RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 NPC1L1Q9UHC9 1359 aa20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 KNSTRNQ9Y448 316 aa20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 BLMP54132 1417 aaPredicted RBP20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 KIDINS220Q9ULH0 1771 aa20.99■□□□□ 0.95
RBFOX1-205ENST00000436368 HECW2Q9P2P5 1572 aa20.97■□□□□ 0.95
RBFOX1-205ENST00000436368 NEO1Q92859 1461 aa20.97■□□□□ 0.95
RBFOX1-205ENST00000436368 KIF1BO60333 1816 aa20.96■□□□□ 0.95
RBFOX1-205ENST00000436368 PPRC1Q5VV67 1664 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 KDM5AP29375 1690 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 CC2D1BQ5T0F9 858 aaKnown RBP20.94■□□□□ 0.94
RBFOX1-205ENST00000436368 FANCIQ9NVI1 1328 aa20.93■□□□□ 0.94
RBFOX1-205ENST00000436368 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
RBFOX1-205ENST00000436368 SETBP1Q9Y6X0 1596 aa20.92■□□□□ 0.94
RBFOX1-205ENST00000436368 RPGRIP1LQ68CZ1 1315 aa20.92■□□□□ 0.94
RBFOX1-205ENST00000436368 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
RBFOX1-205ENST00000436368 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
RBFOX1-205ENST00000436368 CCDC136Q96JN2 1154 aa20.9■□□□□ 0.94
RBFOX1-205ENST00000436368 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
RBFOX1-205ENST00000436368 MYO3AQ8NEV4 1616 aa20.89■□□□□ 0.93
RBFOX1-205ENST00000436368 WDR43Q15061 677 aaKnown RBP eCLIP20.88■□□□□ 0.93
RBFOX1-205ENST00000436368 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
RBFOX1-205ENST00000436368 RCAN3Q9UKA8 241 aa20.88■□□□□ 0.93
RBFOX1-205ENST00000436368 RRP1P56182 461 aaKnown RBP20.87■□□□□ 0.93
RBFOX1-205ENST00000436368 ANP32EQ9BTT0 268 aa20.87■□□□□ 0.93
RBFOX1-205ENST00000436368 FRMPD1Q5SYB0 1578 aa20.85■□□□□ 0.93
RBFOX1-205ENST00000436368 ABCC3O15438 1527 aa20.84■□□□□ 0.93
RBFOX1-205ENST00000436368 AMER1Q5JTC6 1135 aaPredicted RBP20.83■□□□□ 0.93
RBFOX1-205ENST00000436368 PPP2R1AP30153 589 aa20.83■□□□□ 0.92
RBFOX1-205ENST00000436368 NGEFQ8N5V2 710 aa20.83■□□□□ 0.92
RBFOX1-205ENST00000436368 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.92
RBFOX1-205ENST00000436368 MYOM1P52179 1685 aa20.82■□□□□ 0.92
RBFOX1-205ENST00000436368 NPATQ14207 1427 aa20.82■□□□□ 0.92
RBFOX1-205ENST00000436368 ZC3H13Q5T200 1668 aaKnown RBP20.82■□□□□ 0.92
RBFOX1-205ENST00000436368 ERVK-7P63135 1459 aa20.81■□□□□ 0.92
RBFOX1-205ENST00000436368 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
RBFOX1-205ENST00000436368 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
RBFOX1-205ENST00000436368 CENPJQ9HC77 1338 aaPredicted RBP20.8■□□□□ 0.92
RBFOX1-205ENST00000436368 NOS1P29475 1434 aa20.8■□□□□ 0.92
RBFOX1-205ENST00000436368 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
RBFOX1-205ENST00000436368 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
RBFOX1-205ENST00000436368 CAMSAP1Q5T5Y3 1602 aa20.78■□□□□ 0.92
RBFOX1-205ENST00000436368 PPLO60437 1756 aa20.76■□□□□ 0.91
RBFOX1-205ENST00000436368 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
RBFOX1-205ENST00000436368 PUS7Q96PZ0 661 aaKnown RBP20.75■□□□□ 0.91
RBFOX1-205ENST00000436368 DIP2CQ9Y2E4 1556 aa20.75■□□□□ 0.91
RBFOX1-205ENST00000436368 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
RBFOX1-205ENST00000436368 GGT6Q6P531 493 aa20.74■□□□□ 0.91
RBFOX1-205ENST00000436368 C14orf93Q9H972 538 aaKnown RBP20.74■□□□□ 0.91
RBFOX1-205ENST00000436368 GLI2P10070 1586 aa20.73■□□□□ 0.91
RBFOX1-205ENST00000436368 VGFO15240 615 aaPredicted RBP20.73■□□□□ 0.91
RBFOX1-205ENST00000436368 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
RBFOX1-205ENST00000436368 ADAMTS8Q9UP79 889 aa20.72■□□□□ 0.91
RBFOX1-205ENST00000436368 PIK3C2BO00750 1634 aa20.72■□□□□ 0.91
RBFOX1-205ENST00000436368 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
RBFOX1-205ENST00000436368 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
RBFOX1-205ENST00000436368 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
RBFOX1-205ENST00000436368 SLC52A1Q9NWF4 448 aa20.68■□□□□ 0.9
RBFOX1-205ENST00000436368 USP32Q8NFA0 1604 aa20.68■□□□□ 0.9
RBFOX1-205ENST00000436368 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
RBFOX1-205ENST00000436368 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
RBFOX1-205ENST00000436368 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
RBFOX1-205ENST00000436368 NSD2O96028 1365 aa20.66■□□□□ 0.9
RBFOX1-205ENST00000436368 RICTORQ6R327 1708 aa20.66■□□□□ 0.9
RBFOX1-205ENST00000436368 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
RBFOX1-205ENST00000436368 TCERG1O14776 1098 aaKnown RBP20.65■□□□□ 0.9
RBFOX1-205ENST00000436368 EVC2Q86UK5 1308 aa20.64■□□□□ 0.89
RBFOX1-205ENST00000436368 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
RBFOX1-205ENST00000436368 EXOC6Q8TAG9 804 aa20.63■□□□□ 0.89
RBFOX1-205ENST00000436368 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
RBFOX1-205ENST00000436368 ZNF521Q96K83 1311 aa20.63■□□□□ 0.89
RBFOX1-205ENST00000436368 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
RBFOX1-205ENST00000436368 MS4A1P11836 297 aa20.62■□□□□ 0.89
RBFOX1-205ENST00000436368 ANP32AP39687 249 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-205ENST00000436368 NSD3Q9BZ95 1437 aa20.62■□□□□ 0.89
RBFOX1-205ENST00000436368 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
RBFOX1-205ENST00000436368 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
RBFOX1-205ENST00000436368 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
RBFOX1-205ENST00000436368 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
RBFOX1-205ENST00000436368 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
RBFOX1-205ENST00000436368 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
RBFOX1-205ENST00000436368 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
RBFOX1-205ENST00000436368 E9PSI1 815 aa20.58■□□□□ 0.89
RBFOX1-205ENST00000436368 REREQ9P2R6 1566 aa20.58■□□□□ 0.89
RBFOX1-205ENST00000436368 DUSP27Q5VZP5 1158 aa20.57■□□□□ 0.88
RBFOX1-205ENST00000436368 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
RBFOX1-205ENST00000436368 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
RBFOX1-205ENST00000436368 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
RBFOX1-205ENST00000436368 SLFN5Q08AF3 891 aa20.56■□□□□ 0.88
RBFOX1-205ENST00000436368 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-205ENST00000436368 SIGLEC1Q9BZZ2 1709 aa20.55■□□□□ 0.88
RBFOX1-205ENST00000436368 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
RBFOX1-205ENST00000436368 PREX1Q8TCU6 1659 aa20.52■□□□□ 0.88
RBFOX1-205ENST00000436368 AGLP35573 1532 aa20.52■□□□□ 0.88
RBFOX1-205ENST00000436368 ATAD2Q6PL18 1390 aa20.52■□□□□ 0.88
RBFOX1-205ENST00000436368 YEATS2Q9ULM3 1422 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms