RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 SLIT1O75093 1534 aa19.46■□□□□ 0.71
EXT1-203ENST00000437196 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
EXT1-203ENST00000437196 ARHGAP23Q9P227 1491 aa19.44■□□□□ 0.7
EXT1-203ENST00000437196 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
EXT1-203ENST00000437196 ANKLE2Q86XL3 938 aa19.43■□□□□ 0.7
EXT1-203ENST00000437196 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
EXT1-203ENST00000437196 PPP1R15AO75807 674 aaPredicted RBP19.42■□□□□ 0.7
EXT1-203ENST00000437196 PPLO60437 1756 aa19.41■□□□□ 0.7
EXT1-203ENST00000437196 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
EXT1-203ENST00000437196 ZFYVE9O95405 1425 aa19.41■□□□□ 0.7
EXT1-203ENST00000437196 NEXMIFQ5QGS0 1516 aa19.4■□□□□ 0.7
EXT1-203ENST00000437196 DCAF11Q8TEB1 546 aa19.4■□□□□ 0.7
EXT1-203ENST00000437196 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
EXT1-203ENST00000437196 IFT172Q9UG01 1749 aa19.39■□□□□ 0.69
EXT1-203ENST00000437196 HSPA2P54652 639 aa19.39■□□□□ 0.69
EXT1-203ENST00000437196 POLR1AO95602 1720 aaPredicted RBP19.38■□□□□ 0.69
EXT1-203ENST00000437196 L3MBTL2Q969R5 705 aa19.38■□□□□ 0.69
EXT1-203ENST00000437196 MYOM2P54296 1465 aa19.37■□□□□ 0.69
EXT1-203ENST00000437196 PLEKHG1Q9ULL1 1385 aa19.35■□□□□ 0.69
EXT1-203ENST00000437196 LTKP29376 864 aa19.34■□□□□ 0.69
EXT1-203ENST00000437196 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
EXT1-203ENST00000437196 MED14O60244 1454 aa19.34■□□□□ 0.69
EXT1-203ENST00000437196 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
EXT1-203ENST00000437196 NUTM2DQ5VT03 806 aaPredicted RBP19.33■□□□□ 0.68
EXT1-203ENST00000437196 BCANQ96GW7 911 aa19.33■□□□□ 0.68
EXT1-203ENST00000437196 NCKAP5LQ9HCH0 1330 aa19.31■□□□□ 0.68
EXT1-203ENST00000437196 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
EXT1-203ENST00000437196 NRXN1Q9ULB1 1477 aa19.3■□□□□ 0.68
EXT1-203ENST00000437196 ADGRF5Q8IZF2 1346 aa19.29■□□□□ 0.68
EXT1-203ENST00000437196 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
EXT1-203ENST00000437196 SETBP1Q9Y6X0 1596 aa19.29■□□□□ 0.68
EXT1-203ENST00000437196 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
EXT1-203ENST00000437196 PIK3C2GO75747 1445 aa19.29■□□□□ 0.68
EXT1-203ENST00000437196 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
EXT1-203ENST00000437196 DIP2AQ14689 1571 aa19.27■□□□□ 0.68
EXT1-203ENST00000437196 LAMC1P11047 1609 aa19.27■□□□□ 0.68
EXT1-203ENST00000437196 PRAG1Q86YV5 1406 aa19.27■□□□□ 0.68
EXT1-203ENST00000437196 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
EXT1-203ENST00000437196 KIAA1210Q9ULL0 1709 aa19.24■□□□□ 0.67
EXT1-203ENST00000437196 C14orf93Q9H972 538 aaKnown RBP19.24■□□□□ 0.67
EXT1-203ENST00000437196 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
EXT1-203ENST00000437196 NRXN3Q9Y4C0 1643 aa19.22■□□□□ 0.67
EXT1-203ENST00000437196 PIK3R4Q99570 1358 aa19.22■□□□□ 0.67
EXT1-203ENST00000437196 ADAMTS13Q76LX8 1427 aa19.21■□□□□ 0.67
EXT1-203ENST00000437196 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
EXT1-203ENST00000437196 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
EXT1-203ENST00000437196 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
EXT1-203ENST00000437196 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
EXT1-203ENST00000437196 TRPM1Q7Z4N2 1603 aa19.17■□□□□ 0.66
EXT1-203ENST00000437196 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
EXT1-203ENST00000437196 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
EXT1-203ENST00000437196 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
EXT1-203ENST00000437196 METP08581 1390 aa19.13■□□□□ 0.65
EXT1-203ENST00000437196 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
EXT1-203ENST00000437196 KCNA6P17658 529 aa19.12■□□□□ 0.65
EXT1-203ENST00000437196 GPRASP1Q5JY77 1395 aa19.12■□□□□ 0.65
EXT1-203ENST00000437196 ADGRB1O14514 1584 aa19.11■□□□□ 0.65
EXT1-203ENST00000437196 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
EXT1-203ENST00000437196 LRPPRCP42704 1394 aaKnown RBP19.11■□□□□ 0.65
EXT1-203ENST00000437196 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
EXT1-203ENST00000437196 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
EXT1-203ENST00000437196 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
EXT1-203ENST00000437196 YTHDC2Q9H6S0 1430 aaKnown RBP19.1■□□□□ 0.65
EXT1-203ENST00000437196 ABCC11Q96J66 1382 aa19.09■□□□□ 0.65
EXT1-203ENST00000437196 NWD1Q149M9 1564 aa19.09■□□□□ 0.65
EXT1-203ENST00000437196 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.65
EXT1-203ENST00000437196 EIF3AQ14152 1382 aaKnown RBP19.07■□□□□ 0.64
EXT1-203ENST00000437196 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
EXT1-203ENST00000437196 NKTRP30414 1462 aaKnown RBP19.07■□□□□ 0.64
EXT1-203ENST00000437196 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
EXT1-203ENST00000437196 STK26Q9P289 416 aa19.07■□□□□ 0.64
EXT1-203ENST00000437196 TECPR2O15040 1411 aa19.06■□□□□ 0.64
EXT1-203ENST00000437196 XRN1Q8IZH2 1706 aaKnown RBP19.06■□□□□ 0.64
EXT1-203ENST00000437196 PTCH1Q13635 1447 aa19.05■□□□□ 0.64
EXT1-203ENST00000437196 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
EXT1-203ENST00000437196 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
EXT1-203ENST00000437196 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
EXT1-203ENST00000437196 CPS1P31327 1500 aa19.05■□□□□ 0.64
EXT1-203ENST00000437196 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
EXT1-203ENST00000437196 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
EXT1-203ENST00000437196 POGKQ9P215 609 aa19.01■□□□□ 0.63
EXT1-203ENST00000437196 SLC24A1O60721 1099 aa19■□□□□ 0.63
EXT1-203ENST00000437196 PROSER2Q86WR7 435 aaPredicted RBP19■□□□□ 0.63
EXT1-203ENST00000437196 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
EXT1-203ENST00000437196 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
EXT1-203ENST00000437196 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
EXT1-203ENST00000437196 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
EXT1-203ENST00000437196 USP47Q96K76 1375 aa18.98■□□□□ 0.63
EXT1-203ENST00000437196 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
EXT1-203ENST00000437196 PRAM1Q96QH2 718 aa18.98■□□□□ 0.63
EXT1-203ENST00000437196 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
EXT1-203ENST00000437196 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
EXT1-203ENST00000437196 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
EXT1-203ENST00000437196 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
EXT1-203ENST00000437196 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
EXT1-203ENST00000437196 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
EXT1-203ENST00000437196 SBNO2Q9Y2G9 1366 aa18.92■□□□□ 0.62
EXT1-203ENST00000437196 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
EXT1-203ENST00000437196 QRICH2Q9H0J4 1663 aa18.91■□□□□ 0.62
EXT1-203ENST00000437196 SAFB2Q14151 953 aaKnown RBP eCLIP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms