RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 TRIM6-TRIM34B2RNG4 842 aa8.38□□□□□ -1.07
NCL-204ENST00000436894 EYA1Q99502 592 aa8.38□□□□□ -1.07
NCL-204ENST00000436894 RCCD1A6NED2 376 aa8.37□□□□□ -1.07
NCL-204ENST00000436894 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
NCL-204ENST00000436894 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
NCL-204ENST00000436894 EMP3P54852 163 aa8.36□□□□□ -1.07
NCL-204ENST00000436894 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
NCL-204ENST00000436894 TATDN2Q93075 761 aa8.36□□□□□ -1.07
NCL-204ENST00000436894 FAM163AQ96GL9 167 aaPredicted RBP8.36□□□□□ -1.07
NCL-204ENST00000436894 PNMA3Q9UL41 463 aa8.36□□□□□ -1.07
NCL-204ENST00000436894 CFTRP13569 1480 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 POTEB3A0JP26 581 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 FAM205CA6NFA0 338 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 POTEBQ6S5H4 581 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
NCL-204ENST00000436894 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
NCL-204ENST00000436894 RIMBP3CA6NJZ7 1639 aa8.33□□□□□ -1.08
NCL-204ENST00000436894 RIMBP3BA6NNM3 1639 aa8.33□□□□□ -1.08
NCL-204ENST00000436894 RIMBP3Q9UFD9 1639 aa8.33□□□□□ -1.08
NCL-204ENST00000436894 POTEMA6NI47 508 aa8.33□□□□□ -1.08
NCL-204ENST00000436894 PACS2Q86VP3 889 aa8.33□□□□□ -1.08
NCL-204ENST00000436894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.32□□□□□ -1.08
NCL-204ENST00000436894 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
NCL-204ENST00000436894 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
NCL-204ENST00000436894 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
NCL-204ENST00000436894 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
NCL-204ENST00000436894 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
NCL-204ENST00000436894 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
NCL-204ENST00000436894 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
NCL-204ENST00000436894 KCNH8Q96L42 1107 aa8.3□□□□□ -1.08
NCL-204ENST00000436894 WIZO95785 1651 aa8.3□□□□□ -1.08
NCL-204ENST00000436894 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
NCL-204ENST00000436894 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
NCL-204ENST00000436894 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
NCL-204ENST00000436894 DNAJB2P25686 324 aa8.29□□□□□ -1.08
NCL-204ENST00000436894 HS3ST6Q96QI5 342 aa8.29□□□□□ -1.08
NCL-204ENST00000436894 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
NCL-204ENST00000436894 IFT140Q96RY7 1462 aa8.28□□□□□ -1.08
NCL-204ENST00000436894 CYB5RLQ6IPT4 315 aa8.28□□□□□ -1.08
NCL-204ENST00000436894 ZNF687Q8N1G0 1237 aa8.28□□□□□ -1.08
NCL-204ENST00000436894 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
NCL-204ENST00000436894 POLR3EQ9NVU0 708 aa8.28□□□□□ -1.08
NCL-204ENST00000436894 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
NCL-204ENST00000436894 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
NCL-204ENST00000436894 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
NCL-204ENST00000436894 TBC1D2Q9BYX2 928 aa8.27□□□□□ -1.09
NCL-204ENST00000436894 GOPCQ9HD26 462 aa8.27□□□□□ -1.09
NCL-204ENST00000436894 VPS9D1Q9Y2B5 631 aa8.27□□□□□ -1.09
NCL-204ENST00000436894 CD46P15529 392 aa8.26□□□□□ -1.09
NCL-204ENST00000436894 RABGEF1Q9UJ41 708 aa8.26□□□□□ -1.09
NCL-204ENST00000436894 SWT1Q5T5J6 900 aaKnown RBP8.25□□□□□ -1.09
NCL-204ENST00000436894 FBXO31Q5XUX0 539 aaPredicted RBP8.25□□□□□ -1.09
NCL-204ENST00000436894 PCMTD1Q96MG8 357 aaPredicted RBP8.25□□□□□ -1.09
NCL-204ENST00000436894 ABCC8Q09428 1581 aa8.25□□□□□ -1.09
NCL-204ENST00000436894 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
NCL-204ENST00000436894 SPIRE2Q8WWL2 714 aa8.24□□□□□ -1.09
NCL-204ENST00000436894 PBX2P40425 430 aa8.23□□□□□ -1.09
NCL-204ENST00000436894 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
NCL-204ENST00000436894 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
NCL-204ENST00000436894 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
NCL-204ENST00000436894 RSF1Q96T23 1441 aaPredicted RBP8.22□□□□□ -1.09
NCL-204ENST00000436894 SLC10A3P09131 477 aa8.22□□□□□ -1.09
NCL-204ENST00000436894 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
NCL-204ENST00000436894 RSPH6AQ9H0K4 717 aa8.22□□□□□ -1.09
NCL-204ENST00000436894 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
NCL-204ENST00000436894 PRDM2Q13029 1718 aa8.22□□□□□ -1.09
NCL-204ENST00000436894 TOP2AP11388 1531 aaKnown RBP8.22□□□□□ -1.09
NCL-204ENST00000436894 ZNF608Q9ULD9 1512 aaPredicted RBP8.22□□□□□ -1.09
NCL-204ENST00000436894 BHMG1C9JSJ3 638 aaPredicted RBP8.21□□□□□ -1.1
NCL-204ENST00000436894 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
NCL-204ENST00000436894 NDUFV2P19404 249 aa8.2□□□□□ -1.1
NCL-204ENST00000436894 FAM98CQ17RN3 349 aaKnown RBP8.2□□□□□ -1.1
NCL-204ENST00000436894 SAMD7Q7Z3H4 446 aa8.2□□□□□ -1.1
NCL-204ENST00000436894 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
NCL-204ENST00000436894 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
NCL-204ENST00000436894 CSPP1Q1MSJ5 1256 aa8.19□□□□□ -1.1
NCL-204ENST00000436894 PCDH10Q9P2E7 1040 aa8.19□□□□□ -1.1
NCL-204ENST00000436894 TOPBP1Q92547 1522 aa8.19□□□□□ -1.1
NCL-204ENST00000436894 LSM11P83369 360 aaKnown RBP eCLIP8.18□□□□□ -1.1
NCL-204ENST00000436894 ADGRD1Q6QNK2 874 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 HLA-CQ95604 372 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
NCL-204ENST00000436894 GCGRP47871 477 aa8.17□□□□□ -1.1
NCL-204ENST00000436894 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
NCL-204ENST00000436894 EIF4G3O43432 1585 aaKnown RBP8.17□□□□□ -1.1
NCL-204ENST00000436894 SUPT5HO00267 1087 aaKnown RBP8.16□□□□□ -1.1
NCL-204ENST00000436894 RNF40O75150 1001 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 KDM4AO75164 1064 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 QPCTQ16769 361 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
NCL-204ENST00000436894 ANKRD13DQ6ZTN6 518 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 ZFRQ96KR1 1074 aaKnown RBP8.16□□□□□ -1.1
NCL-204ENST00000436894 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
NCL-204ENST00000436894 TK2O00142 265 aa8.15□□□□□ -1.1
NCL-204ENST00000436894 HRO43593 1189 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms