RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 ARID3AQ99856 593 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
BDNF-211ENST00000439476 TICAM2Q86XR7 235 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
BDNF-211ENST00000439476 SYAP1Q96A49 352 aaPredicted RBP7.95□□□□□ -1.14
BDNF-211ENST00000439476 MIA2Q96PC5 1412 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 EHBP1L1Q8N3D4 1523 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 NCOA1Q15788 1441 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 APAF1O14727 1248 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 NGEFQ8N5V2 710 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 CGNL1Q0VF96 1302 aa7.94□□□□□ -1.14
BDNF-211ENST00000439476 COG6Q9Y2V7 657 aa7.93□□□□□ -1.14
BDNF-211ENST00000439476 BIVM-ERCC5R4GMW8 1640 aa7.93□□□□□ -1.14
BDNF-211ENST00000439476 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
BDNF-211ENST00000439476 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
BDNF-211ENST00000439476 U2AF1L5P0DN76 240 aaPredicted RBP7.92□□□□□ -1.14
BDNF-211ENST00000439476 KCNJ4P48050 445 aa7.92□□□□□ -1.14
BDNF-211ENST00000439476 U2AF1Q01081 240 aaKnown RBP eCLIP7.92□□□□□ -1.14
BDNF-211ENST00000439476 FAM43BQ6ZT52 329 aaPredicted RBP7.92□□□□□ -1.14
BDNF-211ENST00000439476 ANKRD50Q9ULJ7 1429 aa7.92□□□□□ -1.14
BDNF-211ENST00000439476 AQRO60306 1485 aaKnown RBP eCLIP7.92□□□□□ -1.14
BDNF-211ENST00000439476 ITPRIPQ8IWB1 547 aa7.92□□□□□ -1.14
BDNF-211ENST00000439476 RNF216Q9NWF9 866 aaPredicted RBP7.91□□□□□ -1.14
BDNF-211ENST00000439476 PRDM2Q13029 1718 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 ANKRD30BQ9BXX2 1392 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 SUPT6HQ7KZ85 1726 aaKnown RBP7.91□□□□□ -1.14
BDNF-211ENST00000439476 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 RRP7AQ9Y3A4 280 aaKnown RBP7.91□□□□□ -1.14
BDNF-211ENST00000439476 PTPN23Q9H3S7 1636 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 HMGB1P09429 215 aaKnown RBP7.91□□□□□ -1.14
BDNF-211ENST00000439476 KIAA2012Q0VF49 1180 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 HDGFL2Q7Z4V5 671 aaPredicted RBP7.91□□□□□ -1.14
BDNF-211ENST00000439476 PSMD1Q99460 953 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 BCL2L13Q9BXK5 485 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 KIAA1107Q9UPP5 1409 aa7.91□□□□□ -1.14
BDNF-211ENST00000439476 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.14
BDNF-211ENST00000439476 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 PDCL3Q9H2J4 239 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 SMC4Q9NTJ3 1288 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 TOPBP1Q92547 1522 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 CLGNO14967 610 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 CHMP4CQ96CF2 233 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 JPH4Q96JJ6 628 aa7.9□□□□□ -1.15
BDNF-211ENST00000439476 DNMBPQ6XZF7 1577 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 CLSTN1O94985 981 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 WASHC2CQ9Y4E1 1318 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 MYCNP04198 464 aaPredicted RBP7.89□□□□□ -1.15
BDNF-211ENST00000439476 KIAA1211Q6ZU35 1233 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 SKAP1Q86WV1 359 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 CERS3Q8IU89 383 aa7.89□□□□□ -1.15
BDNF-211ENST00000439476 POLA1P09884 1462 aaPredicted RBP7.88□□□□□ -1.15
BDNF-211ENST00000439476 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 NBPF1Q3BBV0 1214 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 DAPK1P53355 1430 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 HMMRO75330 724 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 DDX11L8A8MPP1 907 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 KIF21AQ7Z4S6 1674 aa7.88□□□□□ -1.15
BDNF-211ENST00000439476 RTF1Q92541 710 aaKnown RBP7.88□□□□□ -1.15
BDNF-211ENST00000439476 CHRM1P11229 460 aaPredicted RBP7.87□□□□□ -1.15
BDNF-211ENST00000439476 EFCAB2Q5VUJ9 269 aa7.87□□□□□ -1.15
BDNF-211ENST00000439476 PANK1Q8TE04 598 aa7.87□□□□□ -1.15
BDNF-211ENST00000439476 FOXD4L1Q9NU39 408 aa7.87□□□□□ -1.15
BDNF-211ENST00000439476 RPRD2Q5VT52 1461 aaKnown RBP7.87□□□□□ -1.15
BDNF-211ENST00000439476 ROCK1Q13464 1354 aa7.87□□□□□ -1.15
BDNF-211ENST00000439476 PHF14O94880 888 aa7.87□□□□□ -1.15
BDNF-211ENST00000439476 SAFB2Q14151 953 aaKnown RBP eCLIP7.87□□□□□ -1.15
BDNF-211ENST00000439476 PPP2R1AP30153 589 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 RGS22Q8NE09 1264 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 CHMP5Q9NZZ3 219 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 TPM4P67936 248 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
BDNF-211ENST00000439476 URB2Q14146 1524 aaKnown RBP7.86□□□□□ -1.15
BDNF-211ENST00000439476 ZKSCAN2Q63HK3 967 aa7.86□□□□□ -1.15
BDNF-211ENST00000439476 KIF3AQ9Y496 699 aa7.85□□□□□ -1.15
BDNF-211ENST00000439476 C20orf194Q5TEA3 1177 aa7.85□□□□□ -1.15
BDNF-211ENST00000439476 GPATCH3Q96I76 525 aa7.85□□□□□ -1.15
BDNF-211ENST00000439476 TERF2IPQ9NYB0 399 aa7.85□□□□□ -1.15
BDNF-211ENST00000439476 EPRSP07814 1512 aaKnown RBP7.84□□□□□ -1.15
BDNF-211ENST00000439476 BCAR3O75815 825 aa7.84□□□□□ -1.15
BDNF-211ENST00000439476 SKOR2Q2VWA4 1001 aaPredicted RBP7.84□□□□□ -1.15
BDNF-211ENST00000439476 ABCA10Q8WWZ4 1543 aa7.84□□□□□ -1.15
BDNF-211ENST00000439476 HECW1Q76N89 1606 aa7.84□□□□□ -1.15
BDNF-211ENST00000439476 TMEM51Q9NW97 253 aa7.84□□□□□ -1.15
BDNF-211ENST00000439476 CDK13Q14004 1512 aaKnown RBP7.84□□□□□ -1.15
BDNF-211ENST00000439476 ZBTB7CA1YPR0 619 aa7.84□□□□□ -1.16
BDNF-211ENST00000439476 KIF3BO15066 747 aa7.84□□□□□ -1.16
BDNF-211ENST00000439476 SPAG9O60271 1321 aaKnown RBP7.84□□□□□ -1.16
BDNF-211ENST00000439476 PPP4R3BQ5MIZ7 849 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 C22orf23Q9BZE7 217 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 APBB1O00213 710 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 DRC7Q8IY82 874 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 PDE3AQ14432 1141 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 ABCC5O15440 1437 aa7.83□□□□□ -1.16
BDNF-211ENST00000439476 DZIP1LQ8IYY4 767 aaKnown RBP7.82□□□□□ -1.16
BDNF-211ENST00000439476 RRAGDQ9NQL2 400 aaPredicted RBP7.82□□□□□ -1.16
BDNF-211ENST00000439476 PRG4Q92954 1404 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms