RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 KRTAP4-6Q9BYQ5 205 aa11.53□□□□□ -0.56
HMGN1P6-201ENST00000438508 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
HMGN1P6-201ENST00000438508 ZNF598Q86UK7 904 aaKnown RBP11.52□□□□□ -0.57
HMGN1P6-201ENST00000438508 EEA1Q15075 1411 aa11.52□□□□□ -0.57
HMGN1P6-201ENST00000438508 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
HMGN1P6-201ENST00000438508 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
HMGN1P6-201ENST00000438508 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
HMGN1P6-201ENST00000438508 SMAPO00193 183 aa11.49□□□□□ -0.57
HMGN1P6-201ENST00000438508 PRSS12P56730 875 aa11.49□□□□□ -0.57
HMGN1P6-201ENST00000438508 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
HMGN1P6-201ENST00000438508 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
HMGN1P6-201ENST00000438508 WIPF1O43516 503 aa11.48□□□□□ -0.57
HMGN1P6-201ENST00000438508 CERKQ8TCT0 537 aa11.48□□□□□ -0.57
HMGN1P6-201ENST00000438508 TATDN2Q93075 761 aa11.48□□□□□ -0.57
HMGN1P6-201ENST00000438508 FAM198AQ9UFP1 575 aa11.48□□□□□ -0.57
HMGN1P6-201ENST00000438508 ZPR1O75312 459 aa11.47□□□□□ -0.57
HMGN1P6-201ENST00000438508 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
HMGN1P6-201ENST00000438508 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
HMGN1P6-201ENST00000438508 RNF223E7ERA6 249 aa11.46□□□□□ -0.57
HMGN1P6-201ENST00000438508 HDGFP51858 240 aaKnown RBP11.46□□□□□ -0.57
HMGN1P6-201ENST00000438508 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.57
HMGN1P6-201ENST00000438508 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
HMGN1P6-201ENST00000438508 WFS1O76024 890 aa11.45□□□□□ -0.58
HMGN1P6-201ENST00000438508 DDX12PQ92771 950 aa11.45□□□□□ -0.58
HMGN1P6-201ENST00000438508 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
HMGN1P6-201ENST00000438508 SOGA1O94964 1423 aa11.44□□□□□ -0.58
HMGN1P6-201ENST00000438508 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
HMGN1P6-201ENST00000438508 GDF9O60383 454 aa11.44□□□□□ -0.58
HMGN1P6-201ENST00000438508 DPYSL4O14531 572 aa11.43□□□□□ -0.58
HMGN1P6-201ENST00000438508 MAP3K7O43318 606 aa11.43□□□□□ -0.58
HMGN1P6-201ENST00000438508 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P6-201ENST00000438508 LAMC3Q9Y6N6 1575 aa11.42□□□□□ -0.58
HMGN1P6-201ENST00000438508 FAM187AA6NFU0 413 aa11.42□□□□□ -0.58
HMGN1P6-201ENST00000438508 COPS2P61201 443 aa11.42□□□□□ -0.58
HMGN1P6-201ENST00000438508 CUX1P39880 1505 aa11.41□□□□□ -0.58
HMGN1P6-201ENST00000438508 CRIPAKQ8N1N5 446 aa11.41□□□□□ -0.58
HMGN1P6-201ENST00000438508 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
HMGN1P6-201ENST00000438508 PNMA3Q9UL41 463 aa11.41□□□□□ -0.58
HMGN1P6-201ENST00000438508 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.59
HMGN1P6-201ENST00000438508 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
HMGN1P6-201ENST00000438508 NBR1Q14596 966 aa11.39□□□□□ -0.59
HMGN1P6-201ENST00000438508 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
HMGN1P6-201ENST00000438508 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
HMGN1P6-201ENST00000438508 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
HMGN1P6-201ENST00000438508 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
HMGN1P6-201ENST00000438508 RNF40O75150 1001 aa11.36□□□□□ -0.59
HMGN1P6-201ENST00000438508 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
HMGN1P6-201ENST00000438508 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
HMGN1P6-201ENST00000438508 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
HMGN1P6-201ENST00000438508 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
HMGN1P6-201ENST00000438508 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
HMGN1P6-201ENST00000438508 NESP48681 1621 aa11.34□□□□□ -0.59
HMGN1P6-201ENST00000438508 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
HMGN1P6-201ENST00000438508 PDS5BQ9NTI5 1447 aa11.33□□□□□ -0.6
HMGN1P6-201ENST00000438508 KIF21BO75037 1637 aa11.32□□□□□ -0.6
HMGN1P6-201ENST00000438508 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
HMGN1P6-201ENST00000438508 PDIA6Q15084 440 aa11.32□□□□□ -0.6
HMGN1P6-201ENST00000438508 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
HMGN1P6-201ENST00000438508 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
HMGN1P6-201ENST00000438508 AVPP01185 164 aa11.3□□□□□ -0.6
HMGN1P6-201ENST00000438508 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
HMGN1P6-201ENST00000438508 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
HMGN1P6-201ENST00000438508 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
HMGN1P6-201ENST00000438508 GOLGA3Q08378 1498 aa11.29□□□□□ -0.6
HMGN1P6-201ENST00000438508 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
HMGN1P6-201ENST00000438508 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
HMGN1P6-201ENST00000438508 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
HMGN1P6-201ENST00000438508 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
HMGN1P6-201ENST00000438508 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
HMGN1P6-201ENST00000438508 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
HMGN1P6-201ENST00000438508 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
HMGN1P6-201ENST00000438508 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
HMGN1P6-201ENST00000438508 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
HMGN1P6-201ENST00000438508 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P6-201ENST00000438508 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 PKD2L1Q9P0L9 805 aa11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
HMGN1P6-201ENST00000438508 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P6-201ENST00000438508 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
HMGN1P6-201ENST00000438508 S1PR4O95977 384 aa11.22□□□□□ -0.61
HMGN1P6-201ENST00000438508 IGF1RP08069 1367 aa11.22□□□□□ -0.61
HMGN1P6-201ENST00000438508 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
HMGN1P6-201ENST00000438508 KIF21AQ7Z4S6 1674 aa11.22□□□□□ -0.61
HMGN1P6-201ENST00000438508 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
HMGN1P6-201ENST00000438508 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.61
HMGN1P6-201ENST00000438508 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
HMGN1P6-201ENST00000438508 CUX2O14529 1486 aa11.2□□□□□ -0.62
HMGN1P6-201ENST00000438508 AXIN1O15169 862 aa11.2□□□□□ -0.62
HMGN1P6-201ENST00000438508 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
HMGN1P6-201ENST00000438508 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
HMGN1P6-201ENST00000438508 TLL1O43897 1013 aa11.19□□□□□ -0.62
HMGN1P6-201ENST00000438508 TOR4AQ9NXH8 423 aa11.19□□□□□ -0.62
HMGN1P6-201ENST00000438508 EYA1Q99502 592 aa11.18□□□□□ -0.62
HMGN1P6-201ENST00000438508 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
HMGN1P6-201ENST00000438508 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
HMGN1P6-201ENST00000438508 TERTO14746 1132 aaKnown RBP11.16□□□□□ -0.62
HMGN1P6-201ENST00000438508 ADH1BP00325 375 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms