O14514 1584 aa29.67■■■□□ 2.34
CDKN1C-204ENST00000440480 ZNF142P52746 1687 aaPredicted RBP29.66■■■□□ 2.34
CDKN1C-204ENST00000440480 PLEKHG1Q9ULL1 1385 aa29.65■■■□□ 2.34
CDKN1C-204ENST00000440480 ALKQ9UM73 1620 aa29.65■■■□□ 2.34
CDKN1C-204ENST00000440480 ANKLE2Q86XL3 938 aa29.64■■■□□ 2.34
CDKN1C-204ENST00000440480 TESK2Q96S53 571 aa29.64■■■□□ 2.34
CDKN1C-204ENST00000440480 CCER2I3L3R5 266 aa29.64■■■□□ 2.33
CDKN1C-204ENST00000440480 STK26Q9P289 416 aa29.63■■■□□ 2.33
CDKN1C-204ENST00000440480 KIF7Q2M1P5 1343 aa29.62■■■□□ 2.33
CDKN1C-204ENST00000440480 CCDC7Q96M83 1385 aa29.62■■■□□ 2.33
CDKN1C-204ENST00000440480 SLC24A1O60721 1099 aa29.61■■■□□ 2.33
CDKN1C-204ENST00000440480 IQGAP1P46940 1657 aa29.6■■■□□ 2.33
CDKN1C-204ENST00000440480 TMF1P82094 1093 aa29.59■■■□□ 2.33
CDKN1C-204ENST00000440480 POLR3GLQ9BT43 218 aa29.58■■■□□ 2.33
CDKN1C-204ENST00000440480 YTHDC2Q9H6S0 1430 aaKnown RBP29.57■■■□□ 2.32
CDKN1C-204ENST00000440480 CENPJQ9HC77 1338 aaPredicted RBP29.57■■■□□ 2.32
CDKN1C-204ENST00000440480 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
CDKN1C-204ENST00000440480 METP08581 1390 aa29.55■■■□□ 2.32
CDKN1C-204ENST00000440480 GTF3C3Q9Y5Q9 886 aa29.55■■■□□ 2.32
CDKN1C-204ENST00000440480 ASXL1Q8IXJ9 1541 aa29.54■■■□□ 2.32
CDKN1C-204ENST00000440480 ADAMTS13Q76LX8 1427 aa29.54■■■□□ 2.32
CDKN1C-204ENST00000440480 TBX22Q9Y458 520 aa29.54■■■□□ 2.32
CDKN1C-204ENST00000440480 NRXN3Q9Y4C0 1643 aa29.53■■■□□ 2.32
CDKN1C-204ENST00000440480 POLR1AO95602 1720 aaPredicted RBP29.53■■■□□ 2.32
CDKN1C-204ENST00000440480 LMTK3Q96Q04 1460 aa29.52■■■□□ 2.32
CDKN1C-204ENST00000440480 LRPPRCP42704 1394 aaKnown RBP29.51■■■□□ 2.32
CDKN1C-204ENST00000440480 POGKQ9P215 609 aa29.5■■■□□ 2.31
CDKN1C-204ENST00000440480 CDCA8Q53HL2 280 aa29.5■■■□□ 2.31
CDKN1C-204ENST00000440480 ABCC11Q96J66 1382 aa29.5■■■□□ 2.31
CDKN1C-204ENST00000440480 DISP3Q9P2K9 1392 aa29.49■■■□□ 2.31
CDKN1C-204ENST00000440480 HSPA2P54652 639 aa29.48■■■□□ 2.31
CDKN1C-204ENST00000440480 PRAM1Q96QH2 718 aa29.48■■■□□ 2.31
CDKN1C-204ENST00000440480 MED14O60244 1454 aa29.47■■■□□ 2.31
CDKN1C-204ENST00000440480 SBNO2Q9Y2G9 1366 aa29.47■■■□□ 2.31
CDKN1C-204ENST00000440480 SAFB2Q14151 953 aaKnown RBP eCLIP29.46■■■□□ 2.31
CDKN1C-204ENST00000440480 SETD1AO15047 1707 aaKnown RBP29.44■■■□□ 2.3
CDKN1C-204ENST00000440480 NCKAP5LQ9HCH0 1330 aa29.43■■■□□ 2.3
CDKN1C-204ENST00000440480 SIRT1Q96EB6 747 aa29.42■■■□□ 2.3
CDKN1C-204ENST00000440480 WAPLQ7Z5K2 1190 aa29.41■■■□□ 2.3
CDKN1C-204ENST00000440480 AMOTL2Q9Y2J4 779 aa29.39■■■□□ 2.3
CDKN1C-204ENST00000440480 DLC1Q96QB1 1528 aa29.38■■■□□ 2.29
CDKN1C-204ENST00000440480 NPHP4O75161 1426 aaPredicted RBP29.38■■■□□ 2.29
CDKN1C-204ENST00000440480 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
CDKN1C-204ENST00000440480 ARHGEF28Q8N1W1 1705 aaKnown RBP29.38■■■□□ 2.29
CDKN1C-204ENST00000440480 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
CDKN1C-204ENST00000440480 EVC2Q86UK5 1308 aa29.37■■■□□ 2.29
CDKN1C-204ENST00000440480 TECPR2O15040 1411 aa29.37■■■□□ 2.29
CDKN1C-204ENST00000440480 PIK3R4Q99570 1358 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms