RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 USP21Q9UK80 565 aa18.89■□□□□ 0.61
RTN4-211ENST00000438462 ATRNO75882 1429 aa18.89■□□□□ 0.61
RTN4-211ENST00000438462 PNPLA6Q8IY17 1366 aa18.88■□□□□ 0.61
RTN4-211ENST00000438462 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
RTN4-211ENST00000438462 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
RTN4-211ENST00000438462 CEP152O94986 1710 aa18.88■□□□□ 0.61
RTN4-211ENST00000438462 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
RTN4-211ENST00000438462 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
RTN4-211ENST00000438462 BRINP3Q76B58 766 aa18.87■□□□□ 0.61
RTN4-211ENST00000438462 MROH1Q8NDA8 1641 aa18.87■□□□□ 0.61
RTN4-211ENST00000438462 ARHGAP35Q9NRY4 1499 aa18.86■□□□□ 0.61
RTN4-211ENST00000438462 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
RTN4-211ENST00000438462 UNC13BO14795 1591 aa18.85■□□□□ 0.61
RTN4-211ENST00000438462 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
RTN4-211ENST00000438462 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
RTN4-211ENST00000438462 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
RTN4-211ENST00000438462 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
RTN4-211ENST00000438462 EFCAB6Q5THR3 1501 aa18.82■□□□□ 0.6
RTN4-211ENST00000438462 NCOA3Q9Y6Q9 1424 aa18.82■□□□□ 0.6
RTN4-211ENST00000438462 ATF3P18847 181 aa18.8■□□□□ 0.6
RTN4-211ENST00000438462 LRRC59Q96AG4 307 aaKnown RBP18.79■□□□□ 0.6
RTN4-211ENST00000438462 SPHKAPQ2M3C7 1700 aa18.78■□□□□ 0.6
RTN4-211ENST00000438462 C1QTNF8P60827 252 aa18.78■□□□□ 0.6
RTN4-211ENST00000438462 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
RTN4-211ENST00000438462 ZNF784Q8NCA9 323 aaPredicted RBP18.77■□□□□ 0.6
RTN4-211ENST00000438462 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
RTN4-211ENST00000438462 CCNB3Q8WWL7 1395 aa18.76■□□□□ 0.59
RTN4-211ENST00000438462 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
RTN4-211ENST00000438462 C19orf44Q9H6X5 657 aa18.74■□□□□ 0.59
RTN4-211ENST00000438462 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
RTN4-211ENST00000438462 CCDC141Q6ZP82 1450 aa18.72■□□□□ 0.59
RTN4-211ENST00000438462 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
RTN4-211ENST00000438462 BCANQ96GW7 911 aa18.72■□□□□ 0.59
RTN4-211ENST00000438462 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
RTN4-211ENST00000438462 PTCH1Q13635 1447 aa18.71■□□□□ 0.59
RTN4-211ENST00000438462 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
RTN4-211ENST00000438462 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
RTN4-211ENST00000438462 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
RTN4-211ENST00000438462 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
RTN4-211ENST00000438462 GLI3P10071 1580 aa18.69■□□□□ 0.58
RTN4-211ENST00000438462 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
RTN4-211ENST00000438462 MST1RQ04912 1400 aa18.67■□□□□ 0.58
RTN4-211ENST00000438462 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
RTN4-211ENST00000438462 GJD4Q96KN9 370 aaPredicted RBP18.67■□□□□ 0.58
RTN4-211ENST00000438462 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.66■□□□□ 0.58
RTN4-211ENST00000438462 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
RTN4-211ENST00000438462 BAG6P46379 1132 aa18.66■□□□□ 0.58
RTN4-211ENST00000438462 DCCP43146 1447 aa18.66■□□□□ 0.58
RTN4-211ENST00000438462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
RTN4-211ENST00000438462 MARF1Q9Y4F3 1742 aaKnown RBP18.65■□□□□ 0.58
RTN4-211ENST00000438462 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
RTN4-211ENST00000438462 RALGAPBQ86X10 1494 aa18.63■□□□□ 0.57
RTN4-211ENST00000438462 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
RTN4-211ENST00000438462 EEA1Q15075 1411 aa18.61■□□□□ 0.57
RTN4-211ENST00000438462 PLEKHG1Q9ULL1 1385 aa18.61■□□□□ 0.57
RTN4-211ENST00000438462 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.56
RTN4-211ENST00000438462 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
RTN4-211ENST00000438462 NINLQ9Y2I6 1382 aa18.57■□□□□ 0.56
RTN4-211ENST00000438462 LAMC1P11047 1609 aa18.57■□□□□ 0.56
RTN4-211ENST00000438462 IDI1Q13907 227 aa18.57■□□□□ 0.56
RTN4-211ENST00000438462 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
RTN4-211ENST00000438462 ZFYVE9O95405 1425 aa18.55■□□□□ 0.56
RTN4-211ENST00000438462 TRPM2O94759 1503 aa18.54■□□□□ 0.56
RTN4-211ENST00000438462 MYO5BQ9ULV0 1848 aa18.54■□□□□ 0.56
RTN4-211ENST00000438462 MYOM2P54296 1465 aa18.54■□□□□ 0.56
RTN4-211ENST00000438462 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
RTN4-211ENST00000438462 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
RTN4-211ENST00000438462 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
RTN4-211ENST00000438462 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.56
RTN4-211ENST00000438462 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
RTN4-211ENST00000438462 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
RTN4-211ENST00000438462 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
RTN4-211ENST00000438462 UTRNP46939 3433 aa18.5■□□□□ 0.55
RTN4-211ENST00000438462 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
RTN4-211ENST00000438462 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
RTN4-211ENST00000438462 CHD4Q14839 1912 aa18.49■□□□□ 0.55
RTN4-211ENST00000438462 KRT27Q7Z3Y8 459 aa18.49■□□□□ 0.55
RTN4-211ENST00000438462 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
RTN4-211ENST00000438462 PIK3R4Q99570 1358 aa18.47■□□□□ 0.55
RTN4-211ENST00000438462 RIMS2Q9UQ26 1411 aa18.47■□□□□ 0.55
RTN4-211ENST00000438462 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
RTN4-211ENST00000438462 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
RTN4-211ENST00000438462 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
RTN4-211ENST00000438462 PTPRUQ92729 1446 aa18.46■□□□□ 0.55
RTN4-211ENST00000438462 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
RTN4-211ENST00000438462 XRN1Q8IZH2 1706 aaKnown RBP18.46■□□□□ 0.55
RTN4-211ENST00000438462 GIGYF1O75420 1035 aaPredicted RBP18.45■□□□□ 0.54
RTN4-211ENST00000438462 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
RTN4-211ENST00000438462 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
RTN4-211ENST00000438462 SLIT2O94813 1529 aa18.44■□□□□ 0.54
RTN4-211ENST00000438462 SLC34A2O95436 690 aa18.44■□□□□ 0.54
RTN4-211ENST00000438462 TSPY4P0CV99 314 aa18.42■□□□□ 0.54
RTN4-211ENST00000438462 TSPY10P0CW01 314 aa18.42■□□□□ 0.54
RTN4-211ENST00000438462 EZH2Q15910 746 aaKnown RBP18.42■□□□□ 0.54
RTN4-211ENST00000438462 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
RTN4-211ENST00000438462 C1orf167Q5SNV9 1468 aa18.41■□□□□ 0.54
RTN4-211ENST00000438462 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
RTN4-211ENST00000438462 NOS1P29475 1434 aa18.4■□□□□ 0.54
RTN4-211ENST00000438462 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
RTN4-211ENST00000438462 SPON1Q9HCB6 807 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms