RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
TSC2-206ENST00000439117 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
TSC2-206ENST00000439117 GPS2Q13227 327 aa18.49■□□□□ 0.55
TSC2-206ENST00000439117 TPM2P07951 284 aa18.49■□□□□ 0.55
TSC2-206ENST00000439117 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
TSC2-206ENST00000439117 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 APBB1O00213 710 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 EXOC6Q8TAG9 804 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 MRE11P49959 708 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 CCDC34Q96HJ3 373 aa18.48■□□□□ 0.55
TSC2-206ENST00000439117 GNL2Q13823 731 aaKnown RBP18.47■□□□□ 0.55
TSC2-206ENST00000439117 RRP7AQ9Y3A4 280 aaKnown RBP18.46■□□□□ 0.55
TSC2-206ENST00000439117 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
TSC2-206ENST00000439117 TEX35Q5T0J7 233 aa18.46■□□□□ 0.54
TSC2-206ENST00000439117 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
TSC2-206ENST00000439117 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
TSC2-206ENST00000439117 HDAC5Q9UQL6 1122 aa18.44■□□□□ 0.54
TSC2-206ENST00000439117 ATP6V1DQ9Y5K8 247 aa18.44■□□□□ 0.54
TSC2-206ENST00000439117 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
TSC2-206ENST00000439117 HMMRO75330 724 aa18.43■□□□□ 0.54
TSC2-206ENST00000439117 SCAPERQ9BY12 1400 aa18.42■□□□□ 0.54
TSC2-206ENST00000439117 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
TSC2-206ENST00000439117 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
TSC2-206ENST00000439117 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
TSC2-206ENST00000439117 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
TSC2-206ENST00000439117 TPM3P06753 285 aa18.41■□□□□ 0.54
TSC2-206ENST00000439117 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
TSC2-206ENST00000439117 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
TSC2-206ENST00000439117 TMEM132EQ6IEE7 984 aa18.4■□□□□ 0.54
TSC2-206ENST00000439117 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
TSC2-206ENST00000439117 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
TSC2-206ENST00000439117 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
TSC2-206ENST00000439117 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
TSC2-206ENST00000439117 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
TSC2-206ENST00000439117 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 E9PSI1 815 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 PSME1Q06323 249 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
TSC2-206ENST00000439117 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
TSC2-206ENST00000439117 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
TSC2-206ENST00000439117 TULP1O00294 542 aaPredicted RBP18.37■□□□□ 0.53
TSC2-206ENST00000439117 APAF1O14727 1248 aa18.37■□□□□ 0.53
TSC2-206ENST00000439117 CCDC66A2RUB6 948 aa18.36■□□□□ 0.53
TSC2-206ENST00000439117 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
TSC2-206ENST00000439117 KIAA1107Q9UPP5 1409 aa18.35■□□□□ 0.53
TSC2-206ENST00000439117 RAPGEF3O95398 923 aa18.35■□□□□ 0.53
TSC2-206ENST00000439117 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
TSC2-206ENST00000439117 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
TSC2-206ENST00000439117 R3HCC1Q9Y3T6 440 aaKnown RBP18.35■□□□□ 0.53
TSC2-206ENST00000439117 BECN2A8MW95 431 aa18.34■□□□□ 0.53
TSC2-206ENST00000439117 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
TSC2-206ENST00000439117 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
TSC2-206ENST00000439117 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
TSC2-206ENST00000439117 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
TSC2-206ENST00000439117 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.53
TSC2-206ENST00000439117 DAPK1P53355 1430 aa18.33■□□□□ 0.53
TSC2-206ENST00000439117 TEFQ10587 303 aa18.33■□□□□ 0.52
TSC2-206ENST00000439117 NUCB2P80303 420 aa18.33■□□□□ 0.52
TSC2-206ENST00000439117 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 PLIN1O60240 522 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 CUL7Q14999 1698 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 GRIN2AQ12879 1464 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 EVA1CP58658 441 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
TSC2-206ENST00000439117 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
TSC2-206ENST00000439117 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
TSC2-206ENST00000439117 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
TSC2-206ENST00000439117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.524e-9■■■■■ 33.2
TSC2-206ENST00000439117 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
TSC2-206ENST00000439117 CCDC39Q9UFE4 941 aa18.31■□□□□ 0.52
TSC2-206ENST00000439117 NASPP49321 788 aaPredicted RBP18.31■□□□□ 0.52
TSC2-206ENST00000439117 ZNF592Q92610 1267 aa18.31■□□□□ 0.52
TSC2-206ENST00000439117 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
TSC2-206ENST00000439117 TAF7LQ5H9L4 462 aa18.31■□□□□ 0.52
TSC2-206ENST00000439117 HMGN5P82970 282 aaKnown RBP18.3■□□□□ 0.52
TSC2-206ENST00000439117 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
TSC2-206ENST00000439117 ARGLU1Q9NWB6 273 aaPredicted RBP18.3■□□□□ 0.52
TSC2-206ENST00000439117 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
TSC2-206ENST00000439117 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
TSC2-206ENST00000439117 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
TSC2-206ENST00000439117 ATF3P18847 181 aa18.29■□□□□ 0.52
TSC2-206ENST00000439117 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
TSC2-206ENST00000439117 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
TSC2-206ENST00000439117 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
TSC2-206ENST00000439117 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
TSC2-206ENST00000439117 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
TSC2-206ENST00000439117 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
TSC2-206ENST00000439117 SF3A1Q15459 793 aaKnown RBP18.28■□□□□ 0.52
TSC2-206ENST00000439117 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
TSC2-206ENST00000439117 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.52
TSC2-206ENST00000439117 RIPK4P57078 832 aa18.27■□□□□ 0.52
TSC2-206ENST00000439117 CHMP4CQ96CF2 233 aa18.27■□□□□ 0.52
TSC2-206ENST00000439117 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
TSC2-206ENST00000439117 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms