RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 MYO5BQ9ULV0 1848 aa20.4■□□□□ 0.86
LINC01007-202ENST00000437900 UBR1Q8IWV7 1749 aa20.39■□□□□ 0.86
LINC01007-202ENST00000437900 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
LINC01007-202ENST00000437900 TRPM1Q7Z4N2 1603 aa20.38■□□□□ 0.85
LINC01007-202ENST00000437900 SETD1BQ9UPS6 1966 aaKnown RBP20.38■□□□□ 0.85
LINC01007-202ENST00000437900 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
LINC01007-202ENST00000437900 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
LINC01007-202ENST00000437900 PIK3C2GO75747 1445 aa20.37■□□□□ 0.85
LINC01007-202ENST00000437900 ADGRF5Q8IZF2 1346 aa20.36■□□□□ 0.85
LINC01007-202ENST00000437900 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
LINC01007-202ENST00000437900 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
LINC01007-202ENST00000437900 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
LINC01007-202ENST00000437900 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
LINC01007-202ENST00000437900 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
LINC01007-202ENST00000437900 LAMC1P11047 1609 aa20.33■□□□□ 0.85
LINC01007-202ENST00000437900 SLIT1O75093 1534 aa20.33■□□□□ 0.84
LINC01007-202ENST00000437900 ARHGAP23Q9P227 1491 aa20.32■□□□□ 0.84
LINC01007-202ENST00000437900 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC01007-202ENST00000437900 KDM4FA0A1W2PPD8 638 aa20.31■□□□□ 0.84
LINC01007-202ENST00000437900 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
LINC01007-202ENST00000437900 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
LINC01007-202ENST00000437900 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
LINC01007-202ENST00000437900 THEMISQ8N1K5 641 aaPredicted RBP20.3■□□□□ 0.84
LINC01007-202ENST00000437900 C14orf93Q9H972 538 aaKnown RBP20.29■□□□□ 0.84
LINC01007-202ENST00000437900 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
LINC01007-202ENST00000437900 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
LINC01007-202ENST00000437900 NBPF1Q3BBV0 1214 aa20.27■□□□□ 0.84
LINC01007-202ENST00000437900 ZNF316A6NFI3 1004 aaPredicted RBP20.26■□□□□ 0.83
LINC01007-202ENST00000437900 CARD11Q9BXL7 1154 aa20.26■□□□□ 0.83
LINC01007-202ENST00000437900 USP47Q96K76 1375 aa20.25■□□□□ 0.83
LINC01007-202ENST00000437900 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
LINC01007-202ENST00000437900 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
LINC01007-202ENST00000437900 NUTM2DQ5VT03 806 aaPredicted RBP20.24■□□□□ 0.83
LINC01007-202ENST00000437900 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
LINC01007-202ENST00000437900 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
LINC01007-202ENST00000437900 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
LINC01007-202ENST00000437900 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
LINC01007-202ENST00000437900 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
LINC01007-202ENST00000437900 LTKP29376 864 aa20.2■□□□□ 0.82
LINC01007-202ENST00000437900 IQGAP1P46940 1657 aa20.2■□□□□ 0.82
LINC01007-202ENST00000437900 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
LINC01007-202ENST00000437900 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
LINC01007-202ENST00000437900 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
LINC01007-202ENST00000437900 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
LINC01007-202ENST00000437900 MED14O60244 1454 aa20.15■□□□□ 0.82
LINC01007-202ENST00000437900 EIF3AQ14152 1382 aaKnown RBP20.15■□□□□ 0.82
LINC01007-202ENST00000437900 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
LINC01007-202ENST00000437900 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
LINC01007-202ENST00000437900 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
LINC01007-202ENST00000437900 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
LINC01007-202ENST00000437900 TMEM132EQ6IEE7 984 aa20.11■□□□□ 0.81
LINC01007-202ENST00000437900 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
LINC01007-202ENST00000437900 YTHDC2Q9H6S0 1430 aaKnown RBP20.1■□□□□ 0.81
LINC01007-202ENST00000437900 LMTK3Q96Q04 1460 aa20.1■□□□□ 0.81
LINC01007-202ENST00000437900 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
LINC01007-202ENST00000437900 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
LINC01007-202ENST00000437900 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
LINC01007-202ENST00000437900 TESK2Q96S53 571 aa20.08■□□□□ 0.81
LINC01007-202ENST00000437900 METP08581 1390 aa20.08■□□□□ 0.8
LINC01007-202ENST00000437900 DLC1Q96QB1 1528 aa20.08■□□□□ 0.8
LINC01007-202ENST00000437900 ABCC11Q96J66 1382 aa20.07■□□□□ 0.8
LINC01007-202ENST00000437900 TECPR2O15040 1411 aa20.07■□□□□ 0.8
LINC01007-202ENST00000437900 POLR1AO95602 1720 aaPredicted RBP20.06■□□□□ 0.8
LINC01007-202ENST00000437900 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
LINC01007-202ENST00000437900 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
LINC01007-202ENST00000437900 SLC24A1O60721 1099 aa20.05■□□□□ 0.8
LINC01007-202ENST00000437900 BCANQ96GW7 911 aa20.05■□□□□ 0.8
LINC01007-202ENST00000437900 NPHP4O75161 1426 aaPredicted RBP20.04■□□□□ 0.8
LINC01007-202ENST00000437900 TRAK1Q9UPV9 953 aa20.04■□□□□ 0.8
LINC01007-202ENST00000437900 KNDC1Q76NI1 1749 aa20.03■□□□□ 0.8
LINC01007-202ENST00000437900 CENPJQ9HC77 1338 aaPredicted RBP20.03■□□□□ 0.8
LINC01007-202ENST00000437900 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
LINC01007-202ENST00000437900 CCDC7Q96M83 1385 aa20.02■□□□□ 0.8
LINC01007-202ENST00000437900 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
LINC01007-202ENST00000437900 C11orf95C9JLR9 678 aaPredicted RBP20.02■□□□□ 0.8
LINC01007-202ENST00000437900 SIRT1Q96EB6 747 aa20.02■□□□□ 0.8
LINC01007-202ENST00000437900 CPS1P31327 1500 aa20.01■□□□□ 0.79
LINC01007-202ENST00000437900 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
LINC01007-202ENST00000437900 FAM135BQ49AJ0 1406 aa20.01■□□□□ 0.79
LINC01007-202ENST00000437900 KIF7Q2M1P5 1343 aa20■□□□□ 0.79
LINC01007-202ENST00000437900 STK26Q9P289 416 aa19.99■□□□□ 0.79
LINC01007-202ENST00000437900 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
LINC01007-202ENST00000437900 PTPRUQ92729 1446 aa19.98■□□□□ 0.79
LINC01007-202ENST00000437900 TMF1P82094 1093 aa19.98■□□□□ 0.79
LINC01007-202ENST00000437900 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
LINC01007-202ENST00000437900 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
LINC01007-202ENST00000437900 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
LINC01007-202ENST00000437900 XRN1Q8IZH2 1706 aaKnown RBP19.97■□□□□ 0.79
LINC01007-202ENST00000437900 HSPA2P54652 639 aa19.96■□□□□ 0.79
LINC01007-202ENST00000437900 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
LINC01007-202ENST00000437900 CDCA8Q53HL2 280 aa19.94■□□□□ 0.78
LINC01007-202ENST00000437900 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
LINC01007-202ENST00000437900 POGKQ9P215 609 aa19.92■□□□□ 0.78
LINC01007-202ENST00000437900 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
LINC01007-202ENST00000437900 CHD2O14647 1828 aaKnown RBP19.92■□□□□ 0.78
LINC01007-202ENST00000437900 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
LINC01007-202ENST00000437900 DIEXFQ68CQ4 756 aaKnown RBP19.91■□□□□ 0.78
LINC01007-202ENST00000437900 STRCQ7RTU9 1775 aa19.91■□□□□ 0.78
LINC01007-202ENST00000437900 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
LINC01007-202ENST00000437900 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms