RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
LSMEM1-202ENST00000439068 SOCS7O14512 581 aa14.24□□□□□ -0.13
LSMEM1-202ENST00000439068 PELP1Q8IZL8 1130 aaKnown RBP14.24□□□□□ -0.13
LSMEM1-202ENST00000439068 CAMK2BQ13554 666 aa14.23□□□□□ -0.13
LSMEM1-202ENST00000439068 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
LSMEM1-202ENST00000439068 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
LSMEM1-202ENST00000439068 TROQ12816 1431 aaPredicted RBP14.23□□□□□ -0.13
LSMEM1-202ENST00000439068 PREX1Q8TCU6 1659 aa14.22□□□□□ -0.13
LSMEM1-202ENST00000439068 TESPA1A2RU30 521 aaPredicted RBP14.21□□□□□ -0.13
LSMEM1-202ENST00000439068 IER5LQ5T953 404 aa14.21□□□□□ -0.13
LSMEM1-202ENST00000439068 PTPRTO14522 1441 aa14.21□□□□□ -0.13
LSMEM1-202ENST00000439068 DSG2Q14126 1118 aa14.2□□□□□ -0.14
LSMEM1-202ENST00000439068 TRAPPC8Q9Y2L5 1435 aa14.2□□□□□ -0.14
LSMEM1-202ENST00000439068 SIGLEC1Q9BZZ2 1709 aa14.2□□□□□ -0.14
LSMEM1-202ENST00000439068 MYO5CQ9NQX4 1742 aa14.2□□□□□ -0.14
LSMEM1-202ENST00000439068 ILDR2Q71H61 639 aa14.19□□□□□ -0.14
LSMEM1-202ENST00000439068 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
LSMEM1-202ENST00000439068 KIF14Q15058 1648 aa14.19□□□□□ -0.14
LSMEM1-202ENST00000439068 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
LSMEM1-202ENST00000439068 CNTLNQ9NXG0 1405 aa14.17□□□□□ -0.14
LSMEM1-202ENST00000439068 PLCG2P16885 1265 aa14.17□□□□□ -0.14
LSMEM1-202ENST00000439068 POTEHQ6S545 545 aa14.17□□□□□ -0.14
LSMEM1-202ENST00000439068 TMEM121BQ9BXQ6 578 aaPredicted RBP14.17□□□□□ -0.14
LSMEM1-202ENST00000439068 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
LSMEM1-202ENST00000439068 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
LSMEM1-202ENST00000439068 ARIH1Q9Y4X5 557 aaPredicted RBP14.16□□□□□ -0.14
LSMEM1-202ENST00000439068 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
LSMEM1-202ENST00000439068 KDM5CP41229 1560 aa14.15□□□□□ -0.14
LSMEM1-202ENST00000439068 TMC2Q8TDI7 906 aa14.15□□□□□ -0.14
LSMEM1-202ENST00000439068 DCBLD2Q96PD2 775 aa14.15□□□□□ -0.14
LSMEM1-202ENST00000439068 EMILIN3Q9NT22 766 aa14.15□□□□□ -0.14
LSMEM1-202ENST00000439068 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 C2orf72A6NCS6 295 aa14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 TULP1O00294 542 aaPredicted RBP14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 AGLP35573 1532 aa14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 STRCQ7RTU9 1775 aa14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
LSMEM1-202ENST00000439068 ZMYM3Q14202 1370 aa14.11□□□□□ -0.15
LSMEM1-202ENST00000439068 UBAP1LF5GYI3 381 aa14.11□□□□□ -0.15
LSMEM1-202ENST00000439068 DPYSL4O14531 572 aa14.11□□□□□ -0.15
LSMEM1-202ENST00000439068 DIP2CQ9Y2E4 1556 aa14.11□□□□□ -0.15
LSMEM1-202ENST00000439068 IQSEC2Q5JU85 1478 aa14.11□□□□□ -0.15
LSMEM1-202ENST00000439068 G3V3G9 751 aa14.1□□□□□ -0.15
LSMEM1-202ENST00000439068 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
LSMEM1-202ENST00000439068 NPATQ14207 1427 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 NCOA1Q15788 1441 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 SEC24BO95487 1268 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 FOXK1P85037 733 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 PLPP6Q8IY26 295 aa14.09□□□□□ -0.15
LSMEM1-202ENST00000439068 MLLT3P42568 568 aaPredicted RBP14.08□□□□□ -0.16
LSMEM1-202ENST00000439068 GGT6Q6P531 493 aa14.08□□□□□ -0.16
LSMEM1-202ENST00000439068 TMEM92Q6UXU6 159 aa14.08□□□□□ -0.16
LSMEM1-202ENST00000439068 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
LSMEM1-202ENST00000439068 CFDP1Q9UEE9 299 aaPredicted RBP14.08□□□□□ -0.16
LSMEM1-202ENST00000439068 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
LSMEM1-202ENST00000439068 KIF3CO14782 793 aa14.07□□□□□ -0.16
LSMEM1-202ENST00000439068 C3P01024 1663 aa14.07□□□□□ -0.16
LSMEM1-202ENST00000439068 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
LSMEM1-202ENST00000439068 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
LSMEM1-202ENST00000439068 ABCC1P33527 1531 aa14.05□□□□□ -0.16
LSMEM1-202ENST00000439068 ABCA6Q8N139 1617 aa14.05□□□□□ -0.16
LSMEM1-202ENST00000439068 CDC42BPBQ9Y5S2 1711 aa14.05□□□□□ -0.16
LSMEM1-202ENST00000439068 LTBP4Q8N2S1 1624 aa14.04□□□□□ -0.16
LSMEM1-202ENST00000439068 ZNF335Q9H4Z2 1342 aaPredicted RBP14.03□□□□□ -0.16
LSMEM1-202ENST00000439068 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
LSMEM1-202ENST00000439068 CAMSAP1Q5T5Y3 1602 aa14.03□□□□□ -0.16
LSMEM1-202ENST00000439068 PREX2Q70Z35 1606 aa14.02□□□□□ -0.16
LSMEM1-202ENST00000439068 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
LSMEM1-202ENST00000439068 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
LSMEM1-202ENST00000439068 SLC39A7Q92504 469 aa14.02□□□□□ -0.17
LSMEM1-202ENST00000439068 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
LSMEM1-202ENST00000439068 TOM1O60784 492 aa14.01□□□□□ -0.17
LSMEM1-202ENST00000439068 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
LSMEM1-202ENST00000439068 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
LSMEM1-202ENST00000439068 RBM26Q5T8P6 1007 aaKnown RBP14□□□□□ -0.17
LSMEM1-202ENST00000439068 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
LSMEM1-202ENST00000439068 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
LSMEM1-202ENST00000439068 C7P10643 843 aa13.99□□□□□ -0.17
LSMEM1-202ENST00000439068 METRNQ9UJH8 293 aa13.99□□□□□ -0.17
LSMEM1-202ENST00000439068 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
LSMEM1-202ENST00000439068 A2MP01023 1474 aa13.99□□□□□ -0.17
LSMEM1-202ENST00000439068 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
LSMEM1-202ENST00000439068 FYCO1Q9BQS8 1478 aa13.98□□□□□ -0.17
LSMEM1-202ENST00000439068 MROH2AA6NES4 1674 aa13.98□□□□□ -0.17
LSMEM1-202ENST00000439068 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
LSMEM1-202ENST00000439068 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
LSMEM1-202ENST00000439068 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
LSMEM1-202ENST00000439068 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
LSMEM1-202ENST00000439068 PDIA6Q15084 440 aa13.96□□□□□ -0.17
LSMEM1-202ENST00000439068 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 CDC42BPAQ5VT25 1732 aa13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 SUPT6HQ7KZ85 1726 aaKnown RBP13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
LSMEM1-202ENST00000439068 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms