RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
HLA-DPA1-243ENST00000437811 NRXN1Q9ULB1 1477 aa19.15■□□□□ 0.66
HLA-DPA1-243ENST00000437811 USP47Q96K76 1375 aa19.15■□□□□ 0.66
HLA-DPA1-243ENST00000437811 CHGAP10645 457 aaKnown RBP19.15■□□□□ 0.66
HLA-DPA1-243ENST00000437811 IDI1Q13907 227 aa19.15■□□□□ 0.66
HLA-DPA1-243ENST00000437811 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
HLA-DPA1-243ENST00000437811 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
HLA-DPA1-243ENST00000437811 MYO5BQ9ULV0 1848 aa19.13■□□□□ 0.65
HLA-DPA1-243ENST00000437811 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
HLA-DPA1-243ENST00000437811 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
HLA-DPA1-243ENST00000437811 C3P01024 1663 aa19.09■□□□□ 0.65
HLA-DPA1-243ENST00000437811 ADGRF5Q8IZF2 1346 aa19.09■□□□□ 0.65
HLA-DPA1-243ENST00000437811 NBPF1Q3BBV0 1214 aa19.08■□□□□ 0.65
HLA-DPA1-243ENST00000437811 TNRQ92752 1358 aa19.08■□□□□ 0.64
HLA-DPA1-243ENST00000437811 IQGAP1P46940 1657 aa19.08■□□□□ 0.64
HLA-DPA1-243ENST00000437811 PIK3C2GO75747 1445 aa19.07■□□□□ 0.64
HLA-DPA1-243ENST00000437811 ZFYVE9O95405 1425 aa19.06■□□□□ 0.64
HLA-DPA1-243ENST00000437811 A2ML1A8K2U0 1454 aa19.05■□□□□ 0.64
HLA-DPA1-243ENST00000437811 KDM5AP29375 1690 aaKnown RBP19.05■□□□□ 0.64
HLA-DPA1-243ENST00000437811 SETBP1Q9Y6X0 1596 aa19.04■□□□□ 0.64
HLA-DPA1-243ENST00000437811 ADAMTSL3P82987 1691 aa19.03■□□□□ 0.64
HLA-DPA1-243ENST00000437811 CCDC7Q96M83 1385 aa19.03■□□□□ 0.64
HLA-DPA1-243ENST00000437811 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.64
HLA-DPA1-243ENST00000437811 RIMS1Q86UR5 1692 aaKnown RBP19.02■□□□□ 0.63
HLA-DPA1-243ENST00000437811 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
HLA-DPA1-243ENST00000437811 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
HLA-DPA1-243ENST00000437811 NLRP1Q9C000 1473 aa19■□□□□ 0.63
HLA-DPA1-243ENST00000437811 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
HLA-DPA1-243ENST00000437811 CFAP70Q5T0N1 1121 aa19■□□□□ 0.63
HLA-DPA1-243ENST00000437811 STAG3Q9UJ98 1225 aa19■□□□□ 0.63
HLA-DPA1-243ENST00000437811 UBR1Q8IWV7 1749 aa19■□□□□ 0.63
HLA-DPA1-243ENST00000437811 ST20-MTHFSA0A0A6YYL1 179 aa18.99■□□□□ 0.63
HLA-DPA1-243ENST00000437811 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
HLA-DPA1-243ENST00000437811 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
HLA-DPA1-243ENST00000437811 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
HLA-DPA1-243ENST00000437811 CEBPAP49715 358 aaPredicted RBP18.97■□□□□ 0.63
HLA-DPA1-243ENST00000437811 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
HLA-DPA1-243ENST00000437811 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
HLA-DPA1-243ENST00000437811 MYO3AQ8NEV4 1616 aa18.95■□□□□ 0.62
HLA-DPA1-243ENST00000437811 NUTM2DQ5VT03 806 aaPredicted RBP18.94■□□□□ 0.62
HLA-DPA1-243ENST00000437811 EIF3AQ14152 1382 aaKnown RBP18.94■□□□□ 0.62
HLA-DPA1-243ENST00000437811 MIER1Q8N108 512 aa18.93■□□□□ 0.62
HLA-DPA1-243ENST00000437811 ASXL1Q8IXJ9 1541 aa18.92■□□□□ 0.62
HLA-DPA1-243ENST00000437811 TESK2Q96S53 571 aa18.92■□□□□ 0.62
HLA-DPA1-243ENST00000437811 ALKQ9UM73 1620 aa18.89■□□□□ 0.62
HLA-DPA1-243ENST00000437811 TMEM2Q9UHN6 1383 aa18.89■□□□□ 0.61
HLA-DPA1-243ENST00000437811 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.61
HLA-DPA1-243ENST00000437811 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
HLA-DPA1-243ENST00000437811 NRXN3Q9Y4C0 1643 aa18.88■□□□□ 0.61
HLA-DPA1-243ENST00000437811 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
HLA-DPA1-243ENST00000437811 CEP170BQ9Y4F5 1589 aaPredicted RBP18.86■□□□□ 0.61
HLA-DPA1-243ENST00000437811 SLIT1O75093 1534 aa18.86■□□□□ 0.61
HLA-DPA1-243ENST00000437811 ARHGAP23Q9P227 1491 aa18.86■□□□□ 0.61
HLA-DPA1-243ENST00000437811 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
HLA-DPA1-243ENST00000437811 ZNF142P52746 1687 aaPredicted RBP18.85■□□□□ 0.61
HLA-DPA1-243ENST00000437811 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
HLA-DPA1-243ENST00000437811 PTPRMP28827 1452 aa18.84■□□□□ 0.61
HLA-DPA1-243ENST00000437811 TMF1P82094 1093 aa18.84■□□□□ 0.61
HLA-DPA1-243ENST00000437811 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
HLA-DPA1-243ENST00000437811 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
HLA-DPA1-243ENST00000437811 QRICH2Q9H0J4 1663 aa18.84■□□□□ 0.61
HLA-DPA1-243ENST00000437811 POLR3GLQ9BT43 218 aa18.82■□□□□ 0.6
HLA-DPA1-243ENST00000437811 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
HLA-DPA1-243ENST00000437811 YTHDC2Q9H6S0 1430 aaKnown RBP18.81■□□□□ 0.6
HLA-DPA1-243ENST00000437811 TRAK1Q9UPV9 953 aa18.81■□□□□ 0.6
HLA-DPA1-243ENST00000437811 SLC24A1O60721 1099 aa18.8■□□□□ 0.6
HLA-DPA1-243ENST00000437811 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
HLA-DPA1-243ENST00000437811 ANP32CO43423 234 aa18.79■□□□□ 0.6
HLA-DPA1-243ENST00000437811 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
HLA-DPA1-243ENST00000437811 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
HLA-DPA1-243ENST00000437811 DLC1Q96QB1 1528 aa18.78■□□□□ 0.6
HLA-DPA1-243ENST00000437811 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
HLA-DPA1-243ENST00000437811 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
HLA-DPA1-243ENST00000437811 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
HLA-DPA1-243ENST00000437811 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
HLA-DPA1-243ENST00000437811 KNDC1Q76NI1 1749 aa18.76■□□□□ 0.59
HLA-DPA1-243ENST00000437811 LTKP29376 864 aa18.75■□□□□ 0.59
HLA-DPA1-243ENST00000437811 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
HLA-DPA1-243ENST00000437811 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
HLA-DPA1-243ENST00000437811 MYOM1P52179 1685 aa18.75■□□□□ 0.59
HLA-DPA1-243ENST00000437811 MED14O60244 1454 aa18.73■□□□□ 0.59
HLA-DPA1-243ENST00000437811 STK26Q9P289 416 aa18.72■□□□□ 0.59
HLA-DPA1-243ENST00000437811 DIP2AQ14689 1571 aa18.72■□□□□ 0.59
HLA-DPA1-243ENST00000437811 METP08581 1390 aa18.72■□□□□ 0.59
HLA-DPA1-243ENST00000437811 ABCC11Q96J66 1382 aa18.72■□□□□ 0.59
HLA-DPA1-243ENST00000437811 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
HLA-DPA1-243ENST00000437811 TECPR2O15040 1411 aa18.71■□□□□ 0.59
HLA-DPA1-243ENST00000437811 CPS1P31327 1500 aa18.71■□□□□ 0.59
HLA-DPA1-243ENST00000437811 BCANQ96GW7 911 aa18.69■□□□□ 0.58
HLA-DPA1-243ENST00000437811 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
HLA-DPA1-243ENST00000437811 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
HLA-DPA1-243ENST00000437811 PRAM1Q96QH2 718 aa18.68■□□□□ 0.58
HLA-DPA1-243ENST00000437811 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
HLA-DPA1-243ENST00000437811 PRKRIP1Q9H875 184 aaPredicted RBP18.66■□□□□ 0.58
HLA-DPA1-243ENST00000437811 POGKQ9P215 609 aa18.66■□□□□ 0.58
HLA-DPA1-243ENST00000437811 EVC2Q86UK5 1308 aa18.65■□□□□ 0.58
HLA-DPA1-243ENST00000437811 PUS7Q96PZ0 661 aaKnown RBP18.65■□□□□ 0.58
HLA-DPA1-243ENST00000437811 TBX22Q9Y458 520 aa18.65■□□□□ 0.58
HLA-DPA1-243ENST00000437811 SIRT1Q96EB6 747 aa18.64■□□□□ 0.57
HLA-DPA1-243ENST00000437811 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms