RNA–Protein interactions for RNA: ENST00000437768.1

CASC6-201, Transcript of cancer susceptibility 6, humanhuman

TSL 1 (best) BASIC

Gene CASC6, Length 733 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC6-201ENST00000437768 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
CASC6-201ENST00000437768 GNPATO15228 680 aa11.34□□□□□ -0.59
CASC6-201ENST00000437768 EYA1Q99502 592 aa11.34□□□□□ -0.59
CASC6-201ENST00000437768 GPR37O15354 613 aa11.33□□□□□ -0.6
CASC6-201ENST00000437768 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
CASC6-201ENST00000437768 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CASC6-201ENST00000437768 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
CASC6-201ENST00000437768 FECHP22830 423 aa11.31□□□□□ -0.6
CASC6-201ENST00000437768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
CASC6-201ENST00000437768 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
CASC6-201ENST00000437768 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
CASC6-201ENST00000437768 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
CASC6-201ENST00000437768 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
CASC6-201ENST00000437768 WRNQ14191 1432 aaPredicted RBP eCLIP11.29□□□□□ -0.6
CASC6-201ENST00000437768 RNF40O75150 1001 aa11.29□□□□□ -0.6
CASC6-201ENST00000437768 PPP4CP60510 307 aa11.29□□□□□ -0.6
CASC6-201ENST00000437768 OATP04181 439 aa11.28□□□□□ -0.6
CASC6-201ENST00000437768 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CASC6-201ENST00000437768 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
CASC6-201ENST00000437768 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
CASC6-201ENST00000437768 DNAJB2P25686 324 aa11.26□□□□□ -0.61
CASC6-201ENST00000437768 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
CASC6-201ENST00000437768 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
CASC6-201ENST00000437768 RCCD1A6NED2 376 aa11.25□□□□□ -0.61
CASC6-201ENST00000437768 NYAP1Q6ZVC0 841 aa11.25□□□□□ -0.61
CASC6-201ENST00000437768 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
CASC6-201ENST00000437768 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
CASC6-201ENST00000437768 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
CASC6-201ENST00000437768 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
CASC6-201ENST00000437768 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
CASC6-201ENST00000437768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
CASC6-201ENST00000437768 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
CASC6-201ENST00000437768 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
CASC6-201ENST00000437768 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
CASC6-201ENST00000437768 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
CASC6-201ENST00000437768 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
CASC6-201ENST00000437768 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
CASC6-201ENST00000437768 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
CASC6-201ENST00000437768 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
CASC6-201ENST00000437768 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
CASC6-201ENST00000437768 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
CASC6-201ENST00000437768 IRF6O14896 467 aa11.14□□□□□ -0.63
CASC6-201ENST00000437768 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
CASC6-201ENST00000437768 APLP1P51693 650 aa11.14□□□□□ -0.63
CASC6-201ENST00000437768 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
CASC6-201ENST00000437768 SOGA1O94964 1423 aa11.13□□□□□ -0.63
CASC6-201ENST00000437768 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
CASC6-201ENST00000437768 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
CASC6-201ENST00000437768 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
CASC6-201ENST00000437768 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
CASC6-201ENST00000437768 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
CASC6-201ENST00000437768 KCNC4Q03721 635 aa11.11□□□□□ -0.63
CASC6-201ENST00000437768 BCANQ96GW7 911 aa11.11□□□□□ -0.63
CASC6-201ENST00000437768 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
CASC6-201ENST00000437768 SLC10A3P09131 477 aa11.1□□□□□ -0.63
CASC6-201ENST00000437768 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
CASC6-201ENST00000437768 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
CASC6-201ENST00000437768 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
CASC6-201ENST00000437768 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
CASC6-201ENST00000437768 ZMYND10O75800 440 aa11.09□□□□□ -0.63
CASC6-201ENST00000437768 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
CASC6-201ENST00000437768 CFHP08603 1231 aa11.08□□□□□ -0.64
CASC6-201ENST00000437768 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
CASC6-201ENST00000437768 MTRQ99707 1265 aa11.08□□□□□ -0.64
CASC6-201ENST00000437768 KIF21BO75037 1637 aa11.07□□□□□ -0.64
CASC6-201ENST00000437768 DDX11L8A8MPP1 907 aa11.07□□□□□ -0.64
CASC6-201ENST00000437768 TJAP1Q5JTD0 557 aa11.07□□□□□ -0.64
CASC6-201ENST00000437768 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
CASC6-201ENST00000437768 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
CASC6-201ENST00000437768 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
CASC6-201ENST00000437768 IL21Q9HBE4 155 aa11.06□□□□□ -0.64
CASC6-201ENST00000437768 COPS2P61201 443 aa11.05□□□□□ -0.64
CASC6-201ENST00000437768 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
CASC6-201ENST00000437768 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
CASC6-201ENST00000437768 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
CASC6-201ENST00000437768 SULF1Q8IWU6 871 aa11.04□□□□□ -0.64
CASC6-201ENST00000437768 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
CASC6-201ENST00000437768 ZNF516Q92618 1163 aa11.02□□□□□ -0.65
CASC6-201ENST00000437768 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
CASC6-201ENST00000437768 A0A0G2JS52 829 aa11.01□□□□□ -0.65
CASC6-201ENST00000437768 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
CASC6-201ENST00000437768 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
CASC6-201ENST00000437768 CLIP1P30622 1438 aa11□□□□□ -0.65
CASC6-201ENST00000437768 CLCN1P35523 988 aa10.98□□□□□ -0.65
CASC6-201ENST00000437768 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
CASC6-201ENST00000437768 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
CASC6-201ENST00000437768 ZPR1O75312 459 aa10.97□□□□□ -0.65
CASC6-201ENST00000437768 GCGRP47871 477 aa10.97□□□□□ -0.65
CASC6-201ENST00000437768 SYNJ1O43426 1573 aa10.97□□□□□ -0.65
CASC6-201ENST00000437768 ACIN1Q9UKV3 1341 aaKnown RBP10.96□□□□□ -0.65
CASC6-201ENST00000437768 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
CASC6-201ENST00000437768 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CASC6-201ENST00000437768 NR1I2O75469 434 aa10.94□□□□□ -0.66
CASC6-201ENST00000437768 CD46P15529 392 aa10.94□□□□□ -0.66
CASC6-201ENST00000437768 FUT2Q10981 343 aa10.94□□□□□ -0.66
CASC6-201ENST00000437768 TTLL12Q14166 644 aaPredicted RBP10.94□□□□□ -0.66
CASC6-201ENST00000437768 AK7Q96M32 723 aa10.94□□□□□ -0.66
CASC6-201ENST00000437768 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
CASC6-201ENST00000437768 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
CASC6-201ENST00000437768 ATP6V1AP38606 617 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms