RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 MSH6P52701 1360 aa21.62■■□□□ 1.05
SMC2-204ENST00000440179 SLAIN2Q9P270 581 aa21.62■■□□□ 1.05
SMC2-204ENST00000440179 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
SMC2-204ENST00000440179 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
SMC2-204ENST00000440179 ADGRB3O60242 1522 aa21.61■■□□□ 1.05
SMC2-204ENST00000440179 NOS1P29475 1434 aa21.61■■□□□ 1.05
SMC2-204ENST00000440179 LRP6O75581 1613 aa21.6■■□□□ 1.05
SMC2-204ENST00000440179 KANK1Q14678 1352 aa21.59■■□□□ 1.05
SMC2-204ENST00000440179 UPF1Q92900 1129 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMC2-204ENST00000440179 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
SMC2-204ENST00000440179 DAPK1P53355 1430 aa21.55■■□□□ 1.04
SMC2-204ENST00000440179 CHD2O14647 1828 aaKnown RBP21.54■■□□□ 1.04
SMC2-204ENST00000440179 FGD6Q6ZV73 1430 aa21.53■■□□□ 1.04
SMC2-204ENST00000440179 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
SMC2-204ENST00000440179 SPATA31A6Q5VVP1 1343 aa21.52■■□□□ 1.03
SMC2-204ENST00000440179 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
SMC2-204ENST00000440179 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
SMC2-204ENST00000440179 BCANQ96GW7 911 aa21.5■■□□□ 1.03
SMC2-204ENST00000440179 SLC52A1Q9NWF4 448 aa21.5■■□□□ 1.03
SMC2-204ENST00000440179 AHDC1Q5TGY3 1603 aaPredicted RBP21.49■■□□□ 1.03
SMC2-204ENST00000440179 NCBP3Q53F19 620 aaKnown RBP21.49■■□□□ 1.03
SMC2-204ENST00000440179 ZNF772Q68DY9 489 aaPredicted RBP21.49■■□□□ 1.03
SMC2-204ENST00000440179 NCOA3Q9Y6Q9 1424 aa21.48■■□□□ 1.03
SMC2-204ENST00000440179 SHPRHQ149N8 1683 aa21.47■■□□□ 1.03
SMC2-204ENST00000440179 MEX3CQ5U5Q3 659 aaKnown RBP21.47■■□□□ 1.03
SMC2-204ENST00000440179 MYO5BQ9ULV0 1848 aa21.47■■□□□ 1.03
SMC2-204ENST00000440179 ANKRD30AQ9BXX3 1397 aa21.47■■□□□ 1.03
SMC2-204ENST00000440179 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
SMC2-204ENST00000440179 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
SMC2-204ENST00000440179 HOXD11P31277 338 aaPredicted RBP21.44■■□□□ 1.02
SMC2-204ENST00000440179 TBX22Q9Y458 520 aa21.44■■□□□ 1.02
SMC2-204ENST00000440179 RPRD2Q5VT52 1461 aaKnown RBP21.44■■□□□ 1.02
SMC2-204ENST00000440179 TMEM131LA2VDJ0 1609 aa21.44■■□□□ 1.02
SMC2-204ENST00000440179 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
SMC2-204ENST00000440179 DIP2AQ14689 1571 aa21.43■■□□□ 1.02
SMC2-204ENST00000440179 GCC2Q8IWJ2 1684 aa21.43■■□□□ 1.02
SMC2-204ENST00000440179 ADAMTS13Q76LX8 1427 aa21.42■■□□□ 1.02
SMC2-204ENST00000440179 CDK12Q9NYV4 1490 aaPredicted RBP21.42■■□□□ 1.02
SMC2-204ENST00000440179 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
SMC2-204ENST00000440179 RXRBP28702 533 aa21.41■■□□□ 1.02
SMC2-204ENST00000440179 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
SMC2-204ENST00000440179 CADPS2Q86UW7 1296 aa21.4■■□□□ 1.02
SMC2-204ENST00000440179 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
SMC2-204ENST00000440179 C19orf44Q9H6X5 657 aa21.39■■□□□ 1.01
SMC2-204ENST00000440179 ADGRL2O95490 1459 aa21.39■■□□□ 1.01
SMC2-204ENST00000440179 ATF3P18847 181 aa21.37■■□□□ 1.01
SMC2-204ENST00000440179 BRINP3Q76B58 766 aa21.37■■□□□ 1.01
SMC2-204ENST00000440179 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
SMC2-204ENST00000440179 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
SMC2-204ENST00000440179 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
SMC2-204ENST00000440179 NUTM2BA6NNL0 878 aaPredicted RBP21.35■■□□□ 1.01
SMC2-204ENST00000440179 NUTM2EB1AL46 878 aaPredicted RBP21.35■■□□□ 1.01
SMC2-204ENST00000440179 NUTM2AQ8IVF1 878 aaPredicted RBP21.35■■□□□ 1.01
SMC2-204ENST00000440179 AFF2P51816 1311 aa21.34■■□□□ 1.01
SMC2-204ENST00000440179 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
SMC2-204ENST00000440179 PTPRUQ92729 1446 aa21.33■■□□□ 1.01
SMC2-204ENST00000440179 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1.01
SMC2-204ENST00000440179 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMC2-204ENST00000440179 RGS12O14924 1447 aa21.32■■□□□ 1
SMC2-204ENST00000440179 ASXL1Q8IXJ9 1541 aa21.32■■□□□ 1
SMC2-204ENST00000440179 SETD5Q9C0A6 1442 aa21.31■■□□□ 1
SMC2-204ENST00000440179 DCCP43146 1447 aa21.29■■□□□ 1
SMC2-204ENST00000440179 CHGAP10645 457 aaKnown RBP21.29■■□□□ 1
SMC2-204ENST00000440179 AMOTL2Q9Y2J4 779 aa21.29■■□□□ 1
SMC2-204ENST00000440179 TRPM2O94759 1503 aa21.29■■□□□ 1
SMC2-204ENST00000440179 NHSL1Q5SYE7 1610 aa21.28■■□□□ 1
SMC2-204ENST00000440179 MST1RQ04912 1400 aa21.27■■□□□ 1
SMC2-204ENST00000440179 UNC13BO14795 1591 aa21.27■□□□□ 0.99
SMC2-204ENST00000440179 EP400Q96L91 3159 aa21.26■□□□□ 0.99
SMC2-204ENST00000440179 E9PCH4 1651 aa21.25■□□□□ 0.99
SMC2-204ENST00000440179 XRN1Q8IZH2 1706 aaKnown RBP21.25■□□□□ 0.99
SMC2-204ENST00000440179 RBM6P78332 1123 aaKnown RBP21.24■□□□□ 0.99
SMC2-204ENST00000440179 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
SMC2-204ENST00000440179 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
SMC2-204ENST00000440179 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
SMC2-204ENST00000440179 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
SMC2-204ENST00000440179 APLP2Q06481 763 aa21.21■□□□□ 0.99
SMC2-204ENST00000440179 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
SMC2-204ENST00000440179 LRRC59Q96AG4 307 aaKnown RBP21.21■□□□□ 0.99
SMC2-204ENST00000440179 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
SMC2-204ENST00000440179 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
SMC2-204ENST00000440179 IQGAP3Q86VI3 1631 aa21.16■□□□□ 0.98
SMC2-204ENST00000440179 METP08581 1390 aa21.16■□□□□ 0.98
SMC2-204ENST00000440179 DCAF8L1A6NGE4 600 aa21.16■□□□□ 0.98
SMC2-204ENST00000440179 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
SMC2-204ENST00000440179 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
SMC2-204ENST00000440179 ATAD2Q6PL18 1390 aa21.13■□□□□ 0.97
SMC2-204ENST00000440179 NALCNQ8IZF0 1738 aa21.12■□□□□ 0.97
SMC2-204ENST00000440179 ADAMTS2O95450 1211 aa21.12■□□□□ 0.97
SMC2-204ENST00000440179 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
SMC2-204ENST00000440179 KCNA4P22459 653 aa21.11■□□□□ 0.97
SMC2-204ENST00000440179 LAMC1P11047 1609 aa21.11■□□□□ 0.97
SMC2-204ENST00000440179 C1orf167Q5SNV9 1468 aa21.09■□□□□ 0.97
SMC2-204ENST00000440179 NUP155O75694 1391 aa21.07■□□□□ 0.96
SMC2-204ENST00000440179 ROCK1Q13464 1354 aa21.07■□□□□ 0.96
SMC2-204ENST00000440179 USP21Q9UK80 565 aa21.06■□□□□ 0.96
SMC2-204ENST00000440179 SOS2Q07890 1332 aaPredicted RBP21.05■□□□□ 0.96
SMC2-204ENST00000440179 ATRNO75882 1429 aa21.05■□□□□ 0.96
SMC2-204ENST00000440179 FNBP4Q8N3X1 1017 aaPredicted RBP21.05■□□□□ 0.96
SMC2-204ENST00000440179 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms